Incidental Mutation 'IGL01660:Or5m13'
ID |
103119 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Or5m13
|
Ensembl Gene |
ENSMUSG00000058884 |
Gene Name |
olfactory receptor family 5 subfamily M member 13 |
Synonyms |
MOR196-5P, GA_x6K02T2Q125-47397266-47398205, Olfr1025, MOR196-6_p |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.099)
|
Stock # |
IGL01660
|
Quality Score |
|
Status
|
|
Chromosome |
2 |
Chromosomal Location |
85748271-85749097 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 85748908 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Isoleucine to Threonine
at position 213
(I213T)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000149785
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000056718]
[ENSMUST00000188749]
[ENSMUST00000213474]
[ENSMUST00000217615]
[ENSMUST00000219615]
|
AlphaFold |
A0A140T8K3 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000056718
|
SMART Domains |
Protein: ENSMUSP00000049887 Gene: ENSMUSG00000042863
Domain | Start | End | E-Value | Type |
Pfam:7tm_4
|
31 |
307 |
6.1e-58 |
PFAM |
Pfam:7tm_1
|
41 |
290 |
9e-25 |
PFAM |
|
Predicted Effect |
|
SMART Domains |
Protein: ENSMUSP00000076311 Gene: ENSMUSG00000058884 AA Change: I213T
Domain | Start | End | E-Value | Type |
Pfam:7tm_4
|
31 |
308 |
1.5e-57 |
PFAM |
Pfam:7tm_1
|
41 |
290 |
2.6e-24 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000188749
AA Change: I213T
PolyPhen 2
Score 0.250 (Sensitivity: 0.91; Specificity: 0.88)
|
SMART Domains |
Protein: ENSMUSP00000139860 Gene: ENSMUSG00000058884 AA Change: I213T
Domain | Start | End | E-Value | Type |
low complexity region
|
26 |
40 |
N/A |
INTRINSIC |
Pfam:7tm_1
|
41 |
290 |
5.7e-30 |
PFAM |
Pfam:7tm_4
|
139 |
283 |
7.8e-48 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000213474
AA Change: I213T
PolyPhen 2
Score 0.250 (Sensitivity: 0.91; Specificity: 0.88)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000217615
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000219615
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 38 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Acta2 |
A |
G |
19: 34,229,191 (GRCm39) |
I66T |
probably damaging |
Het |
Actl11 |
T |
C |
9: 107,806,247 (GRCm39) |
V190A |
probably benign |
Het |
Ankub1 |
T |
A |
3: 57,597,817 (GRCm39) |
Y51F |
possibly damaging |
Het |
Armh3 |
A |
T |
19: 45,928,915 (GRCm39) |
L393H |
probably damaging |
Het |
Ccdc63 |
G |
A |
5: 122,249,027 (GRCm39) |
S434L |
possibly damaging |
Het |
Cdan1 |
T |
A |
2: 120,556,134 (GRCm39) |
I711F |
possibly damaging |
Het |
Cep170b |
C |
A |
12: 112,710,594 (GRCm39) |
N1474K |
probably damaging |
Het |
Cyp2c40 |
A |
G |
19: 39,775,254 (GRCm39) |
S333P |
probably damaging |
Het |
Dars1 |
A |
G |
1: 128,343,081 (GRCm39) |
|
probably benign |
Het |
Dock3 |
T |
A |
9: 106,909,563 (GRCm39) |
|
probably benign |
Het |
Dsp |
A |
G |
13: 38,360,471 (GRCm39) |
I359V |
possibly damaging |
Het |
Fut8 |
T |
G |
12: 77,497,032 (GRCm39) |
L414* |
probably null |
Het |
Gja1 |
A |
G |
10: 56,264,544 (GRCm39) |
Y301C |
probably damaging |
Het |
Glipr1l1 |
T |
C |
10: 111,908,184 (GRCm39) |
S161P |
probably damaging |
Het |
Gpat4 |
A |
T |
8: 23,665,354 (GRCm39) |
|
probably null |
Het |
Grhl1 |
T |
A |
12: 24,658,577 (GRCm39) |
|
probably null |
Het |
Hectd3 |
T |
C |
4: 116,853,569 (GRCm39) |
V181A |
possibly damaging |
Het |
Htr2a |
T |
A |
14: 74,943,194 (GRCm39) |
I258N |
probably damaging |
Het |
Hyou1 |
T |
A |
9: 44,292,414 (GRCm39) |
D83E |
possibly damaging |
Het |
Myh10 |
T |
A |
11: 68,676,715 (GRCm39) |
L862Q |
probably benign |
Het |
Nkx2-2 |
T |
C |
2: 147,027,833 (GRCm39) |
S36G |
probably benign |
Het |
Nsun2 |
T |
A |
13: 69,771,368 (GRCm39) |
V326E |
probably benign |
Het |
Nuak2 |
T |
C |
1: 132,259,308 (GRCm39) |
V362A |
probably benign |
Het |
Nyap2 |
G |
A |
1: 81,169,642 (GRCm39) |
C133Y |
probably damaging |
Het |
Oas2 |
T |
C |
5: 120,879,288 (GRCm39) |
T351A |
probably benign |
Het |
Or11m3 |
C |
T |
15: 98,396,076 (GRCm39) |
T241I |
probably damaging |
Het |
Pde4d |
A |
T |
13: 110,074,606 (GRCm39) |
I404F |
probably damaging |
Het |
Pga5 |
A |
G |
19: 10,652,456 (GRCm39) |
S95P |
probably damaging |
Het |
Pitpnm2 |
A |
T |
5: 124,261,257 (GRCm39) |
D947E |
probably damaging |
Het |
Pla2g10 |
C |
T |
16: 13,545,950 (GRCm39) |
R28H |
probably damaging |
Het |
Prlr |
A |
G |
15: 10,317,676 (GRCm39) |
D84G |
probably damaging |
Het |
Rbm15b |
C |
T |
9: 106,762,908 (GRCm39) |
G420D |
probably damaging |
Het |
Tbcd |
A |
G |
11: 121,496,153 (GRCm39) |
T1063A |
probably benign |
Het |
Tmc2 |
C |
T |
2: 130,102,144 (GRCm39) |
Q770* |
probably null |
Het |
Tpo |
T |
C |
12: 30,169,399 (GRCm39) |
|
probably benign |
Het |
Vim |
A |
G |
2: 13,579,624 (GRCm39) |
N128D |
probably damaging |
Het |
Vmn1r21 |
A |
T |
6: 57,821,222 (GRCm39) |
I74N |
probably damaging |
Het |
Vmn2r52 |
A |
C |
7: 9,893,107 (GRCm39) |
I677M |
probably damaging |
Het |
|
Other mutations in Or5m13 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL02881:Or5m13
|
APN |
2 |
85,748,460 (GRCm39) |
missense |
probably benign |
0.00 |
R0097:Or5m13
|
UTSW |
2 |
85,749,184 (GRCm39) |
missense |
probably benign |
0.00 |
R0097:Or5m13
|
UTSW |
2 |
85,749,184 (GRCm39) |
missense |
probably benign |
0.00 |
R0324:Or5m13
|
UTSW |
2 |
85,748,295 (GRCm39) |
missense |
probably benign |
0.22 |
R0392:Or5m13
|
UTSW |
2 |
85,749,106 (GRCm39) |
missense |
possibly damaging |
0.81 |
R0765:Or5m13
|
UTSW |
2 |
85,749,049 (GRCm39) |
missense |
probably damaging |
0.99 |
R1199:Or5m13
|
UTSW |
2 |
85,748,379 (GRCm39) |
missense |
probably benign |
0.00 |
R1894:Or5m13
|
UTSW |
2 |
85,748,599 (GRCm39) |
missense |
probably benign |
0.28 |
R2027:Or5m13
|
UTSW |
2 |
85,749,114 (GRCm39) |
missense |
probably damaging |
0.99 |
R2141:Or5m13
|
UTSW |
2 |
85,749,171 (GRCm39) |
missense |
probably null |
|
R3871:Or5m13
|
UTSW |
2 |
85,748,926 (GRCm39) |
splice site |
probably null |
|
R4837:Or5m13
|
UTSW |
2 |
85,748,748 (GRCm39) |
missense |
probably benign |
0.00 |
R4945:Or5m13
|
UTSW |
2 |
85,748,917 (GRCm39) |
missense |
possibly damaging |
0.81 |
R5056:Or5m13
|
UTSW |
2 |
85,748,480 (GRCm39) |
missense |
probably damaging |
1.00 |
R5441:Or5m13
|
UTSW |
2 |
85,748,934 (GRCm39) |
missense |
probably benign |
0.01 |
R5960:Or5m13
|
UTSW |
2 |
85,749,069 (GRCm39) |
missense |
probably benign |
0.07 |
R6807:Or5m13
|
UTSW |
2 |
85,748,382 (GRCm39) |
missense |
possibly damaging |
0.48 |
R7320:Or5m13
|
UTSW |
2 |
85,748,718 (GRCm39) |
missense |
probably benign |
0.00 |
R8523:Or5m13
|
UTSW |
2 |
85,748,407 (GRCm39) |
missense |
probably damaging |
0.97 |
R8715:Or5m13
|
UTSW |
2 |
85,748,273 (GRCm39) |
start codon destroyed |
probably null |
0.81 |
R8734:Or5m13
|
UTSW |
2 |
85,748,993 (GRCm39) |
nonsense |
probably null |
|
R9275:Or5m13
|
UTSW |
2 |
85,749,046 (GRCm39) |
missense |
probably benign |
0.17 |
R9427:Or5m13
|
UTSW |
2 |
85,748,704 (GRCm39) |
missense |
probably benign |
0.00 |
R9728:Or5m13
|
UTSW |
2 |
85,748,887 (GRCm39) |
missense |
possibly damaging |
0.72 |
V1662:Or5m13
|
UTSW |
2 |
85,748,938 (GRCm39) |
missense |
probably benign |
0.10 |
Z1176:Or5m13
|
UTSW |
2 |
85,748,845 (GRCm39) |
missense |
probably damaging |
0.99 |
|
Posted On |
2014-01-21 |