Incidental Mutation 'IGL01734:Lrrc41'
ID 105642
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Lrrc41
Ensembl Gene ENSMUSG00000028703
Gene Name leucine rich repeat containing 41
Synonyms MUF1, D630045E04Rik, D730026A16Rik
Accession Numbers
Essential gene? Possibly non essential (E-score: 0.430) question?
Stock # IGL01734
Quality Score
Status
Chromosome 4
Chromosomal Location 115932466-115954240 bp(+) (GRCm39)
Type of Mutation critical splice donor site (2 bp from exon)
DNA Base Change (assembly) T to C at 115950331 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000030471 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000030471] [ENSMUST00000102704] [ENSMUST00000102705]
AlphaFold Q8K1C9
Predicted Effect probably null
Transcript: ENSMUST00000030471
SMART Domains Protein: ENSMUSP00000030471
Gene: ENSMUSG00000028703

DomainStartEndE-ValueType
low complexity region 30 45 N/A INTRINSIC
low complexity region 280 291 N/A INTRINSIC
low complexity region 314 325 N/A INTRINSIC
low complexity region 352 382 N/A INTRINSIC
low complexity region 417 429 N/A INTRINSIC
SCOP:d1yrga_ 449 742 4e-12 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000102704
SMART Domains Protein: ENSMUSP00000099765
Gene: ENSMUSG00000028702

DomainStartEndE-ValueType
DEXDc 149 357 1.66e-41 SMART
Blast:DEXDc 391 427 5e-13 BLAST
low complexity region 441 456 N/A INTRINSIC
HELICc 527 611 1.39e-20 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000102705
SMART Domains Protein: ENSMUSP00000099766
Gene: ENSMUSG00000028702

DomainStartEndE-ValueType
Pfam:Rad54_N 10 138 7.8e-9 PFAM
DEXDc 149 357 1.66e-41 SMART
Blast:DEXDc 391 427 5e-13 BLAST
low complexity region 441 456 N/A INTRINSIC
HELICc 527 611 1.39e-20 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000133799
Predicted Effect noncoding transcript
Transcript: ENSMUST00000134983
Predicted Effect noncoding transcript
Transcript: ENSMUST00000138952
Predicted Effect noncoding transcript
Transcript: ENSMUST00000139147
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 52 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4932442E05Rik T A 10: 118,697,371 (GRCm39) W210R possibly damaging Het
Aknad1 T C 3: 108,659,217 (GRCm39) M77T probably benign Het
Aox1 A T 1: 58,393,469 (GRCm39) I1210F possibly damaging Het
Brd8 A T 18: 34,747,858 (GRCm39) probably benign Het
Cdh23 T C 10: 60,139,292 (GRCm39) D3307G probably benign Het
Chsy1 T C 7: 65,821,058 (GRCm39) I431T probably damaging Het
Cobl A G 11: 12,204,980 (GRCm39) probably benign Het
Col28a1 T C 6: 8,158,134 (GRCm39) D308G probably damaging Het
Csmd3 A G 15: 48,048,700 (GRCm39) Y568H probably damaging Het
Dmrt3 T C 19: 25,599,947 (GRCm39) I264T probably damaging Het
Dusp22 G T 13: 30,880,235 (GRCm39) C52F probably damaging Het
Fbxw22 A C 9: 109,212,993 (GRCm39) M318R probably damaging Het
Ffar4 C T 19: 38,102,295 (GRCm39) T310M probably damaging Het
Fn1 A G 1: 71,658,644 (GRCm39) V1138A probably damaging Het
Glt6d1 T A 2: 25,684,505 (GRCm39) Y167F probably benign Het
Hydin T A 8: 111,217,421 (GRCm39) Y1436* probably null Het
Il12a G A 3: 68,598,888 (GRCm39) C2Y possibly damaging Het
Inpp5a T C 7: 139,034,006 (GRCm39) Y38H possibly damaging Het
Jmy A C 13: 93,596,159 (GRCm39) L490R probably damaging Het
Kif26a T A 12: 112,143,262 (GRCm39) L1172H probably benign Het
Kmo A T 1: 175,482,668 (GRCm39) M331L probably benign Het
Lonp1 G A 17: 56,923,026 (GRCm39) T627M probably damaging Het
Mast4 A T 13: 102,874,123 (GRCm39) S1556R probably damaging Het
Mmel1 A G 4: 154,976,408 (GRCm39) N490S probably benign Het
Mpped2 A G 2: 106,614,158 (GRCm39) D164G probably damaging Het
Nap1l1 A G 10: 111,328,760 (GRCm39) T230A probably benign Het
Nrap C A 19: 56,338,741 (GRCm39) A913S probably damaging Het
Nudt16 G T 9: 105,008,707 (GRCm39) Q65K probably benign Het
Or1e23 C A 11: 73,407,462 (GRCm39) A188S probably benign Het
Or5ac17 T G 16: 59,036,792 (GRCm39) L61F probably benign Het
Or5ac19 T A 16: 59,089,213 (GRCm39) K272N probably benign Het
Or5al5 T A 2: 85,962,012 (GRCm39) probably benign Het
Or6c76b T A 10: 129,692,671 (GRCm39) C95S probably benign Het
Parp14 A G 16: 35,678,970 (GRCm39) F333L probably benign Het
Pi4ka G T 16: 17,115,124 (GRCm39) Q1422K probably benign Het
Polr3c T C 3: 96,620,836 (GRCm39) E494G probably damaging Het
Prss42 C A 9: 110,627,411 (GRCm39) P49Q probably benign Het
Ptpra C T 2: 130,385,997 (GRCm39) T568I probably damaging Het
Ring1 T C 17: 34,242,294 (GRCm39) D71G probably damaging Het
Siae T A 9: 37,542,782 (GRCm39) S193T probably damaging Het
Slf2 T C 19: 44,961,706 (GRCm39) probably null Het
Spinkl T A 18: 44,307,639 (GRCm39) K7N possibly damaging Het
Tbk1 G A 10: 121,407,888 (GRCm39) R82* probably null Het
Tcf12 T C 9: 71,829,930 (GRCm39) probably null Het
Tcl1b5 G A 12: 105,145,214 (GRCm39) M59I probably benign Het
Thumpd3 C A 6: 113,043,806 (GRCm39) T407K probably damaging Het
Timm29 T C 9: 21,505,031 (GRCm39) V233A probably damaging Het
Tns3 A G 11: 8,469,192 (GRCm39) probably benign Het
Ubash3b T C 9: 40,937,543 (GRCm39) probably benign Het
Ugdh G T 5: 65,580,031 (GRCm39) T253K probably benign Het
Zfp143 T A 7: 109,671,416 (GRCm39) probably benign Het
Zfp738 A G 13: 67,831,563 (GRCm39) probably benign Het
Other mutations in Lrrc41
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01309:Lrrc41 APN 4 115,953,663 (GRCm39) missense probably damaging 0.97
IGL01358:Lrrc41 APN 4 115,932,784 (GRCm39) missense probably benign 0.16
IGL01986:Lrrc41 APN 4 115,946,519 (GRCm39) missense probably benign 0.27
IGL02159:Lrrc41 APN 4 115,945,683 (GRCm39) missense probably benign 0.03
IGL02892:Lrrc41 APN 4 115,946,032 (GRCm39) missense possibly damaging 0.68
IGL03135:Lrrc41 APN 4 115,945,728 (GRCm39) missense probably benign
R1478:Lrrc41 UTSW 4 115,952,405 (GRCm39) nonsense probably null
R1765:Lrrc41 UTSW 4 115,946,248 (GRCm39) missense possibly damaging 0.94
R2233:Lrrc41 UTSW 4 115,953,582 (GRCm39) missense possibly damaging 0.66
R4080:Lrrc41 UTSW 4 115,937,743 (GRCm39) splice site probably null
R4677:Lrrc41 UTSW 4 115,952,332 (GRCm39) missense probably benign
R4833:Lrrc41 UTSW 4 115,950,374 (GRCm39) unclassified probably benign
R4877:Lrrc41 UTSW 4 115,936,602 (GRCm39) missense probably damaging 0.99
R4926:Lrrc41 UTSW 4 115,946,521 (GRCm39) missense possibly damaging 0.46
R6459:Lrrc41 UTSW 4 115,945,977 (GRCm39) missense possibly damaging 0.95
R6817:Lrrc41 UTSW 4 115,946,502 (GRCm39) missense possibly damaging 0.66
R6834:Lrrc41 UTSW 4 115,953,726 (GRCm39) missense possibly damaging 0.46
R7479:Lrrc41 UTSW 4 115,946,238 (GRCm39) missense probably damaging 0.96
R7512:Lrrc41 UTSW 4 115,950,191 (GRCm39) missense possibly damaging 0.66
R7593:Lrrc41 UTSW 4 115,950,141 (GRCm39) missense possibly damaging 0.94
R8006:Lrrc41 UTSW 4 115,952,085 (GRCm39) missense possibly damaging 0.79
R8810:Lrrc41 UTSW 4 115,932,488 (GRCm39) unclassified probably benign
R9134:Lrrc41 UTSW 4 115,945,782 (GRCm39) missense possibly damaging 0.89
R9495:Lrrc41 UTSW 4 115,932,806 (GRCm39) critical splice donor site probably null
Posted On 2014-01-21