Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01656:Vmn2r1'

103011

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Vmn2r1

Ensembl Gene

ENSMUSG00000027824

Gene Name

vomeronasal 2, receptor 1

Synonyms

V2r83, EG56544

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.111) question?

Stock #

IGL01656

Quality Score

Status

Chromosome

Chromosomal Location

63988968-64016905 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 63989274 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 71 (E71G)

Ref Sequence

ENSEMBL: ENSMUSP00000029406 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000029406]

AlphaFold

no structure available at present

Predicted Effect

probably damaging
Transcript: ENSMUST00000029406
AA Change: E71G

PolyPhen 2 Score 0.965 (Sensitivity: 0.78; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000029406
Gene: ENSMUSG00000027824
AA Change: E71G

Domain	Start	End	E-Value	Type
signal peptide	1	21	N/A	INTRINSIC
Pfam:ANF_receptor	86	504	6e-92	PFAM
Pfam:NCD3G	546	599	2.4e-17	PFAM
Pfam:7tm_3	632	866	4.1e-48	PFAM

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 46 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acrbp	A	C	6: 125,030,675 (GRCm39)	E232A	possibly damaging	Het
Anapc11	T	A	11: 120,490,173 (GRCm39)	F30I	possibly damaging	Het
Ap5z1	A	G	5: 142,456,069 (GRCm39)	D318G	probably benign	Het
Cfap43	T	C	19: 47,740,339 (GRCm39)	E1278G	possibly damaging	Het
Cylc1	A	G	X: 110,167,485 (GRCm39)	T589A	probably benign	Het
Dcaf15	T	C	8: 84,824,617 (GRCm39)	I527V	probably benign	Het
Ddhd2	C	T	8: 26,217,739 (GRCm39)	V713I	probably benign	Het
Edc4	T	C	8: 106,613,009 (GRCm39)	V283A	possibly damaging	Het
Elf5	A	G	2: 103,273,206 (GRCm39)		probably benign	Het
Flnb	C	T	14: 7,902,010 (GRCm38)		probably benign	Het
Flnc	C	T	6: 29,443,507 (GRCm39)		probably benign	Het
Fstl4	T	C	11: 52,891,201 (GRCm39)	L113P	probably damaging	Het
Gemin4	C	T	11: 76,104,636 (GRCm39)	V42M	probably damaging	Het
Gm10076	A	G	14: 105,919,354 (GRCm39)		noncoding transcript	Het
Grina	A	G	15: 76,132,501 (GRCm39)	Y116C	probably damaging	Het
Hectd4	T	A	5: 121,460,763 (GRCm39)	L914H	probably damaging	Het
Il17re	T	C	6: 113,439,934 (GRCm39)		probably benign	Het
Ivl	G	A	3: 92,478,962 (GRCm39)	Q368*	probably null	Het
Kbtbd8	A	G	6: 95,095,657 (GRCm39)	H73R	probably benign	Het
Krt90	T	A	15: 101,463,878 (GRCm39)	Q392L	probably damaging	Het
Magea3	A	T	X: 153,732,137 (GRCm39)	M122K	probably damaging	Het
Mapk8ip3	T	C	17: 25,137,003 (GRCm39)	D237G	probably damaging	Het
Nln	T	C	13: 104,198,249 (GRCm39)		probably null	Het
Nlrp4d	T	C	7: 10,098,074 (GRCm39)	Y853C	noncoding transcript	Het
Nol11	T	C	11: 107,079,998 (GRCm39)	D29G	probably benign	Het
Nr3c2	C	T	8: 77,914,166 (GRCm39)	L791F	probably damaging	Het
Nup50l	A	G	6: 96,142,675 (GRCm39)	V123A	possibly damaging	Het
Olfm3	T	C	3: 114,916,282 (GRCm39)	Y385H	probably damaging	Het
Or14j5	C	T	17: 38,162,029 (GRCm39)	P182L	possibly damaging	Het
Or51a8	A	G	7: 102,550,472 (GRCm39)	I299M	possibly damaging	Het
Or5b119	G	A	19: 13,457,454 (GRCm39)	A36V	probably benign	Het
Pklr	G	T	3: 89,052,302 (GRCm39)	G505C	probably damaging	Het
Plxna2	A	G	1: 194,472,469 (GRCm39)	E1071G	possibly damaging	Het
Prkcq	G	T	2: 11,231,766 (GRCm39)	A30S	probably damaging	Het
Rilpl1	A	G	5: 124,641,712 (GRCm39)	F104L	probably damaging	Het
Rsph6a	C	T	7: 18,788,770 (GRCm39)	T34I	probably benign	Het
Sec23ip	C	T	7: 128,351,969 (GRCm39)	P12L	probably damaging	Het
Slc25a21	A	C	12: 56,785,280 (GRCm39)	V199G	probably damaging	Het
Smc1b	T	C	15: 84,998,977 (GRCm39)	E483G	probably damaging	Het
Sucnr1	T	C	3: 59,993,832 (GRCm39)	M120T	possibly damaging	Het
Tas2r116	T	C	6: 132,832,396 (GRCm39)		probably benign	Het
Tbrg4	T	A	11: 6,568,522 (GRCm39)	Q419L	possibly damaging	Het
Tc2n	A	G	12: 101,615,348 (GRCm39)		probably benign	Het
Tgfbr2	A	C	9: 115,938,737 (GRCm39)	S388R	probably damaging	Het
Xpc	A	T	6: 91,482,449 (GRCm39)	I176K	probably damaging	Het
Xylt1	G	T	7: 117,148,228 (GRCm39)	R264L	probably damaging	Het

Other mutations in Vmn2r1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00233:Vmn2r1	APN	3	64,012,389 (GRCm39)	nonsense	probably null
IGL00335:Vmn2r1	APN	3	64,012,809 (GRCm39)	missense	probably damaging	0.96
IGL01509:Vmn2r1	APN	3	64,010,466 (GRCm39)	missense	probably benign	0.03
IGL01641:Vmn2r1	APN	3	64,011,924 (GRCm39)	missense	probably benign	0.19
IGL01927:Vmn2r1	APN	3	63,989,105 (GRCm39)	missense	probably benign	0.01
IGL02093:Vmn2r1	APN	3	64,012,130 (GRCm39)	missense	probably benign
IGL02146:Vmn2r1	APN	3	64,012,104 (GRCm39)	missense	probably benign	0.39
IGL02186:Vmn2r1	APN	3	63,989,138 (GRCm39)	missense	probably benign	0.01
IGL02320:Vmn2r1	APN	3	63,989,180 (GRCm39)	missense	possibly damaging	0.61
IGL02423:Vmn2r1	APN	3	63,997,665 (GRCm39)	missense	probably benign	0.00
IGL02709:Vmn2r1	APN	3	64,012,355 (GRCm39)	missense	probably benign	0.24
R0034:Vmn2r1	UTSW	3	63,997,435 (GRCm39)	missense	probably damaging	1.00
R0064:Vmn2r1	UTSW	3	64,012,209 (GRCm39)	missense	possibly damaging	0.76
R0152:Vmn2r1	UTSW	3	63,989,240 (GRCm39)	missense	possibly damaging	0.92
R0305:Vmn2r1	UTSW	3	63,997,087 (GRCm39)	missense	probably damaging	1.00
R0314:Vmn2r1	UTSW	3	63,993,980 (GRCm39)	missense	probably damaging	1.00
R0317:Vmn2r1	UTSW	3	63,989,240 (GRCm39)	missense	possibly damaging	0.92
R0465:Vmn2r1	UTSW	3	63,989,180 (GRCm39)	missense	possibly damaging	0.61
R1144:Vmn2r1	UTSW	3	63,997,541 (GRCm39)	missense	probably damaging	1.00
R1163:Vmn2r1	UTSW	3	63,994,046 (GRCm39)	missense	probably benign	0.03
R1448:Vmn2r1	UTSW	3	64,008,734 (GRCm39)	missense	probably damaging	1.00
R1491:Vmn2r1	UTSW	3	63,997,034 (GRCm39)	missense	probably damaging	1.00
R1543:Vmn2r1	UTSW	3	63,996,994 (GRCm39)	missense	probably damaging	1.00
R1611:Vmn2r1	UTSW	3	64,011,958 (GRCm39)	nonsense	probably null
R1676:Vmn2r1	UTSW	3	63,997,603 (GRCm39)	nonsense	probably null
R1727:Vmn2r1	UTSW	3	63,989,163 (GRCm39)	missense	probably benign
R1851:Vmn2r1	UTSW	3	64,008,926 (GRCm39)	missense	probably benign	0.32
R3080:Vmn2r1	UTSW	3	63,997,205 (GRCm39)	missense	probably damaging	1.00
R3790:Vmn2r1	UTSW	3	63,994,185 (GRCm39)	critical splice donor site	probably null
R4111:Vmn2r1	UTSW	3	63,997,176 (GRCm39)	missense	probably benign	0.23
R4689:Vmn2r1	UTSW	3	64,012,074 (GRCm39)	missense	possibly damaging	0.94
R4747:Vmn2r1	UTSW	3	63,989,267 (GRCm39)	missense	probably benign	0.00
R4970:Vmn2r1	UTSW	3	63,997,544 (GRCm39)	missense	possibly damaging	0.81
R5033:Vmn2r1	UTSW	3	64,012,501 (GRCm39)	missense	probably damaging	1.00
R5086:Vmn2r1	UTSW	3	63,997,418 (GRCm39)	missense	probably benign	0.00
R5112:Vmn2r1	UTSW	3	63,997,544 (GRCm39)	missense	possibly damaging	0.81
R5385:Vmn2r1	UTSW	3	64,008,819 (GRCm39)	missense	possibly damaging	0.89
R5629:Vmn2r1	UTSW	3	64,012,538 (GRCm39)	missense	possibly damaging	0.87
R5762:Vmn2r1	UTSW	3	63,997,474 (GRCm39)	missense	probably benign	0.24
R5867:Vmn2r1	UTSW	3	64,011,990 (GRCm39)	missense	probably benign
R5893:Vmn2r1	UTSW	3	63,993,974 (GRCm39)	missense	probably damaging	1.00
R6037:Vmn2r1	UTSW	3	63,989,150 (GRCm39)	missense	probably benign	0.00
R6037:Vmn2r1	UTSW	3	63,989,150 (GRCm39)	missense	probably benign	0.00
R6290:Vmn2r1	UTSW	3	64,012,873 (GRCm39)	missense	probably benign	0.02
R6443:Vmn2r1	UTSW	3	64,012,374 (GRCm39)	missense	possibly damaging	0.78
R6464:Vmn2r1	UTSW	3	64,008,766 (GRCm39)	missense	probably benign
R6826:Vmn2r1	UTSW	3	64,012,567 (GRCm39)	nonsense	probably null
R6874:Vmn2r1	UTSW	3	64,012,376 (GRCm39)	missense	probably damaging	1.00
R6882:Vmn2r1	UTSW	3	63,997,529 (GRCm39)	missense	possibly damaging	0.64
R6983:Vmn2r1	UTSW	3	63,989,118 (GRCm39)	missense	probably benign
R7010:Vmn2r1	UTSW	3	64,012,146 (GRCm39)	missense	probably benign	0.19
R7144:Vmn2r1	UTSW	3	63,997,362 (GRCm39)	missense	probably damaging	1.00
R7341:Vmn2r1	UTSW	3	64,012,877 (GRCm39)	makesense	probably null
R7510:Vmn2r1	UTSW	3	63,993,922 (GRCm39)	missense	probably damaging	1.00
R7557:Vmn2r1	UTSW	3	63,997,475 (GRCm39)	missense	probably damaging	0.99
R7895:Vmn2r1	UTSW	3	63,997,130 (GRCm39)	missense	possibly damaging	0.90
R8108:Vmn2r1	UTSW	3	64,010,471 (GRCm39)	missense	probably damaging	0.98
R8209:Vmn2r1	UTSW	3	63,997,199 (GRCm39)	missense	possibly damaging	0.64
R8365:Vmn2r1	UTSW	3	63,994,034 (GRCm39)	missense	possibly damaging	0.80
R8514:Vmn2r1	UTSW	3	63,993,942 (GRCm39)	missense	probably benign	0.11
R8554:Vmn2r1	UTSW	3	63,997,334 (GRCm39)	missense	probably damaging	0.98
R8980:Vmn2r1	UTSW	3	64,010,501 (GRCm39)	missense
R9140:Vmn2r1	UTSW	3	63,997,465 (GRCm39)	missense	probably benign	0.05
R9239:Vmn2r1	UTSW	3	64,011,959 (GRCm39)	missense	probably damaging	0.99
R9441:Vmn2r1	UTSW	3	64,012,674 (GRCm39)	missense	probably damaging	1.00
R9549:Vmn2r1	UTSW	3	63,997,493 (GRCm39)	missense	probably benign	0.17
R9771:Vmn2r1	UTSW	3	63,997,559 (GRCm39)	missense	possibly damaging	0.79
X0065:Vmn2r1	UTSW	3	63,997,678 (GRCm39)	nonsense	probably null

Posted On

2014-01-21