Incidental Mutation 'IGL00675:Vnn3'
ID 14802
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vnn3
Ensembl Gene ENSMUSG00000020010
Gene Name vanin 3
Synonyms
Accession Numbers
Essential gene? Probably non essential (E-score: 0.055) question?
Stock # IGL00675
Quality Score
Status
Chromosome 10
Chromosomal Location 23727360-23745741 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) G to T at 23743066 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Lysine to Asparagine at position 425 (K425N)
Ref Sequence ENSEMBL: ENSMUSP00000020190 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000020190]
AlphaFold Q9QZ25
Predicted Effect possibly damaging
Transcript: ENSMUST00000020190
AA Change: K425N

PolyPhen 2 Score 0.769 (Sensitivity: 0.85; Specificity: 0.92)
SMART Domains Protein: ENSMUSP00000020190
Gene: ENSMUSG00000020010
AA Change: K425N

DomainStartEndE-ValueType
signal peptide 1 22 N/A INTRINSIC
Pfam:CN_hydrolase 51 296 6.9e-19 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 17 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca5 A T 11: 110,195,811 (GRCm39) D549E probably damaging Het
Abcc9 A G 6: 142,610,347 (GRCm39) F606L probably damaging Het
Bltp3a C T 17: 28,095,891 (GRCm39) probably benign Het
Canx A G 11: 50,191,823 (GRCm39) S363P possibly damaging Het
Cdh6 T C 15: 13,041,525 (GRCm39) D513G possibly damaging Het
Cyp11a1 G T 9: 57,926,596 (GRCm39) G111W probably damaging Het
Dnm1l A G 16: 16,151,691 (GRCm39) probably null Het
Dsg1b T A 18: 20,524,975 (GRCm39) L137* probably null Het
Kcnh5 A T 12: 75,160,963 (GRCm39) probably null Het
Kcnu1 A G 8: 26,341,877 (GRCm39) E74G probably benign Het
Nlrp9b T A 7: 19,757,111 (GRCm39) I116K possibly damaging Het
Notch2 T C 3: 98,018,991 (GRCm39) Y718H possibly damaging Het
Prkdc T C 16: 15,605,022 (GRCm39) L2980P probably benign Het
Samm50 C T 15: 84,084,576 (GRCm39) S171F possibly damaging Het
Saraf T A 8: 34,634,962 (GRCm39) S288T probably benign Het
Ubr5 C T 15: 38,018,528 (GRCm39) V865I possibly damaging Het
Zswim8 T C 14: 20,766,969 (GRCm39) probably benign Het
Other mutations in Vnn3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01300:Vnn3 APN 10 23,740,263 (GRCm39) missense possibly damaging 0.87
IGL01349:Vnn3 APN 10 23,727,814 (GRCm39) missense probably damaging 0.99
IGL02491:Vnn3 APN 10 23,741,816 (GRCm39) missense probably benign 0.11
IGL03256:Vnn3 APN 10 23,727,698 (GRCm39) splice site probably benign
IGL03289:Vnn3 APN 10 23,741,735 (GRCm39) missense possibly damaging 0.92
IGL02799:Vnn3 UTSW 10 23,727,869 (GRCm39) missense possibly damaging 0.64
R0599:Vnn3 UTSW 10 23,741,603 (GRCm39) missense possibly damaging 0.94
R1703:Vnn3 UTSW 10 23,741,828 (GRCm39) missense probably benign
R1753:Vnn3 UTSW 10 23,741,718 (GRCm39) missense probably benign 0.27
R2119:Vnn3 UTSW 10 23,740,311 (GRCm39) missense probably damaging 1.00
R2288:Vnn3 UTSW 10 23,740,354 (GRCm39) missense probably benign 0.03
R4255:Vnn3 UTSW 10 23,741,720 (GRCm39) missense probably benign 0.18
R4458:Vnn3 UTSW 10 23,741,567 (GRCm39) missense probably benign 0.23
R4518:Vnn3 UTSW 10 23,743,124 (GRCm39) missense possibly damaging 0.77
R4545:Vnn3 UTSW 10 23,732,224 (GRCm39) missense probably benign 0.00
R4723:Vnn3 UTSW 10 23,727,589 (GRCm39) missense possibly damaging 0.88
R4791:Vnn3 UTSW 10 23,740,519 (GRCm39) missense probably benign
R4921:Vnn3 UTSW 10 23,740,473 (GRCm39) missense probably benign 0.01
R5152:Vnn3 UTSW 10 23,740,237 (GRCm39) missense probably benign 0.01
R5390:Vnn3 UTSW 10 23,727,483 (GRCm39) start codon destroyed probably null 1.00
R5545:Vnn3 UTSW 10 23,742,992 (GRCm39) missense probably benign 0.00
R6197:Vnn3 UTSW 10 23,732,187 (GRCm39) missense probably damaging 1.00
R6751:Vnn3 UTSW 10 23,745,523 (GRCm39) missense probably benign 0.00
R6846:Vnn3 UTSW 10 23,727,620 (GRCm39) missense probably benign
R6917:Vnn3 UTSW 10 23,741,832 (GRCm39) missense possibly damaging 0.50
R7073:Vnn3 UTSW 10 23,740,311 (GRCm39) missense probably damaging 1.00
R7100:Vnn3 UTSW 10 23,741,840 (GRCm39) missense probably damaging 1.00
R7152:Vnn3 UTSW 10 23,727,513 (GRCm39) missense possibly damaging 0.88
R7336:Vnn3 UTSW 10 23,727,806 (GRCm39) missense probably benign 0.42
R7421:Vnn3 UTSW 10 23,741,666 (GRCm39) missense probably benign 0.06
R7875:Vnn3 UTSW 10 23,743,146 (GRCm39) missense possibly damaging 0.80
R8353:Vnn3 UTSW 10 23,745,443 (GRCm39) missense probably benign 0.01
R8453:Vnn3 UTSW 10 23,745,443 (GRCm39) missense probably benign 0.01
R8465:Vnn3 UTSW 10 23,741,780 (GRCm39) missense possibly damaging 0.67
R9105:Vnn3 UTSW 10 23,740,461 (GRCm39) missense probably damaging 1.00
R9261:Vnn3 UTSW 10 23,741,607 (GRCm39) missense probably damaging 0.97
R9441:Vnn3 UTSW 10 23,740,498 (GRCm39) missense possibly damaging 0.94
R9718:Vnn3 UTSW 10 23,745,454 (GRCm39) nonsense probably null
R9737:Vnn3 UTSW 10 23,741,813 (GRCm39) missense probably benign 0.02
Posted On 2012-12-06