Incidental Mutation 'IGL00864:Lmbrd2'
ID12708
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Lmbrd2
Ensembl Gene ENSMUSG00000039704
Gene NameLMBR1 domain containing 2
Synonyms9930036E21Rik
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.178) question?
Stock #IGL00864
Quality Score
Status
Chromosome15
Chromosomal Location9140550-9202483 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to C at 9175210 bp
ZygosityHeterozygous
Amino Acid Change Serine to Proline at position 403 (S403P)
Ref Sequence ENSEMBL: ENSMUSP00000154020 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000090380] [ENSMUST00000227556]
Predicted Effect probably benign
Transcript: ENSMUST00000090380
SMART Domains Protein: ENSMUSP00000087858
Gene: ENSMUSG00000039704

DomainStartEndE-ValueType
Pfam:LMBR1 8 546 4.2e-192 PFAM
low complexity region 574 598 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000227216
Predicted Effect probably damaging
Transcript: ENSMUST00000227556
AA Change: S403P

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 21 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4921539E11Rik T C 4: 103,235,698 D142G probably damaging Het
Ap2b1 A C 11: 83,333,158 D195A probably damaging Het
Asxl3 T A 18: 22,522,446 I1171K probably benign Het
Atm T C 9: 53,533,933 S2G probably damaging Het
Crygd C T 1: 65,062,091 R115Q probably benign Het
Ephx1 A G 1: 180,990,451 S356P probably damaging Het
H1foo A G 6: 115,948,626 K128R probably damaging Het
Il12rb2 A G 6: 67,336,754 I6T probably benign Het
Itm2b T C 14: 73,363,135 K242E probably damaging Het
Kcnq5 T A 1: 21,505,763 Q239L probably damaging Het
Ola1 A T 2: 73,156,897 D130E probably benign Het
Opcml G A 9: 28,901,590 E193K probably damaging Het
Opcml A C 9: 28,901,591 E193A probably damaging Het
Rab44 T C 17: 29,139,737 S300P probably benign Het
Sergef C A 7: 46,515,663 probably null Het
Slc6a2 T C 8: 92,995,994 F540L probably benign Het
Spag6l A G 16: 16,780,733 V298A probably benign Het
Svep1 G T 4: 58,068,533 Y3084* probably null Het
Tbc1d4 T A 14: 101,444,566 D1235V probably benign Het
Tlr9 T C 9: 106,225,007 L499P probably damaging Het
Ttn G A 2: 76,713,834 S24609F probably damaging Het
Other mutations in Lmbrd2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00586:Lmbrd2 APN 15 9157295 missense probably damaging 1.00
IGL01554:Lmbrd2 APN 15 9165819 missense possibly damaging 0.96
IGL02142:Lmbrd2 APN 15 9186685 missense probably damaging 1.00
IGL02176:Lmbrd2 APN 15 9182574 missense probably damaging 1.00
IGL02293:Lmbrd2 APN 15 9172189 missense probably benign
IGL02692:Lmbrd2 APN 15 9149068 missense possibly damaging 0.94
IGL03101:Lmbrd2 APN 15 9186608 missense probably damaging 1.00
R0102:Lmbrd2 UTSW 15 9183952 missense probably damaging 1.00
R0370:Lmbrd2 UTSW 15 9165852 missense probably damaging 0.97
R0379:Lmbrd2 UTSW 15 9149479 missense probably benign 0.00
R0513:Lmbrd2 UTSW 15 9194729 missense probably damaging 1.00
R1610:Lmbrd2 UTSW 15 9186612 missense probably benign 0.19
R1628:Lmbrd2 UTSW 15 9182506 missense probably damaging 1.00
R1844:Lmbrd2 UTSW 15 9177751 nonsense probably null
R2422:Lmbrd2 UTSW 15 9194765 missense possibly damaging 0.83
R3614:Lmbrd2 UTSW 15 9177711 missense probably damaging 1.00
R3924:Lmbrd2 UTSW 15 9149537 missense probably benign
R4014:Lmbrd2 UTSW 15 9151585 splice site probably benign
R4298:Lmbrd2 UTSW 15 9165795 missense possibly damaging 0.92
R5126:Lmbrd2 UTSW 15 9194701 missense possibly damaging 0.91
R5699:Lmbrd2 UTSW 15 9175182 missense probably benign 0.40
R5841:Lmbrd2 UTSW 15 9182570 missense possibly damaging 0.94
R5974:Lmbrd2 UTSW 15 9172115 missense probably benign 0.25
R5988:Lmbrd2 UTSW 15 9182406 splice site probably null
R6179:Lmbrd2 UTSW 15 9149175 missense probably damaging 0.99
R6666:Lmbrd2 UTSW 15 9151569 missense probably benign 0.06
R7180:Lmbrd2 UTSW 15 9175196 missense possibly damaging 0.90
R7269:Lmbrd2 UTSW 15 9194684 missense probably damaging 1.00
R7341:Lmbrd2 UTSW 15 9165819 missense possibly damaging 0.96
R8017:Lmbrd2 UTSW 15 9172230 missense probably benign 0.00
R8066:Lmbrd2 UTSW 15 9172085 missense probably benign 0.35
R8110:Lmbrd2 UTSW 15 9175192 missense probably damaging 1.00
R8393:Lmbrd2 UTSW 15 9178350 missense probably damaging 1.00
R8401:Lmbrd2 UTSW 15 9156207 missense possibly damaging 0.85
Posted On2012-12-06