Incidental Mutation 'IGL01728:Chuk'
ID105364
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Chuk
Ensembl Gene ENSMUSG00000025199
Gene Nameconserved helix-loop-helix ubiquitous kinase
SynonymsChuk1, IKK 1, IKK alpha, IkappaB kinase alpha, IKKalpha, IKK-1, IKK-alpha, IKK[a], IKK1
Accession Numbers
Is this an essential gene? Essential (E-score: 1.000) question?
Stock #IGL01728
Quality Score
Status
Chromosome19
Chromosomal Location44073335-44107480 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to C at 44098646 bp
ZygosityHeterozygous
Amino Acid Change Asparagine to Serine at position 138 (N138S)
Ref Sequence ENSEMBL: ENSMUSP00000026217 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000026217] [ENSMUST00000119591]
Predicted Effect possibly damaging
Transcript: ENSMUST00000026217
AA Change: N138S

PolyPhen 2 Score 0.936 (Sensitivity: 0.80; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000026217
Gene: ENSMUSG00000025199
AA Change: N138S

DomainStartEndE-ValueType
low complexity region 3 14 N/A INTRINSIC
Pfam:Pkinase_Tyr 15 254 3.5e-39 PFAM
Pfam:Pkinase 15 298 8.3e-55 PFAM
Blast:PHB 589 659 1e-38 BLAST
IKKbetaNEMObind 706 743 1.64e-15 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000119591
AA Change: N138S

PolyPhen 2 Score 0.429 (Sensitivity: 0.89; Specificity: 0.90)
SMART Domains Protein: ENSMUSP00000113809
Gene: ENSMUSG00000025199
AA Change: N138S

DomainStartEndE-ValueType
low complexity region 3 14 N/A INTRINSIC
Pfam:Pkinase_Tyr 15 253 9.1e-38 PFAM
Pfam:Pkinase 15 298 8.5e-54 PFAM
Blast:PHB 589 659 8e-39 BLAST
Predicted Effect noncoding transcript
Transcript: ENSMUST00000146861
Predicted Effect noncoding transcript
Transcript: ENSMUST00000147423
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the serine/threonine protein kinase family. The encoded protein, a component of a cytokine-activated protein complex that is an inhibitor of the essential transcription factor NF-kappa-B complex, phosphorylates sites that trigger the degradation of the inhibitor via the ubiquination pathway, thereby activating the transcription factor. [provided by RefSeq, Jul 2008]
PHENOTYPE: Homozygotes for targeted null mutations die neonataly and exhibit thickened, taut, adhesive skin that prevents appendages from protruding from the trunk, absence of whiskers, skeletal abnormalities, and closed esophagus. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 34 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700019A02Rik A G 1: 53,182,509 S54P probably benign Het
Adamtsl1 T C 4: 86,110,837 I71T probably damaging Het
Agbl3 T C 6: 34,782,157 M1T probably null Het
Ankib1 A G 5: 3,701,992 probably benign Het
Brinp3 T G 1: 146,831,551 probably null Het
Dock7 G A 4: 98,962,331 T1588M probably damaging Het
Ehbp1 G A 11: 22,101,115 T479I probably damaging Het
Gpn2 T C 4: 133,584,502 I15T possibly damaging Het
Haao A G 17: 83,835,229 F149S probably damaging Het
Hist1h3b G A 13: 23,752,729 R117H probably benign Het
Iqsec3 T A 6: 121,412,664 probably benign Het
Lrrc39 G T 3: 116,579,500 probably benign Het
Ltbp2 C A 12: 84,791,009 S1199I probably damaging Het
Mageb3 G T 2: 121,954,460 P254T probably damaging Het
Mapkbp1 C T 2: 120,023,821 P1300S probably damaging Het
Mtfmt T A 9: 65,435,818 L2H probably damaging Het
Myo18a G T 11: 77,777,856 G181W probably damaging Het
Mzf1 T C 7: 13,051,727 probably benign Het
Nfatc2 A T 2: 168,536,242 L280Q probably damaging Het
Nudt15 A G 14: 73,523,296 probably null Het
Olfr633 T C 7: 103,946,752 F62S probably damaging Het
Olfr920 A G 9: 38,756,095 M136V possibly damaging Het
Parp14 A G 16: 35,857,435 V721A probably damaging Het
Pbp2 G T 6: 135,310,075 N91K probably damaging Het
Pde7b C A 10: 20,434,464 probably null Het
Pramel7 C A 2: 87,491,330 E120D possibly damaging Het
Rbbp5 C T 1: 132,498,080 T516M probably benign Het
Slc16a12 A G 19: 34,690,671 V28A possibly damaging Het
Slc6a9 T C 4: 117,864,605 F276S probably damaging Het
Spata9 A T 13: 75,993,074 I147L probably benign Het
Tenm4 A T 7: 96,896,064 Y2429F probably damaging Het
Tmtc1 A G 6: 148,411,066 S212P probably benign Het
Unc5cl A T 17: 48,459,963 I122F probably damaging Het
Unc79 T A 12: 103,165,684 F2350I probably damaging Het
Other mutations in Chuk
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00331:Chuk APN 19 44088023 missense possibly damaging 0.56
IGL00585:Chuk APN 19 44078312 missense probably damaging 0.99
IGL00662:Chuk APN 19 44097210 missense possibly damaging 0.64
IGL01419:Chuk APN 19 44096981 missense probably damaging 1.00
IGL01753:Chuk APN 19 44098576 splice site probably benign
PIT4362001:Chuk UTSW 19 44098583 critical splice donor site probably null
PIT4382001:Chuk UTSW 19 44098607 missense probably damaging 0.99
R0107:Chuk UTSW 19 44096919 missense probably damaging 1.00
R0107:Chuk UTSW 19 44096919 missense probably damaging 1.00
R0504:Chuk UTSW 19 44081938 splice site probably benign
R0731:Chuk UTSW 19 44103766 splice site probably benign
R0846:Chuk UTSW 19 44091028 missense probably damaging 1.00
R1433:Chuk UTSW 19 44078958 missense probably null 1.00
R1585:Chuk UTSW 19 44077373 missense possibly damaging 0.89
R2020:Chuk UTSW 19 44107343 missense possibly damaging 0.59
R2179:Chuk UTSW 19 44103721 missense possibly damaging 0.95
R2441:Chuk UTSW 19 44096921 missense probably damaging 1.00
R4125:Chuk UTSW 19 44100174 missense probably null 0.00
R4180:Chuk UTSW 19 44101840 missense probably benign 0.01
R4746:Chuk UTSW 19 44088771 missense possibly damaging 0.86
R4815:Chuk UTSW 19 44077247 nonsense probably null
R4852:Chuk UTSW 19 44088758 missense possibly damaging 0.91
R5330:Chuk UTSW 19 44078955 missense probably damaging 1.00
R5331:Chuk UTSW 19 44078955 missense probably damaging 1.00
R5517:Chuk UTSW 19 44097533 critical splice acceptor site probably null
R5854:Chuk UTSW 19 44081957 missense probably benign 0.00
R6149:Chuk UTSW 19 44101831 missense probably damaging 1.00
R6161:Chuk UTSW 19 44082637 missense probably damaging 1.00
R6232:Chuk UTSW 19 44096992 missense probably benign 0.21
R6768:Chuk UTSW 19 44096951 missense probably damaging 0.96
R6865:Chuk UTSW 19 44086915 nonsense probably null
R7916:Chuk UTSW 19 44096981 missense probably damaging 1.00
R8038:Chuk UTSW 19 44078977 missense probably damaging 1.00
R8064:Chuk UTSW 19 44082676 missense probably damaging 1.00
R8187:Chuk UTSW 19 44091112 missense probably benign 0.05
R8272:Chuk UTSW 19 44103736 missense possibly damaging 0.75
Posted On2014-01-21