Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01669:Rmnd5b'

103403

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Rmnd5b

Ensembl Gene

ENSMUSG00000001054

Gene Name

required for meiotic nuclear division 5 homolog B

Synonyms

0610039K22Rik, Gid2

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

IGL01669

Quality Score

Status

Chromosome

Chromosomal Location

51514500-51526723 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to T at 51518727 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Methionine at position 89 (V89M)

Ref Sequence

ENSEMBL: ENSMUSP00000120636 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000001081] [ENSMUST00000127405] [ENSMUST00000136020]

AlphaFold

Q91YQ7

Predicted Effect

probably damaging
Transcript: ENSMUST00000001081
AA Change: V89M

PolyPhen 2 Score 0.989 (Sensitivity: 0.72; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000001081
Gene: ENSMUSG00000001054
AA Change: V89M

Domain	Start	End	E-Value	Type
LisH	116	148	3.6e-4	SMART
CTLH	155	212	7.82e-14	SMART
CRA	210	304	1.63e-21	SMART
Pfam:zf-RING_UBOX	338	377	3.7e-18	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000001083

Predicted Effect

probably benign
Transcript: ENSMUST00000127405

SMART Domains

Protein: ENSMUSP00000120014
Gene: ENSMUSG00000001056

Domain	Start	End	E-Value	Type
Pfam:Ribosomal_L7Ae	45	139	1.1e-26	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000132854

Predicted Effect

probably damaging
Transcript: ENSMUST00000136020
AA Change: V89M

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000120636
Gene: ENSMUSG00000001054
AA Change: V89M

Domain	Start	End	E-Value	Type
LisH	116	148	3.6e-4	SMART
CTLH	155	212	7.82e-14	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000147009

SMART Domains

Protein: ENSMUSP00000118594
Gene: ENSMUSG00000001054

Domain	Start	End	E-Value	Type
Pfam:CLTH	1	91	1.4e-11	PFAM
Pfam:zf-RING_UBOX	130	169	3.1e-19	PFAM

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 40 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acsl4	G	T	X: 141,126,184 (GRCm39)	D313E	probably damaging	Het
Aifm3	A	C	16: 17,321,405 (GRCm39)	K453T	probably benign	Het
Anks1b	T	C	10: 90,733,100 (GRCm39)		probably benign	Het
Arfgef1	T	C	1: 10,229,840 (GRCm39)	D1287G	probably damaging	Het
Bcl3	G	A	7: 19,546,416 (GRCm39)	Q140*	probably null	Het
Bnipl	T	G	3: 95,150,045 (GRCm39)	R316S	probably damaging	Het
Cacna1i	T	A	15: 80,275,958 (GRCm39)	H1916Q	probably benign	Het
Ccdc171	C	T	4: 83,599,432 (GRCm39)	A749V	probably damaging	Het
Ceacam18	G	A	7: 43,294,939 (GRCm39)	G333E	probably damaging	Het
Cul7	G	T	17: 46,969,641 (GRCm39)	M969I	possibly damaging	Het
Cylc2	A	G	4: 51,228,360 (GRCm39)	T144A	probably benign	Het
Cyp2c50	A	T	19: 40,086,495 (GRCm39)	H294L	probably damaging	Het
D430041D05Rik	T	C	2: 104,085,306 (GRCm39)	K1081R	probably damaging	Het
D930020B18Rik	A	G	10: 121,519,866 (GRCm39)	K456R	probably benign	Het
Drd2	A	G	9: 49,313,389 (GRCm39)	N186S	possibly damaging	Het
Fanci	A	T	7: 79,098,925 (GRCm39)	E1306D	probably benign	Het
Fbxl21	T	A	13: 56,675,522 (GRCm39)		probably benign	Het
Galk2	T	A	2: 125,729,807 (GRCm39)	Y63N	probably damaging	Het
Git2	T	C	5: 114,905,166 (GRCm39)	D97G	probably damaging	Het
Gm8258	T	A	5: 104,923,940 (GRCm39)		noncoding transcript	Het
Irf4	G	T	13: 30,941,454 (GRCm39)	S270I	probably damaging	Het
Itgb3	C	A	11: 104,524,216 (GRCm39)		probably benign	Het
Itpr2	A	C	6: 146,081,727 (GRCm39)	I2299R	probably damaging	Het
Lig4	T	C	8: 10,023,673 (GRCm39)	I36V	probably benign	Het
Nedd9	A	G	13: 41,492,111 (GRCm39)	V133A	probably damaging	Het
Nup133	A	C	8: 124,665,869 (GRCm39)	Y185*	probably null	Het
Or51b6b	A	T	7: 103,310,194 (GRCm39)	F88I	probably benign	Het
Or5d14	T	C	2: 87,880,128 (GRCm39)	Y280C	possibly damaging	Het
Or6c3	A	G	10: 129,309,080 (GRCm39)	H173R	probably damaging	Het
Pgbd5	T	A	8: 125,101,138 (GRCm39)	T373S	possibly damaging	Het
Ppp1r8	T	C	4: 132,555,480 (GRCm39)	E246G	probably benign	Het
Rnf123	T	C	9: 107,935,555 (GRCm39)	I969V	probably damaging	Het
Ror2	A	G	13: 53,265,124 (GRCm39)	I656T	probably damaging	Het
Sgsm1	T	C	5: 113,411,356 (GRCm39)	E503G	probably benign	Het
Smgc	T	A	15: 91,744,882 (GRCm39)	S381T	possibly damaging	Het
Tlr4	T	G	4: 66,759,504 (GRCm39)	F766V	possibly damaging	Het
Tnc	T	C	4: 63,918,938 (GRCm39)	T1162A	probably damaging	Het
Usp39	A	G	6: 72,315,476 (GRCm39)	V156A	probably damaging	Het
Zdhhc5	A	G	2: 84,521,538 (GRCm39)	Y352H	probably damaging	Het
Zfp646	A	G	7: 127,478,137 (GRCm39)	T105A	probably benign	Het

Other mutations in Rmnd5b

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02827:Rmnd5b	APN	11	51,518,849 (GRCm39)	missense	possibly damaging	0.95
R0092:Rmnd5b	UTSW	11	51,520,419 (GRCm39)	missense	possibly damaging	0.90
R1886:Rmnd5b	UTSW	11	51,518,465 (GRCm39)	missense	probably damaging	1.00
R4556:Rmnd5b	UTSW	11	51,517,732 (GRCm39)	splice site	probably null
R4996:Rmnd5b	UTSW	11	51,518,735 (GRCm39)	missense	probably damaging	0.99
R5283:Rmnd5b	UTSW	11	51,517,887 (GRCm39)	missense	probably damaging	1.00
R5590:Rmnd5b	UTSW	11	51,518,789 (GRCm39)	missense	probably damaging	1.00
R6119:Rmnd5b	UTSW	11	51,516,536 (GRCm39)	missense	probably benign	0.21
R6993:Rmnd5b	UTSW	11	51,515,427 (GRCm39)	intron	probably benign
R7128:Rmnd5b	UTSW	11	51,515,364 (GRCm39)	missense	possibly damaging	0.91
R8779:Rmnd5b	UTSW	11	51,518,459 (GRCm39)	missense	possibly damaging	0.64
R8971:Rmnd5b	UTSW	11	51,515,322 (GRCm39)	missense	probably benign	0.02
R9080:Rmnd5b	UTSW	11	51,515,055 (GRCm39)	critical splice donor site	probably null
R9610:Rmnd5b	UTSW	11	51,517,869 (GRCm39)	missense	probably damaging	0.97
R9611:Rmnd5b	UTSW	11	51,517,869 (GRCm39)	missense	probably damaging	0.97
R9690:Rmnd5b	UTSW	11	51,518,511 (GRCm39)	missense	probably benign	0.00

Posted On

2014-01-21