Incidental Mutation 'R0077:Vmn2r73'
ID 150639
Institutional Source Beutler Lab
Gene Symbol Vmn2r73
Ensembl Gene ENSMUSG00000070458
Gene Name vomeronasal 2, receptor 73
Synonyms EG620928
MMRRC Submission 038364-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.172) question?
Stock # R0077 (G1)
Quality Score 141
Status Validated
Chromosome 7
Chromosomal Location 85506755-85525146 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 85525075 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Arginine to Serine at position 24 (R24S)
Ref Sequence ENSEMBL: ENSMUSP00000076687 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000077478]
AlphaFold D3Z7M3
Predicted Effect probably benign
Transcript: ENSMUST00000077478
AA Change: R24S

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
SMART Domains Protein: ENSMUSP00000076687
Gene: ENSMUSG00000070458
AA Change: R24S

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:ANF_receptor 77 465 1.4e-30 PFAM
Pfam:NCD3G 508 560 5.9e-21 PFAM
Pfam:7tm_3 590 827 4.4e-51 PFAM
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 98.9%
  • 3x: 97.9%
  • 10x: 95.4%
  • 20x: 90.5%
Validation Efficiency 83% (159/192)
Allele List at MGI
Other mutations in this stock
Total: 73 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adgrl3 T C 5: 81,919,532 (GRCm39) probably benign Het
Adgrl4 A G 3: 151,223,418 (GRCm39) I624V probably damaging Het
AI661453 A G 17: 47,780,287 (GRCm39) probably benign Het
Alg12 C T 15: 88,700,181 (GRCm39) E60K probably damaging Het
Angel2 A T 1: 190,665,284 (GRCm39) N72Y possibly damaging Het
Ank1 C A 8: 23,630,183 (GRCm39) P81Q probably damaging Het
Atp6v1c2 A T 12: 17,371,613 (GRCm39) D61E probably damaging Het
Bpi T A 2: 158,103,254 (GRCm39) M83K probably damaging Het
Capn7 A G 14: 31,090,072 (GRCm39) I642V probably benign Het
Ccdc134 T C 15: 82,015,938 (GRCm39) probably benign Het
Ccr3 C T 9: 123,829,061 (GRCm39) T132I probably damaging Het
Cfap65 C A 1: 74,971,077 (GRCm39) W80C probably damaging Het
Chaf1a T A 17: 56,354,384 (GRCm39) I218K unknown Het
Ddx23 A G 15: 98,554,481 (GRCm39) probably null Het
Dmkn A G 7: 30,464,719 (GRCm39) S231G probably benign Het
Ep300 T C 15: 81,525,514 (GRCm39) I1446T unknown Het
Fmnl1 T C 11: 103,080,795 (GRCm39) F318S probably damaging Het
Grik5 A T 7: 24,722,805 (GRCm39) V497E probably damaging Het
Gtf2ird2 T C 5: 134,242,925 (GRCm39) Y380H probably damaging Het
Hecw2 C T 1: 53,907,990 (GRCm39) probably benign Het
Hspb7 A G 4: 141,151,358 (GRCm39) I167V probably damaging Het
Kcnh2 T A 5: 24,527,700 (GRCm39) N884I probably benign Het
Krba1 T C 6: 48,382,159 (GRCm39) probably benign Het
Krt18 G T 15: 101,939,409 (GRCm39) R294L probably benign Het
Lctl T A 9: 64,029,389 (GRCm39) M1K probably null Het
Lingo2 G A 4: 35,708,375 (GRCm39) S535F possibly damaging Het
Lrba A C 3: 86,449,995 (GRCm39) N2105H probably damaging Het
Lrrc10 A G 10: 116,881,419 (GRCm39) D31G probably damaging Het
Lrrtm1 T A 6: 77,220,855 (GRCm39) V104E probably damaging Het
Mgat3 C T 15: 80,096,778 (GRCm39) T535I probably benign Het
Nav3 T C 10: 109,552,503 (GRCm39) I1780V possibly damaging Het
Nlrc4 A G 17: 74,753,826 (GRCm39) W186R probably damaging Het
Nr2c1 T A 10: 94,024,117 (GRCm39) F441I probably benign Het
Obscn A G 11: 58,942,347 (GRCm39) probably benign Het
Or1p1 T C 11: 74,179,501 (GRCm39) F10L probably benign Het
Or2a56 T C 6: 42,932,707 (GRCm39) S92P probably benign Het
Or56b34 T C 7: 104,937,726 (GRCm39) V142A probably damaging Het
Or5au1 T C 14: 52,273,442 (GRCm39) N42S possibly damaging Het
Osr1 A T 12: 9,629,691 (GRCm39) Y188F probably damaging Het
Pak2 A T 16: 31,852,661 (GRCm39) N293K possibly damaging Het
Pappa A T 4: 65,226,049 (GRCm39) T1301S probably damaging Het
Pde4dip G A 3: 97,660,442 (GRCm39) Q679* probably null Het
Pik3r5 T A 11: 68,377,448 (GRCm39) probably null Het
Plbd2 C T 5: 120,624,104 (GRCm39) probably null Het
Ppp1r3a G T 6: 14,754,516 (GRCm39) P244T possibly damaging Het
Pum1 C A 4: 130,499,985 (GRCm39) R960S probably benign Het
Ralgapb T C 2: 158,315,169 (GRCm39) Y845H probably damaging Het
Rbms1 A T 2: 60,589,179 (GRCm39) M287K possibly damaging Het
Rdh1 A T 10: 127,595,906 (GRCm39) I34F probably damaging Het
Rgl3 T A 9: 21,885,398 (GRCm39) Q644L probably benign Het
Rpap2 T C 5: 107,768,340 (GRCm39) S393P probably damaging Het
Rsad2 T C 12: 26,506,376 (GRCm39) S15G probably damaging Het
Rspo1 G A 4: 124,885,190 (GRCm39) R22Q probably benign Het
S100a11 A C 3: 93,431,509 (GRCm39) probably null Het
Septin4 T C 11: 87,472,022 (GRCm39) S11P probably benign Het
Serpina1c T C 12: 103,862,350 (GRCm39) S322G probably benign Het
Setdb1 A T 3: 95,248,762 (GRCm39) C385S probably damaging Het
Shank2 A T 7: 143,746,204 (GRCm39) I193F possibly damaging Het
Slc4a11 G T 2: 130,528,221 (GRCm39) probably benign Het
Snrnp40 C G 4: 130,271,836 (GRCm39) probably null Het
Tbcd C A 11: 121,485,100 (GRCm39) Q761K probably benign Het
Tmed6 C T 8: 107,792,198 (GRCm39) V16M probably damaging Het
Tmem229a T C 6: 24,955,701 (GRCm39) T18A probably benign Het
Tsc1 T A 2: 28,568,955 (GRCm39) probably benign Het
Ube2m T C 7: 12,769,657 (GRCm39) N49D probably damaging Het
Ubqlnl T C 7: 103,799,254 (GRCm39) D81G probably damaging Het
Vmn2r56 A G 7: 12,449,332 (GRCm39) V302A probably benign Het
Wfs1 C A 5: 37,130,538 (GRCm39) S236I probably damaging Het
Xpot A T 10: 121,441,544 (GRCm39) N560K probably benign Het
Yipf3 A G 17: 46,562,503 (GRCm39) T303A probably benign Het
Zfp790 T C 7: 29,524,300 (GRCm39) W19R probably damaging Het
Zfp846 T C 9: 20,505,303 (GRCm39) C388R probably benign Het
Zpr1 T A 9: 46,184,634 (GRCm39) I47N probably damaging Het
Other mutations in Vmn2r73
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00158:Vmn2r73 APN 7 85,506,795 (GRCm39) missense
IGL01151:Vmn2r73 APN 7 85,507,086 (GRCm39) missense probably damaging 0.99
IGL01408:Vmn2r73 APN 7 85,521,455 (GRCm39) missense probably benign 0.45
IGL01505:Vmn2r73 APN 7 85,507,267 (GRCm39) nonsense probably null
IGL01731:Vmn2r73 APN 7 85,506,757 (GRCm39) makesense probably null
IGL01818:Vmn2r73 APN 7 85,519,109 (GRCm39) splice site probably benign
IGL02236:Vmn2r73 APN 7 85,521,902 (GRCm39) missense probably benign 0.00
IGL02265:Vmn2r73 APN 7 85,520,847 (GRCm39) missense probably benign 0.02
IGL02266:Vmn2r73 APN 7 85,525,007 (GRCm39) missense possibly damaging 0.52
IGL02276:Vmn2r73 APN 7 85,518,980 (GRCm39) critical splice donor site probably null
IGL02284:Vmn2r73 APN 7 85,507,123 (GRCm39) missense possibly damaging 0.92
IGL02380:Vmn2r73 APN 7 85,507,383 (GRCm39) missense probably benign 0.00
IGL02466:Vmn2r73 APN 7 85,522,084 (GRCm39) missense probably damaging 1.00
IGL03172:Vmn2r73 APN 7 85,507,495 (GRCm39) missense probably benign 0.01
IGL03179:Vmn2r73 APN 7 85,519,468 (GRCm39) missense probably benign 0.04
G1Funyon:Vmn2r73 UTSW 7 85,507,510 (GRCm39) missense probably benign 0.00
R0311:Vmn2r73 UTSW 7 85,520,997 (GRCm39) missense probably benign
R0413:Vmn2r73 UTSW 7 85,521,087 (GRCm39) missense possibly damaging 0.68
R0494:Vmn2r73 UTSW 7 85,522,140 (GRCm39) missense probably benign
R1523:Vmn2r73 UTSW 7 85,519,486 (GRCm39) missense probably benign 0.02
R1618:Vmn2r73 UTSW 7 85,525,120 (GRCm39) nonsense probably null
R1667:Vmn2r73 UTSW 7 85,506,889 (GRCm39) missense probably benign 0.00
R1728:Vmn2r73 UTSW 7 85,507,086 (GRCm39) missense probably damaging 1.00
R1729:Vmn2r73 UTSW 7 85,507,086 (GRCm39) missense probably damaging 1.00
R1747:Vmn2r73 UTSW 7 85,507,375 (GRCm39) missense probably damaging 1.00
R1784:Vmn2r73 UTSW 7 85,507,086 (GRCm39) missense probably damaging 1.00
R2152:Vmn2r73 UTSW 7 85,506,936 (GRCm39) missense probably benign 0.03
R2395:Vmn2r73 UTSW 7 85,506,975 (GRCm39) missense probably damaging 1.00
R2415:Vmn2r73 UTSW 7 85,521,431 (GRCm39) missense probably damaging 1.00
R2926:Vmn2r73 UTSW 7 85,520,871 (GRCm39) missense probably benign 0.17
R3719:Vmn2r73 UTSW 7 85,519,582 (GRCm39) missense probably damaging 1.00
R3766:Vmn2r73 UTSW 7 85,521,198 (GRCm39) missense probably benign
R3838:Vmn2r73 UTSW 7 85,507,258 (GRCm39) missense probably benign 0.00
R3890:Vmn2r73 UTSW 7 85,507,144 (GRCm39) missense probably benign
R4030:Vmn2r73 UTSW 7 85,521,044 (GRCm39) missense possibly damaging 0.92
R4247:Vmn2r73 UTSW 7 85,521,883 (GRCm39) missense probably damaging 0.99
R4409:Vmn2r73 UTSW 7 85,520,768 (GRCm39) missense probably damaging 0.97
R4427:Vmn2r73 UTSW 7 85,506,981 (GRCm39) missense probably damaging 1.00
R4430:Vmn2r73 UTSW 7 85,519,449 (GRCm39) missense probably benign
R4552:Vmn2r73 UTSW 7 85,525,055 (GRCm39) missense probably benign 0.12
R4779:Vmn2r73 UTSW 7 85,520,923 (GRCm39) nonsense probably null
R4906:Vmn2r73 UTSW 7 85,506,829 (GRCm39) missense probably damaging 0.99
R4942:Vmn2r73 UTSW 7 85,519,582 (GRCm39) missense probably damaging 1.00
R5280:Vmn2r73 UTSW 7 85,507,155 (GRCm39) missense probably damaging 0.98
R5344:Vmn2r73 UTSW 7 85,525,046 (GRCm39) missense probably benign 0.00
R5478:Vmn2r73 UTSW 7 85,518,996 (GRCm39) missense probably damaging 1.00
R5527:Vmn2r73 UTSW 7 85,507,575 (GRCm39) missense possibly damaging 0.65
R5691:Vmn2r73 UTSW 7 85,507,299 (GRCm39) missense probably damaging 1.00
R5826:Vmn2r73 UTSW 7 85,524,956 (GRCm39) missense possibly damaging 0.77
R6018:Vmn2r73 UTSW 7 85,521,875 (GRCm39) missense possibly damaging 0.48
R6082:Vmn2r73 UTSW 7 85,507,429 (GRCm39) missense probably benign 0.00
R6111:Vmn2r73 UTSW 7 85,520,997 (GRCm39) missense probably benign
R6233:Vmn2r73 UTSW 7 85,519,099 (GRCm39) missense probably benign 0.00
R6278:Vmn2r73 UTSW 7 85,522,140 (GRCm39) missense probably benign
R6283:Vmn2r73 UTSW 7 85,521,049 (GRCm39) missense probably benign 0.00
R6307:Vmn2r73 UTSW 7 85,506,828 (GRCm39) missense probably damaging 1.00
R6413:Vmn2r73 UTSW 7 85,519,544 (GRCm39) nonsense probably null
R6782:Vmn2r73 UTSW 7 85,519,563 (GRCm39) missense probably benign 0.00
R6884:Vmn2r73 UTSW 7 85,507,213 (GRCm39) missense probably benign 0.05
R6921:Vmn2r73 UTSW 7 85,507,446 (GRCm39) missense probably benign 0.27
R7169:Vmn2r73 UTSW 7 85,507,663 (GRCm39) nonsense probably null
R7206:Vmn2r73 UTSW 7 85,522,075 (GRCm39) missense probably benign 0.03
R7311:Vmn2r73 UTSW 7 85,521,192 (GRCm39) missense possibly damaging 0.80
R7650:Vmn2r73 UTSW 7 85,521,147 (GRCm39) missense probably benign
R7811:Vmn2r73 UTSW 7 85,524,956 (GRCm39) missense possibly damaging 0.77
R8263:Vmn2r73 UTSW 7 85,507,619 (GRCm39) missense probably benign
R8301:Vmn2r73 UTSW 7 85,507,510 (GRCm39) missense probably benign 0.00
R8341:Vmn2r73 UTSW 7 85,507,128 (GRCm39) missense probably benign 0.01
R8500:Vmn2r73 UTSW 7 85,519,638 (GRCm39) missense probably benign 0.01
R8673:Vmn2r73 UTSW 7 85,521,902 (GRCm39) missense probably benign 0.01
R8719:Vmn2r73 UTSW 7 85,521,095 (GRCm39) missense probably damaging 0.96
R8783:Vmn2r73 UTSW 7 85,507,668 (GRCm39) missense probably damaging 0.96
R8828:Vmn2r73 UTSW 7 85,521,179 (GRCm39) missense probably damaging 0.98
R8860:Vmn2r73 UTSW 7 85,522,149 (GRCm39) splice site probably benign
R9002:Vmn2r73 UTSW 7 85,507,284 (GRCm39) missense probably benign 0.32
R9008:Vmn2r73 UTSW 7 85,521,904 (GRCm39) missense probably damaging 0.96
R9159:Vmn2r73 UTSW 7 85,521,931 (GRCm39) missense possibly damaging 0.90
R9180:Vmn2r73 UTSW 7 85,507,123 (GRCm39) missense probably benign 0.07
R9198:Vmn2r73 UTSW 7 85,518,987 (GRCm39) missense probably benign 0.01
R9329:Vmn2r73 UTSW 7 85,519,073 (GRCm39) missense probably benign
R9448:Vmn2r73 UTSW 7 85,522,027 (GRCm39) missense probably benign 0.00
R9463:Vmn2r73 UTSW 7 85,506,795 (GRCm39) missense
R9589:Vmn2r73 UTSW 7 85,519,659 (GRCm39) missense probably benign 0.03
X0023:Vmn2r73 UTSW 7 85,507,664 (GRCm39) missense probably benign 0.31
Z1176:Vmn2r73 UTSW 7 85,521,176 (GRCm39) missense probably damaging 0.99
Z1177:Vmn2r73 UTSW 7 85,521,480 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- GGTATCCATGCTGACAGATGGAACATT -3'
(R):5'- TCATCCAGAGGCAAACAAGGAACTG -3'

Sequencing Primer
(F):5'- ACAGTGGGTCATTCATTCAGC -3'
(R):5'- GTAATAAATAGTGACACTTGCCTGG -3'
Posted On 2014-01-24