Incidental Mutation 'IGL01710:Tcerg1l'
ID 104744
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Tcerg1l
Ensembl Gene ENSMUSG00000091002
Gene Name transcription elongation regulator 1-like
Synonyms 5730476P14Rik
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # IGL01710
Quality Score
Status
Chromosome 7
Chromosomal Location 137810703-137999459 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 137996789 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Lysine to Asparagine at position 149 (K149N)
Ref Sequence ENSEMBL: ENSMUSP00000124476 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000160436]
AlphaFold Q3B807
Predicted Effect possibly damaging
Transcript: ENSMUST00000160436
AA Change: K149N

PolyPhen 2 Score 0.807 (Sensitivity: 0.84; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000124476
Gene: ENSMUSG00000091002
AA Change: K149N

DomainStartEndE-ValueType
low complexity region 6 44 N/A INTRINSIC
low complexity region 52 97 N/A INTRINSIC
WW 146 178 2.11e1 SMART
low complexity region 235 249 N/A INTRINSIC
WW 344 376 3.29e-4 SMART
low complexity region 402 415 N/A INTRINSIC
FF 454 507 4.57e-12 SMART
FF 520 574 1.53e-4 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000162222
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 41 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Ablim3 G A 18: 62,004,645 (GRCm39) T48I probably damaging Het
Ccpg1 T C 9: 72,904,723 (GRCm39) probably benign Het
Chkb G A 15: 89,310,843 (GRCm39) Q379* probably null Het
Chst15 T A 7: 131,872,236 (GRCm39) D15V probably benign Het
Cntn4 G A 6: 106,527,392 (GRCm39) V425I possibly damaging Het
Cpa6 T A 1: 10,395,497 (GRCm39) N390I probably damaging Het
Efhd2 A G 4: 141,587,872 (GRCm39) F193S probably damaging Het
Ell3 T C 2: 121,271,993 (GRCm39) H128R probably damaging Het
Ercc5 T G 1: 44,203,235 (GRCm39) L291V probably damaging Het
Eva1c A G 16: 90,701,235 (GRCm39) Y302C probably damaging Het
Fmo3 A C 1: 162,810,612 (GRCm39) L26R probably damaging Het
Galntl6 T A 8: 58,989,002 (GRCm39) D17V probably damaging Het
Gm6483 C T 8: 19,741,629 (GRCm39) P55S probably damaging Het
Gstt2 A G 10: 75,669,579 (GRCm39) probably benign Het
Hmcn2 T A 2: 31,233,114 (GRCm39) L221Q probably damaging Het
Hoxa3 T C 6: 52,147,554 (GRCm39) probably benign Het
Kctd12b T C X: 152,472,479 (GRCm39) D70G probably damaging Het
Kdm7a T A 6: 39,152,320 (GRCm39) E125D probably benign Het
Klk1b21 T A 7: 43,755,919 (GRCm39) F249L probably benign Het
Mrpl41 T C 2: 24,864,429 (GRCm39) D81G possibly damaging Het
Nomo1 T A 7: 45,687,980 (GRCm39) L82Q probably damaging Het
Or5p58 G T 7: 107,694,449 (GRCm39) F109L probably benign Het
Papolg A T 11: 23,814,026 (GRCm39) S718T probably damaging Het
Pex6 A G 17: 47,036,252 (GRCm39) probably benign Het
Pi4k2a T A 19: 42,093,418 (GRCm39) L253Q probably damaging Het
Prdx6b T A 2: 80,123,490 (GRCm39) F100I probably damaging Het
Prr36 G A 8: 4,265,243 (GRCm39) P169L probably damaging Het
Ptgfrn T C 3: 100,980,404 (GRCm39) E312G probably damaging Het
Rasgrf1 A G 9: 89,873,745 (GRCm39) I685V probably benign Het
Setdb1 T C 3: 95,246,164 (GRCm39) E586G probably damaging Het
Sez6l2 C A 7: 126,567,388 (GRCm39) T841K probably damaging Het
Slc25a17 A T 15: 81,211,527 (GRCm39) L163* probably null Het
Slc35f3 A T 8: 127,115,900 (GRCm39) I276F probably benign Het
Tex28 T A X: 73,195,939 (GRCm39) K278* probably null Het
Tmprss9 A G 10: 80,733,793 (GRCm39) probably benign Het
Tnfaip8l1 A G 17: 56,478,782 (GRCm39) K24R probably benign Het
Trim36 T C 18: 46,321,455 (GRCm39) probably benign Het
Uba1 C T X: 20,537,604 (GRCm39) T274I possibly damaging Het
Ubr2 T C 17: 47,254,335 (GRCm39) T1439A probably benign Het
Ubr4 A G 4: 139,145,772 (GRCm39) D1523G possibly damaging Het
Uchl4 A T 9: 64,142,788 (GRCm39) T90S probably benign Het
Other mutations in Tcerg1l
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00504:Tcerg1l APN 7 137,811,533 (GRCm39) missense probably damaging 0.99
IGL01402:Tcerg1l APN 7 137,861,568 (GRCm39) missense probably damaging 0.98
IGL01510:Tcerg1l APN 7 137,996,034 (GRCm39) splice site probably benign
IGL01638:Tcerg1l APN 7 137,881,805 (GRCm39) missense probably damaging 1.00
IGL02547:Tcerg1l APN 7 137,850,100 (GRCm39) critical splice donor site probably null
IGL02887:Tcerg1l APN 7 137,831,619 (GRCm39) missense probably damaging 1.00
IGL03105:Tcerg1l APN 7 137,850,173 (GRCm39) splice site probably benign
IGL03348:Tcerg1l APN 7 137,815,100 (GRCm39) missense probably damaging 0.97
R0378:Tcerg1l UTSW 7 137,878,384 (GRCm39) missense probably benign 0.01
R1474:Tcerg1l UTSW 7 137,881,804 (GRCm39) missense probably damaging 0.99
R1589:Tcerg1l UTSW 7 137,963,496 (GRCm39) missense probably damaging 0.99
R1658:Tcerg1l UTSW 7 137,995,909 (GRCm39) missense probably damaging 0.98
R1792:Tcerg1l UTSW 7 137,963,595 (GRCm39) missense probably benign 0.07
R1807:Tcerg1l UTSW 7 137,996,826 (GRCm39) missense probably benign 0.34
R2920:Tcerg1l UTSW 7 137,850,108 (GRCm39) missense probably damaging 0.99
R3148:Tcerg1l UTSW 7 137,861,596 (GRCm39) missense probably benign
R4106:Tcerg1l UTSW 7 137,861,673 (GRCm39) missense probably damaging 0.99
R4180:Tcerg1l UTSW 7 137,878,405 (GRCm39) critical splice acceptor site probably null
R4241:Tcerg1l UTSW 7 137,999,361 (GRCm39) missense unknown
R4898:Tcerg1l UTSW 7 137,819,786 (GRCm39) missense probably damaging 0.99
R5652:Tcerg1l UTSW 7 137,881,775 (GRCm39) missense probably damaging 0.97
R6646:Tcerg1l UTSW 7 137,996,912 (GRCm39) splice site probably null
R6824:Tcerg1l UTSW 7 137,995,844 (GRCm39) critical splice donor site probably null
R7414:Tcerg1l UTSW 7 137,819,786 (GRCm39) missense probably damaging 0.97
R7490:Tcerg1l UTSW 7 137,861,557 (GRCm39) missense probably damaging 1.00
R8810:Tcerg1l UTSW 7 137,811,526 (GRCm39) missense possibly damaging 0.79
R8889:Tcerg1l UTSW 7 137,999,260 (GRCm39) nonsense probably null
R8892:Tcerg1l UTSW 7 137,999,260 (GRCm39) nonsense probably null
R9146:Tcerg1l UTSW 7 137,831,588 (GRCm39) missense probably damaging 1.00
R9374:Tcerg1l UTSW 7 137,995,998 (GRCm39) missense possibly damaging 0.95
R9392:Tcerg1l UTSW 7 137,815,164 (GRCm39) missense probably damaging 0.98
R9402:Tcerg1l UTSW 7 137,811,551 (GRCm39) missense probably damaging 0.99
R9428:Tcerg1l UTSW 7 137,811,490 (GRCm39) missense probably damaging 0.99
R9551:Tcerg1l UTSW 7 137,995,998 (GRCm39) missense possibly damaging 0.95
R9552:Tcerg1l UTSW 7 137,995,998 (GRCm39) missense possibly damaging 0.95
R9572:Tcerg1l UTSW 7 137,881,787 (GRCm39) missense probably benign 0.07
R9624:Tcerg1l UTSW 7 137,995,923 (GRCm39) missense possibly damaging 0.71
Posted On 2014-01-21