Incidental Mutation 'IGL01697:Vmn1r178'
ID |
104294 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Vmn1r178
|
Ensembl Gene |
ENSMUSG00000062598 |
Gene Name |
vomeronasal 1 receptor 178 |
Synonyms |
V1rd13, LOC232959 |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.051)
|
Stock # |
IGL01697
|
Quality Score |
|
Status
|
|
Chromosome |
7 |
Chromosomal Location |
23592954-23593868 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to A
at 23593114 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Isoleucine to Asparagine
at position 54
(I54N)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000154244
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000078593]
[ENSMUST00000226450]
[ENSMUST00000226489]
[ENSMUST00000226640]
[ENSMUST00000227993]
|
AlphaFold |
Q8R2B6 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000078593
AA Change: I54N
PolyPhen 2
Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)
|
SMART Domains |
Protein: ENSMUSP00000077666 Gene: ENSMUSG00000062598 AA Change: I54N
Domain | Start | End | E-Value | Type |
Pfam:TAS2R
|
8 |
297 |
7.9e-11 |
PFAM |
Pfam:7tm_1
|
15 |
283 |
2.5e-7 |
PFAM |
Pfam:V1R
|
41 |
296 |
7.8e-19 |
PFAM |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000226450
AA Change: I54N
PolyPhen 2
Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000226489
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000226640
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000227993
AA Change: I54N
PolyPhen 2
Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 30 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
9430015G10Rik |
T |
A |
4: 156,203,613 (GRCm39) |
|
probably benign |
Het |
Arid2 |
A |
C |
15: 96,259,453 (GRCm39) |
|
probably null |
Het |
Cadm1 |
C |
A |
9: 47,761,622 (GRCm39) |
D435E |
probably damaging |
Het |
Dagla |
A |
G |
19: 10,248,562 (GRCm39) |
F33L |
probably benign |
Het |
Edrf1 |
A |
G |
7: 133,245,459 (GRCm39) |
H199R |
probably benign |
Het |
F5 |
T |
A |
1: 164,021,621 (GRCm39) |
N1365K |
probably benign |
Het |
Gipc2 |
T |
G |
3: 151,843,245 (GRCm39) |
I131L |
probably benign |
Het |
Gpc1 |
C |
T |
1: 92,786,132 (GRCm39) |
S507F |
possibly damaging |
Het |
Grid1 |
A |
G |
14: 35,031,214 (GRCm39) |
D269G |
probably benign |
Het |
Ighv12-3 |
A |
T |
12: 114,330,573 (GRCm39) |
M1K |
probably null |
Het |
Kif5b |
T |
C |
18: 6,226,871 (GRCm39) |
H129R |
possibly damaging |
Het |
Lipo3 |
A |
T |
19: 33,536,965 (GRCm39) |
C252S |
probably damaging |
Het |
Mast4 |
A |
C |
13: 102,904,401 (GRCm39) |
N645K |
probably damaging |
Het |
Megf9 |
T |
A |
4: 70,351,709 (GRCm39) |
T471S |
possibly damaging |
Het |
Mmrn1 |
A |
G |
6: 60,953,477 (GRCm39) |
D586G |
possibly damaging |
Het |
Ninl |
A |
T |
2: 150,781,867 (GRCm39) |
L1206Q |
probably damaging |
Het |
Oog2 |
T |
A |
4: 143,921,754 (GRCm39) |
N221K |
possibly damaging |
Het |
Or13a17 |
T |
C |
7: 140,271,565 (GRCm39) |
V249A |
possibly damaging |
Het |
Or5b96 |
T |
A |
19: 12,867,831 (GRCm39) |
T37S |
probably benign |
Het |
Or6c8b |
C |
A |
10: 128,882,371 (GRCm39) |
C187F |
probably damaging |
Het |
Pik3ap1 |
G |
A |
19: 41,313,018 (GRCm39) |
A365V |
probably damaging |
Het |
Ppwd1 |
T |
C |
13: 104,356,972 (GRCm39) |
E181G |
probably benign |
Het |
Scaf11 |
A |
C |
15: 96,321,504 (GRCm39) |
|
probably benign |
Het |
Skic3 |
C |
T |
13: 76,276,852 (GRCm39) |
L479F |
probably benign |
Het |
Skint7 |
T |
A |
4: 111,837,654 (GRCm39) |
|
probably benign |
Het |
Sox14 |
T |
C |
9: 99,757,716 (GRCm39) |
I8V |
probably benign |
Het |
Spata31f3 |
T |
A |
4: 42,874,163 (GRCm39) |
M2L |
probably benign |
Het |
Stim1 |
A |
T |
7: 102,075,176 (GRCm39) |
|
probably benign |
Het |
Ttll3 |
T |
C |
6: 113,376,690 (GRCm39) |
S357P |
probably benign |
Het |
Zdhhc2 |
T |
C |
8: 40,920,460 (GRCm39) |
|
probably benign |
Het |
|
Other mutations in Vmn1r178 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01781:Vmn1r178
|
APN |
7 |
23,593,434 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01934:Vmn1r178
|
APN |
7 |
23,593,362 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02571:Vmn1r178
|
APN |
7 |
23,593,660 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02727:Vmn1r178
|
APN |
7 |
23,593,871 (GRCm39) |
splice site |
probably null |
|
IGL03112:Vmn1r178
|
APN |
7 |
23,593,086 (GRCm39) |
missense |
probably damaging |
1.00 |
R0112:Vmn1r178
|
UTSW |
7 |
23,593,609 (GRCm39) |
missense |
possibly damaging |
0.93 |
R0830:Vmn1r178
|
UTSW |
7 |
23,593,452 (GRCm39) |
missense |
possibly damaging |
0.91 |
R1186:Vmn1r178
|
UTSW |
7 |
23,593,317 (GRCm39) |
nonsense |
probably null |
|
R1340:Vmn1r178
|
UTSW |
7 |
23,593,281 (GRCm39) |
missense |
probably benign |
0.34 |
R1640:Vmn1r178
|
UTSW |
7 |
23,593,548 (GRCm39) |
missense |
possibly damaging |
0.70 |
R1696:Vmn1r178
|
UTSW |
7 |
23,593,625 (GRCm39) |
missense |
probably damaging |
0.99 |
R1746:Vmn1r178
|
UTSW |
7 |
23,593,329 (GRCm39) |
missense |
probably benign |
0.00 |
R3084:Vmn1r178
|
UTSW |
7 |
23,593,331 (GRCm39) |
missense |
possibly damaging |
0.94 |
R4368:Vmn1r178
|
UTSW |
7 |
23,593,447 (GRCm39) |
missense |
probably damaging |
1.00 |
R5199:Vmn1r178
|
UTSW |
7 |
23,593,814 (GRCm39) |
missense |
probably benign |
0.11 |
R6380:Vmn1r178
|
UTSW |
7 |
23,592,984 (GRCm39) |
missense |
possibly damaging |
0.62 |
R7000:Vmn1r178
|
UTSW |
7 |
23,593,762 (GRCm39) |
missense |
probably benign |
0.21 |
R7142:Vmn1r178
|
UTSW |
7 |
23,593,035 (GRCm39) |
missense |
probably damaging |
1.00 |
R7268:Vmn1r178
|
UTSW |
7 |
23,593,378 (GRCm39) |
missense |
probably benign |
0.05 |
R8829:Vmn1r178
|
UTSW |
7 |
23,593,264 (GRCm39) |
missense |
probably damaging |
1.00 |
R8832:Vmn1r178
|
UTSW |
7 |
23,593,264 (GRCm39) |
missense |
probably damaging |
1.00 |
R9068:Vmn1r178
|
UTSW |
7 |
23,593,404 (GRCm39) |
missense |
probably damaging |
1.00 |
R9798:Vmn1r178
|
UTSW |
7 |
23,593,733 (GRCm39) |
nonsense |
probably null |
|
|
Posted On |
2014-01-21 |