Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01644:Ptov1'

102591

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Ptov1

Ensembl Gene

ENSMUSG00000038502

Gene Name

prostate tumor over expressed gene 1

Synonyms

Gcap3, 1110030G05Rik

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.281) question?

Stock #

IGL01644

Quality Score

Status

Chromosome

Chromosomal Location

44512491-44519212 bp(-) (GRCm39)

Type of Mutation

nonsense

DNA Base Change (assembly)

C to A at 44516926 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Stop codon at position 37 (E37*)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000003044] [ENSMUST00000046575] [ENSMUST00000098478] [ENSMUST00000107876] [ENSMUST00000123015] [ENSMUST00000207363] [ENSMUST00000155050] [ENSMUST00000201882] [ENSMUST00000200892] [ENSMUST00000202646] [ENSMUST00000209018]

AlphaFold

Q91VU8

Predicted Effect

probably benign
Transcript: ENSMUST00000003044

SMART Domains

Protein: ENSMUSP00000003044
Gene: ENSMUSG00000002963

Domain	Start	End	E-Value	Type
PDB:1YJM\|C	1	110	4e-62	PDB
SCOP:d1lgpa_	8	114	5e-12	SMART
Blast:FHA	31	74	1e-10	BLAST
low complexity region	116	134	N/A	INTRINSIC
Pfam:PNK3P	165	327	9.3e-58	PFAM
low complexity region	350	364	N/A	INTRINSIC
Pfam:AAA_33	366	488	1.6e-17	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000046575
AA Change: R61L

PolyPhen 2 Score 0.185 (Sensitivity: 0.92; Specificity: 0.87)

SMART Domains

Protein: ENSMUSP00000035281
Gene: ENSMUSG00000038502
AA Change: R61L

Domain	Start	End	E-Value	Type
low complexity region	10	50	N/A	INTRINSIC
low complexity region	64	82	N/A	INTRINSIC
Pfam:Med25	89	238	1.7e-58	PFAM
Pfam:Med25	254	399	4.2e-57	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000098478

SMART Domains

Protein: ENSMUSP00000096078
Gene: ENSMUSG00000002963

Domain	Start	End	E-Value	Type
PDB:1YJM\|C	1	110	2e-62	PDB
SCOP:d1lgpa_	8	114	5e-12	SMART
Blast:FHA	31	74	1e-10	BLAST
low complexity region	116	134	N/A	INTRINSIC
Pfam:PNK3P	165	220	2.9e-16	PFAM
Pfam:PNK3P	211	291	5.3e-27	PFAM
low complexity region	314	328	N/A	INTRINSIC
Pfam:AAA_33	330	452	5.6e-26	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000107876

SMART Domains

Protein: ENSMUSP00000103508
Gene: ENSMUSG00000002963

Domain	Start	End	E-Value	Type
PDB:1YJM\|C	1	110	4e-62	PDB
SCOP:d1lgpa_	8	114	5e-12	SMART
Blast:FHA	31	74	1e-10	BLAST
low complexity region	116	134	N/A	INTRINSIC
Pfam:PNK3P	165	327	1.9e-57	PFAM
low complexity region	350	364	N/A	INTRINSIC
Pfam:AAA_33	366	488	5.9e-26	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000123015

SMART Domains

Protein: ENSMUSP00000143862
Gene: ENSMUSG00000002963

Domain	Start	End	E-Value	Type
PDB:1YJ5\|C	1	143	8e-72	PDB
SCOP:d1lgpa_	8	114	7e-13	SMART
Blast:FHA	31	74	2e-10	BLAST
PDB:3U7G\|A	144	165	7e-6	PDB

Predicted Effect

probably null
Transcript: ENSMUST00000123936
AA Change: E37*

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000144669

Predicted Effect

unknown
Transcript: ENSMUST00000208682
AA Change: R22L

Predicted Effect

probably benign
Transcript: ENSMUST00000208410

Predicted Effect

probably benign
Transcript: ENSMUST00000207416

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000145850

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000208655

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000208687

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000207303

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000207393

Predicted Effect

probably benign
Transcript: ENSMUST00000208385

Predicted Effect

probably benign
Transcript: ENSMUST00000207363

Predicted Effect

probably benign
Transcript: ENSMUST00000155050

SMART Domains

Protein: ENSMUSP00000144663
Gene: ENSMUSG00000002963

Domain	Start	End	E-Value	Type
PDB:1YJM\|C	1	50	9e-30	PDB

Predicted Effect

probably benign
Transcript: ENSMUST00000201882

SMART Domains

Protein: ENSMUSP00000144690
Gene: ENSMUSG00000002963

Domain	Start	End	E-Value	Type
PDB:1YJM\|C	1	110	6e-63	PDB
SCOP:d1lgpa_	8	114	3e-12	SMART
Blast:FHA	31	74	2e-10	BLAST
low complexity region	116	134	N/A	INTRINSIC
Pfam:PNK3P	165	327	9.9e-55	PFAM
low complexity region	350	364	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000200892

SMART Domains

Protein: ENSMUSP00000144163
Gene: ENSMUSG00000002963

Domain	Start	End	E-Value	Type
Pfam:AAA_33	18	100	3.9e-9	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000202646

SMART Domains

Protein: ENSMUSP00000144484
Gene: ENSMUSG00000002963

Domain	Start	End	E-Value	Type
Pfam:AAA_33	5	44	6.1e-7	PFAM
Pfam:AAA_33	37	117	4.2e-9	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000209139

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000208991

Predicted Effect

probably benign
Transcript: ENSMUST00000209018

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000208765

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000209003

Coding Region Coverage

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a protein that was found to be overexpressed in prostate adenocarcinomas. The encoded protein was found to interact with the lipid raft protein flotillin-1 and shuttle it from the cytoplasm to the nucleus in a cell cycle dependent manner. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Feb 2015]

Allele List at MGI

Other mutations in this stock

Total: 21 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Atg16l2	A	G	7: 100,946,424 (GRCm39)	*82R	probably null	Het
Crb1	T	A	1: 139,165,368 (GRCm39)	R919*	probably null	Het
Csf1	T	C	3: 107,661,158 (GRCm39)	T120A	possibly damaging	Het
Defa29	A	T	8: 21,816,137 (GRCm39)	C77S	possibly damaging	Het
Defb7	A	T	8: 19,547,717 (GRCm39)		probably benign	Het
Ece2	T	C	16: 20,436,616 (GRCm39)	V146A	possibly damaging	Het
Efcab6	T	A	15: 83,917,273 (GRCm39)	S96C	probably damaging	Het
Gm7729	T	C	18: 27,731,872 (GRCm39)		noncoding transcript	Het
Hapln2	G	T	3: 87,929,944 (GRCm39)	R311S	probably damaging	Het
Impg2	C	T	16: 56,080,233 (GRCm39)	P679L	probably benign	Het
Kansl1l	A	G	1: 66,840,475 (GRCm39)	I275T	probably benign	Het
Med29	A	G	7: 28,090,272 (GRCm39)	F108L	probably damaging	Het
Nrxn1	C	T	17: 90,928,301 (GRCm39)	C789Y	possibly damaging	Het
Or10w1	A	T	19: 13,632,768 (GRCm39)		probably benign	Het
Or4c123	T	C	2: 89,126,976 (GRCm39)	I213V	probably benign	Het
Palld	T	C	8: 62,330,512 (GRCm39)	K122E	probably benign	Het
Ppl	A	T	16: 4,909,719 (GRCm39)	L864H	probably damaging	Het
Sspo	T	C	6: 48,429,436 (GRCm39)	V482A	probably benign	Het
St7l	C	T	3: 104,826,772 (GRCm39)	R377*	probably null	Het
Ttn	G	T	2: 76,585,727 (GRCm39)	P13643T	probably damaging	Het
Vcan	T	A	13: 89,836,794 (GRCm39)	T2917S	probably benign	Het

Other mutations in Ptov1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02217:Ptov1	APN	7	44,516,900 (GRCm39)	missense	probably damaging	1.00
R0304:Ptov1	UTSW	7	44,512,873 (GRCm39)	splice site	probably null
R0335:Ptov1	UTSW	7	44,514,046 (GRCm39)	missense	possibly damaging	0.80
R0470:Ptov1	UTSW	7	44,514,235 (GRCm39)	missense	probably damaging	0.96
R0787:Ptov1	UTSW	7	44,514,894 (GRCm39)	critical splice donor site	probably null
R1844:Ptov1	UTSW	7	44,514,991 (GRCm39)	missense	possibly damaging	0.95
R2185:Ptov1	UTSW	7	44,516,707 (GRCm39)	unclassified	probably benign
R3005:Ptov1	UTSW	7	44,513,886 (GRCm39)	missense	probably damaging	0.99
R4460:Ptov1	UTSW	7	44,515,000 (GRCm39)	missense	probably benign	0.01
R4731:Ptov1	UTSW	7	44,516,533 (GRCm39)	missense	probably benign	0.23
R4732:Ptov1	UTSW	7	44,516,533 (GRCm39)	missense	probably benign	0.23
R4733:Ptov1	UTSW	7	44,516,533 (GRCm39)	missense	probably benign	0.23
R5063:Ptov1	UTSW	7	44,515,026 (GRCm39)	missense	possibly damaging	0.52
R5356:Ptov1	UTSW	7	44,514,089 (GRCm39)	missense	probably damaging	0.97
R5391:Ptov1	UTSW	7	44,513,008 (GRCm39)	missense	probably damaging	0.98
R7998:Ptov1	UTSW	7	44,514,353 (GRCm39)	missense	probably damaging	0.98
R9013:Ptov1	UTSW	7	44,514,985 (GRCm39)	missense	possibly damaging	0.79

Posted On

2014-01-21