Incidental Mutation 'IGL01656:Slc25a21'
ID103020
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Slc25a21
Ensembl Gene ENSMUSG00000035472
Gene Namesolute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21
Synonyms9930033G19Rik
Accession Numbers
Is this an essential gene? Possibly non essential (E-score: 0.319) question?
Stock #IGL01656
Quality Score
Status
Chromosome12
Chromosomal Location56712634-57197472 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to C at 56738495 bp
ZygosityHeterozygous
Amino Acid Change Valine to Glycine at position 199 (V199G)
Ref Sequence ENSEMBL: ENSMUSP00000151751 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000044634] [ENSMUST00000110680] [ENSMUST00000217690]
Predicted Effect probably damaging
Transcript: ENSMUST00000044634
AA Change: V192G

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
SMART Domains Protein: ENSMUSP00000039289
Gene: ENSMUSG00000035472
AA Change: V192G

DomainStartEndE-ValueType
Pfam:Mito_carr 10 104 2.3e-24 PFAM
Pfam:Mito_carr 107 200 1.3e-16 PFAM
Pfam:Mito_carr 202 298 3.4e-20 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000110680
AA Change: V199G

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
SMART Domains Protein: ENSMUSP00000106308
Gene: ENSMUSG00000035472
AA Change: V199G

DomainStartEndE-ValueType
Pfam:Mito_carr 28 111 4.7e-21 PFAM
Pfam:Mito_carr 114 207 7.7e-17 PFAM
Pfam:Mito_carr 209 305 2e-20 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000160709
Predicted Effect probably damaging
Transcript: ENSMUST00000217690
AA Change: V199G

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] SLC25A21 is a homolog of the S. cerevisiae ODC proteins, mitochondrial carriers that transport C5-C7 oxodicarboxylates across inner mitochondrial membranes. One of the species transported by ODC is 2-oxoadipate, a common intermediate in the catabolism of lysine, tryptophan, and hydroxylysine in mammals. Within mitochondria, 2-oxoadipate is converted into acetyl-CoA.[supplied by OMIM, Apr 2004]
Allele List at MGI
Other mutations in this stock
Total: 46 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700123L14Rik A G 6: 96,165,694 V123A possibly damaging Het
4732456N10Rik T A 15: 101,555,443 Q392L probably damaging Het
Acrbp A C 6: 125,053,712 E232A possibly damaging Het
Anapc11 T A 11: 120,599,347 F30I possibly damaging Het
Ap5z1 A G 5: 142,470,314 D318G probably benign Het
Cfap43 T C 19: 47,751,900 E1278G possibly damaging Het
Cylc1 A G X: 111,123,716 T589A probably benign Het
Dcaf15 T C 8: 84,097,988 I527V probably benign Het
Ddhd2 C T 8: 25,727,712 V713I probably benign Het
Edc4 T C 8: 105,886,377 V283A possibly damaging Het
Elf5 A G 2: 103,442,861 probably benign Het
Flnb C T 14: 7,902,010 probably benign Het
Flnc C T 6: 29,443,508 probably benign Het
Fstl4 T C 11: 53,000,374 L113P probably damaging Het
Gemin4 C T 11: 76,213,810 V42M probably damaging Het
Gm10076 A G 14: 105,681,920 noncoding transcript Het
Grina A G 15: 76,248,301 Y116C probably damaging Het
Hectd4 T A 5: 121,322,700 L914H probably damaging Het
Il17re T C 6: 113,462,973 probably benign Het
Ivl G A 3: 92,571,655 Q368* probably null Het
Kbtbd8 A G 6: 95,118,676 H73R probably benign Het
Magea3 A T X: 154,949,141 M122K probably damaging Het
Mapk8ip3 T C 17: 24,918,029 D237G probably damaging Het
Nln T C 13: 104,061,741 probably null Het
Nlrp4d T C 7: 10,364,147 Y853C noncoding transcript Het
Nol11 T C 11: 107,189,172 D29G probably benign Het
Nr3c2 C T 8: 77,187,537 L791F probably damaging Het
Olfm3 T C 3: 115,122,633 Y385H probably damaging Het
Olfr126 C T 17: 37,851,138 P182L possibly damaging Het
Olfr1475 G A 19: 13,480,090 A36V probably benign Het
Olfr570 A G 7: 102,901,265 I299M possibly damaging Het
Pklr G T 3: 89,144,995 G505C probably damaging Het
Plxna2 A G 1: 194,790,161 E1071G possibly damaging Het
Prkcq G T 2: 11,226,955 A30S probably damaging Het
Rilpl1 A G 5: 124,503,649 F104L probably damaging Het
Rsph6a C T 7: 19,054,845 T34I probably benign Het
Sec23ip C T 7: 128,750,245 P12L probably damaging Het
Smc1b T C 15: 85,114,776 E483G probably damaging Het
Sucnr1 T C 3: 60,086,411 M120T possibly damaging Het
Tas2r116 T C 6: 132,855,433 probably benign Het
Tbrg4 T A 11: 6,618,522 Q419L possibly damaging Het
Tc2n A G 12: 101,649,089 probably benign Het
Tgfbr2 A C 9: 116,109,669 S388R probably damaging Het
Vmn2r1 A G 3: 64,081,853 E71G probably damaging Het
Xpc A T 6: 91,505,467 I176K probably damaging Het
Xylt1 G T 7: 117,548,993 R264L probably damaging Het
Other mutations in Slc25a21
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00471:Slc25a21 APN 12 56718137 splice site probably null
IGL00776:Slc25a21 APN 12 56770205 missense probably benign 0.43
IGL00788:Slc25a21 APN 12 56713812 utr 3 prime probably benign
IGL01396:Slc25a21 APN 12 57159189 missense probably benign
IGL03095:Slc25a21 APN 12 56738625 missense probably benign 0.09
R0285:Slc25a21 UTSW 12 56858025 critical splice donor site probably null
R1238:Slc25a21 UTSW 12 56738487 missense probably benign 0.00
R1509:Slc25a21 UTSW 12 56858079 missense probably benign 0.00
R1803:Slc25a21 UTSW 12 56858087 missense probably benign 0.01
R3862:Slc25a21 UTSW 12 56718135 splice site probably benign
R4684:Slc25a21 UTSW 12 57196936 missense probably benign 0.00
R4816:Slc25a21 UTSW 12 56713838 missense probably damaging 1.00
R5718:Slc25a21 UTSW 12 56718156 missense probably benign 0.00
R6265:Slc25a21 UTSW 12 57196900 missense probably benign 0.33
R6953:Slc25a21 UTSW 12 57159169 missense probably benign
R7337:Slc25a21 UTSW 12 56858043 missense probably benign 0.03
U24488:Slc25a21 UTSW 12 56738497 missense possibly damaging 0.66
Posted On2014-01-21