Incidental Mutation 'R1246:Nol8'
ID |
152159 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Nol8
|
Ensembl Gene |
ENSMUSG00000021392 |
Gene Name |
nucleolar protein 8 |
Synonyms |
5730412B09Rik, D13Ertd548e, 4921532D18Rik |
MMRRC Submission |
039313-MU
|
Accession Numbers |
|
Essential gene? |
Essential
(E-score: 1.000)
|
Stock # |
R1246 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
13 |
Chromosomal Location |
49653078-49679016 bp(+) (GRCm38) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to A
at 49676769 bp (GRCm38)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Tryptophan to Arginine
at position 1110
(W1110R)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000152878
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000021824]
[ENSMUST00000221142]
[ENSMUST00000222197]
[ENSMUST00000223467]
|
AlphaFold |
Q3UHX0 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000021824
AA Change: W1128R
PolyPhen 2
Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
|
SMART Domains |
Protein: ENSMUSP00000021824 Gene: ENSMUSG00000021392 AA Change: W1128R
Domain | Start | End | E-Value | Type |
RRM
|
27 |
103 |
3.02e-9 |
SMART |
low complexity region
|
315 |
327 |
N/A |
INTRINSIC |
low complexity region
|
454 |
468 |
N/A |
INTRINSIC |
low complexity region
|
712 |
724 |
N/A |
INTRINSIC |
low complexity region
|
804 |
816 |
N/A |
INTRINSIC |
low complexity region
|
836 |
849 |
N/A |
INTRINSIC |
coiled coil region
|
886 |
916 |
N/A |
INTRINSIC |
coiled coil region
|
955 |
981 |
N/A |
INTRINSIC |
low complexity region
|
1080 |
1093 |
N/A |
INTRINSIC |
low complexity region
|
1152 |
1164 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000221142
AA Change: W1110R
PolyPhen 2
Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000221328
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000222197
AA Change: W1128R
PolyPhen 2
Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000223467
AA Change: W1110R
PolyPhen 2
Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
|
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.3%
- 10x: 96.3%
- 20x: 92.7%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] NOL8 binds Ras-related GTP-binding proteins (see MIM 608267) and plays a role in cell growth (Sekiguchi et al., 2004 [PubMed 14660641]).[supplied by OMIM, Mar 2008]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 14 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
1700029F12Rik |
T |
C |
13: 97,030,295 |
D71G |
unknown |
Het |
Gm11563 |
T |
C |
11: 99,658,848 |
T27A |
unknown |
Het |
Gm7361 |
G |
T |
5: 26,261,227 |
E196* |
probably null |
Het |
Ltbp1 |
T |
A |
17: 75,385,161 |
Y1273* |
probably null |
Het |
Olfr547 |
T |
A |
7: 102,534,942 |
L65H |
probably damaging |
Het |
Olfr661 |
C |
A |
7: 104,688,164 |
L50I |
possibly damaging |
Het |
Olfr906 |
T |
C |
9: 38,488,790 |
S254P |
probably damaging |
Het |
Pde4d |
T |
A |
13: 109,950,973 |
W625R |
probably damaging |
Het |
Pigg |
T |
C |
5: 108,341,820 |
Y631H |
probably damaging |
Het |
Pik3cd |
A |
G |
4: 149,659,800 |
Y165H |
probably damaging |
Het |
Rap1gap |
A |
G |
4: 137,712,094 |
E114G |
possibly damaging |
Het |
Tubb2b |
G |
A |
13: 34,128,147 |
T221I |
possibly damaging |
Het |
Ythdf2 |
G |
A |
4: 132,204,871 |
T326M |
probably benign |
Het |
Zzef1 |
A |
G |
11: 72,874,909 |
I1421V |
probably benign |
Het |
|
Other mutations in Nol8 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00801:Nol8
|
APN |
13 |
49662228 |
missense |
probably benign |
0.01 |
IGL01106:Nol8
|
APN |
13 |
49654481 |
missense |
possibly damaging |
0.46 |
IGL01413:Nol8
|
APN |
13 |
49659952 |
missense |
possibly damaging |
0.82 |
IGL01540:Nol8
|
APN |
13 |
49661670 |
missense |
probably benign |
0.06 |
IGL01670:Nol8
|
APN |
13 |
49661308 |
missense |
possibly damaging |
0.54 |
IGL01672:Nol8
|
APN |
13 |
49675407 |
missense |
possibly damaging |
0.95 |
IGL02032:Nol8
|
APN |
13 |
49672772 |
missense |
probably benign |
|
IGL02212:Nol8
|
APN |
13 |
49662150 |
missense |
possibly damaging |
0.87 |
IGL02323:Nol8
|
APN |
13 |
49655245 |
splice site |
probably benign |
|
IGL02645:Nol8
|
APN |
13 |
49665471 |
critical splice donor site |
probably null |
|
IGL02949:Nol8
|
APN |
13 |
49662402 |
missense |
probably benign |
0.01 |
IGL02954:Nol8
|
APN |
13 |
49661172 |
missense |
probably benign |
0.01 |
IGL03182:Nol8
|
APN |
13 |
49664081 |
missense |
probably damaging |
1.00 |
IGL03406:Nol8
|
APN |
13 |
49661568 |
missense |
probably damaging |
1.00 |
P0047:Nol8
|
UTSW |
13 |
49654348 |
splice site |
probably null |
|
R0092:Nol8
|
UTSW |
13 |
49662447 |
missense |
possibly damaging |
0.54 |
R0099:Nol8
|
UTSW |
13 |
49672689 |
missense |
probably benign |
|
R0145:Nol8
|
UTSW |
13 |
49662447 |
missense |
possibly damaging |
0.54 |
R0269:Nol8
|
UTSW |
13 |
49654445 |
missense |
possibly damaging |
0.49 |
R0370:Nol8
|
UTSW |
13 |
49662447 |
missense |
possibly damaging |
0.54 |
R0374:Nol8
|
UTSW |
13 |
49662447 |
missense |
possibly damaging |
0.54 |
R0390:Nol8
|
UTSW |
13 |
49662152 |
missense |
probably damaging |
1.00 |
R0617:Nol8
|
UTSW |
13 |
49654445 |
missense |
possibly damaging |
0.49 |
R0635:Nol8
|
UTSW |
13 |
49676758 |
missense |
probably benign |
0.05 |
R0637:Nol8
|
UTSW |
13 |
49662447 |
missense |
possibly damaging |
0.54 |
R1446:Nol8
|
UTSW |
13 |
49655227 |
missense |
probably damaging |
1.00 |
R1464:Nol8
|
UTSW |
13 |
49676788 |
missense |
probably benign |
|
R1464:Nol8
|
UTSW |
13 |
49676788 |
missense |
probably benign |
|
R1627:Nol8
|
UTSW |
13 |
49661504 |
missense |
probably benign |
0.01 |
R1703:Nol8
|
UTSW |
13 |
49667457 |
missense |
possibly damaging |
0.65 |
R1751:Nol8
|
UTSW |
13 |
49667408 |
missense |
probably benign |
0.06 |
R2187:Nol8
|
UTSW |
13 |
49661999 |
missense |
probably benign |
0.00 |
R2357:Nol8
|
UTSW |
13 |
49654504 |
critical splice donor site |
probably null |
|
R3081:Nol8
|
UTSW |
13 |
49678392 |
unclassified |
probably benign |
|
R3969:Nol8
|
UTSW |
13 |
49660016 |
nonsense |
probably null |
|
R4199:Nol8
|
UTSW |
13 |
49661748 |
missense |
possibly damaging |
0.65 |
R4720:Nol8
|
UTSW |
13 |
49662753 |
missense |
probably damaging |
1.00 |
R4927:Nol8
|
UTSW |
13 |
49654425 |
missense |
possibly damaging |
0.79 |
R5177:Nol8
|
UTSW |
13 |
49661112 |
missense |
probably benign |
0.32 |
R5512:Nol8
|
UTSW |
13 |
49676787 |
missense |
probably benign |
|
R5744:Nol8
|
UTSW |
13 |
49662326 |
missense |
possibly damaging |
0.82 |
R5988:Nol8
|
UTSW |
13 |
49672614 |
missense |
possibly damaging |
0.58 |
R6048:Nol8
|
UTSW |
13 |
49653684 |
critical splice donor site |
probably null |
|
R6306:Nol8
|
UTSW |
13 |
49676353 |
missense |
probably damaging |
1.00 |
R6359:Nol8
|
UTSW |
13 |
49664070 |
missense |
probably benign |
0.16 |
R6378:Nol8
|
UTSW |
13 |
49667355 |
missense |
probably damaging |
1.00 |
R6655:Nol8
|
UTSW |
13 |
49654392 |
missense |
probably damaging |
1.00 |
R7035:Nol8
|
UTSW |
13 |
49661202 |
missense |
probably benign |
0.06 |
R7058:Nol8
|
UTSW |
13 |
49676386 |
missense |
probably damaging |
1.00 |
R7368:Nol8
|
UTSW |
13 |
49661219 |
missense |
probably benign |
0.00 |
R7450:Nol8
|
UTSW |
13 |
49660015 |
missense |
probably benign |
0.01 |
R7673:Nol8
|
UTSW |
13 |
49664780 |
missense |
probably benign |
0.15 |
R7750:Nol8
|
UTSW |
13 |
49662266 |
missense |
possibly damaging |
0.83 |
R8246:Nol8
|
UTSW |
13 |
49655248 |
splice site |
probably benign |
|
R9081:Nol8
|
UTSW |
13 |
49661405 |
missense |
probably benign |
0.00 |
R9127:Nol8
|
UTSW |
13 |
49661999 |
missense |
probably benign |
0.00 |
R9223:Nol8
|
UTSW |
13 |
49661262 |
missense |
possibly damaging |
0.63 |
X0020:Nol8
|
UTSW |
13 |
49661165 |
missense |
probably benign |
0.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TTCCATTCAGTGGTGTGGGACAAG -3'
(R):5'- GTCAGTCAAGTCAATCTGCCCTCC -3'
Sequencing Primer
(F):5'- TACATTCTGAGGGCCAAGTG -3'
(R):5'- ctcccttccttccttccttc -3'
|
Posted On |
2014-01-29 |