Incidental Mutation 'R1237:Vmn2r84'
ID 152464
Institutional Source Beutler Lab
Gene Symbol Vmn2r84
Ensembl Gene ENSMUSG00000070601
Gene Name vomeronasal 2, receptor 84
Synonyms EG625068
MMRRC Submission 039304-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.070) question?
Stock # R1237 (G1)
Quality Score 225
Status Validated
Chromosome 10
Chromosomal Location 130221669-130230110 bp(-) (GRCm39)
Type of Mutation splice site (3 bp from exon)
DNA Base Change (assembly) T to A at 130223725 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000092079 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000094502]
AlphaFold D3YWE3
Predicted Effect probably null
Transcript: ENSMUST00000094502
SMART Domains Protein: ENSMUSP00000092079
Gene: ENSMUSG00000070601

DomainStartEndE-ValueType
signal peptide 1 21 N/A INTRINSIC
Pfam:ANF_receptor 77 448 1.3e-27 PFAM
Pfam:NCD3G 508 561 6.9e-21 PFAM
Pfam:7tm_3 594 830 4.6e-55 PFAM
Meta Mutation Damage Score 0.9755 question?
Coding Region Coverage
  • 1x: 99.0%
  • 3x: 98.2%
  • 10x: 95.9%
  • 20x: 91.8%
Validation Efficiency 98% (40/41)
Allele List at MGI
Other mutations in this stock
Total: 38 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcg3 T C 5: 105,096,223 (GRCm39) T500A probably damaging Het
Amz1 A T 5: 140,727,039 (GRCm39) M1L probably damaging Het
Angptl1 T A 1: 156,686,154 (GRCm39) N413K probably damaging Het
Ankrd13b T C 11: 77,365,400 (GRCm39) T70A probably damaging Het
Cacna1c C T 6: 118,589,586 (GRCm39) R1446H probably damaging Het
Ccdc174 C T 6: 91,867,768 (GRCm39) probably benign Het
Ccnc T A 4: 21,730,457 (GRCm39) F31L probably benign Het
Celsr1 A C 15: 85,788,175 (GRCm39) S2692R probably benign Het
Chd1l C T 3: 97,490,047 (GRCm39) E503K probably benign Het
Ddhd1 A T 14: 45,839,107 (GRCm39) D65E probably benign Het
Dync1h1 A G 12: 110,632,393 (GRCm39) N4504S probably benign Het
Enthd1 A G 15: 80,418,799 (GRCm39) S167P probably damaging Het
Fat1 A T 8: 45,497,316 (GRCm39) Y4267F probably damaging Het
Hectd4 C T 5: 121,459,570 (GRCm39) A813V possibly damaging Het
Ibtk T C 9: 85,602,801 (GRCm39) S735G probably benign Het
Itga4 A G 2: 79,109,490 (GRCm39) I230V probably null Het
Kcnh8 A T 17: 53,200,988 (GRCm39) Q474L probably damaging Het
Kcnh8 G T 17: 53,200,989 (GRCm39) Q474H probably damaging Het
Mib1 C T 18: 10,768,149 (GRCm39) T466I probably damaging Het
Or12d12 T A 17: 37,611,156 (GRCm39) R52S probably benign Het
Or2ad1 C T 13: 21,326,337 (GRCm39) V297I probably benign Het
Or2l5 A C 16: 19,334,375 (GRCm39) Y4D probably benign Het
Parp14 G A 16: 35,677,130 (GRCm39) A946V probably benign Het
Prdx6b A G 2: 80,123,520 (GRCm39) I110V probably benign Het
Prf1 A C 10: 61,139,428 (GRCm39) D462A probably benign Het
Rps6ka5 T C 12: 100,541,964 (GRCm39) D391G possibly damaging Het
Scn7a A T 2: 66,510,639 (GRCm39) N1254K probably damaging Het
Skor2 A T 18: 76,963,827 (GRCm39) K924* probably null Het
Slc22a21 A G 11: 53,870,598 (GRCm39) I29T probably benign Het
Tas2r140 T C 6: 133,032,171 (GRCm39) T196A probably benign Het
Thrap3 A G 4: 126,073,862 (GRCm39) S295P probably benign Het
Trim43a GATTTATTTATTTATTTATTTATTTATTTATTTATTTATT GATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT 9: 88,465,042 (GRCm39) probably benign Het
Ubtd2 C T 11: 32,466,125 (GRCm39) R115W probably damaging Het
Unc93b1 A G 19: 3,985,228 (GRCm39) E12G possibly damaging Het
Vgll3 T A 16: 65,636,459 (GRCm39) Y203* probably null Het
Vmn1r212 G A 13: 23,067,638 (GRCm39) Q232* probably null Het
Vmn2r107 T A 17: 20,576,947 (GRCm39) L315* probably null Het
Washc5 A G 15: 59,210,757 (GRCm39) probably benign Het
Other mutations in Vmn2r84
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01461:Vmn2r84 APN 10 130,227,094 (GRCm39) missense possibly damaging 0.65
IGL01590:Vmn2r84 APN 10 130,221,964 (GRCm39) missense probably damaging 1.00
IGL01639:Vmn2r84 APN 10 130,225,141 (GRCm39) nonsense probably null
IGL01843:Vmn2r84 APN 10 130,222,148 (GRCm39) missense probably benign
IGL01911:Vmn2r84 APN 10 130,222,277 (GRCm39) missense probably damaging 0.99
IGL01937:Vmn2r84 APN 10 130,221,755 (GRCm39) missense probably damaging 1.00
IGL01977:Vmn2r84 APN 10 130,229,935 (GRCm39) missense probably benign 0.11
IGL02177:Vmn2r84 APN 10 130,227,881 (GRCm39) missense probably benign 0.00
IGL02291:Vmn2r84 APN 10 130,226,617 (GRCm39) missense probably damaging 1.00
IGL02590:Vmn2r84 APN 10 130,227,356 (GRCm39) splice site probably benign
IGL02727:Vmn2r84 APN 10 130,229,995 (GRCm39) missense possibly damaging 0.95
IGL02900:Vmn2r84 APN 10 130,223,861 (GRCm39) splice site probably benign
IGL03383:Vmn2r84 APN 10 130,222,556 (GRCm39) missense probably damaging 1.00
PIT4378001:Vmn2r84 UTSW 10 130,221,784 (GRCm39) missense probably damaging 1.00
R0076:Vmn2r84 UTSW 10 130,230,062 (GRCm39) missense probably damaging 1.00
R0089:Vmn2r84 UTSW 10 130,222,588 (GRCm39) splice site probably benign
R0153:Vmn2r84 UTSW 10 130,227,877 (GRCm39) missense probably benign 0.06
R0611:Vmn2r84 UTSW 10 130,221,991 (GRCm39) missense probably damaging 1.00
R0883:Vmn2r84 UTSW 10 130,226,984 (GRCm39) missense probably damaging 0.99
R1295:Vmn2r84 UTSW 10 130,225,008 (GRCm39) missense probably benign 0.12
R1401:Vmn2r84 UTSW 10 130,227,859 (GRCm39) missense possibly damaging 0.89
R1521:Vmn2r84 UTSW 10 130,225,137 (GRCm39) missense probably benign 0.10
R1590:Vmn2r84 UTSW 10 130,227,349 (GRCm39) critical splice acceptor site probably null
R1710:Vmn2r84 UTSW 10 130,226,968 (GRCm39) missense probably benign 0.02
R1891:Vmn2r84 UTSW 10 130,221,938 (GRCm39) missense possibly damaging 0.78
R1956:Vmn2r84 UTSW 10 130,226,677 (GRCm39) missense probably benign 0.01
R1957:Vmn2r84 UTSW 10 130,226,677 (GRCm39) missense probably benign 0.01
R1962:Vmn2r84 UTSW 10 130,226,591 (GRCm39) missense probably damaging 0.99
R1994:Vmn2r84 UTSW 10 130,221,878 (GRCm39) missense probably damaging 1.00
R2124:Vmn2r84 UTSW 10 130,227,100 (GRCm39) missense probably damaging 0.99
R2409:Vmn2r84 UTSW 10 130,227,940 (GRCm39) missense probably damaging 0.99
R2474:Vmn2r84 UTSW 10 130,222,392 (GRCm39) missense possibly damaging 0.50
R2851:Vmn2r84 UTSW 10 130,230,036 (GRCm39) missense probably benign 0.05
R3508:Vmn2r84 UTSW 10 130,226,777 (GRCm39) missense probably damaging 1.00
R3792:Vmn2r84 UTSW 10 130,221,669 (GRCm39) makesense probably null
R4051:Vmn2r84 UTSW 10 130,226,767 (GRCm39) missense probably damaging 1.00
R4061:Vmn2r84 UTSW 10 130,221,898 (GRCm39) missense probably damaging 1.00
R4091:Vmn2r84 UTSW 10 130,227,238 (GRCm39) missense probably damaging 1.00
R4190:Vmn2r84 UTSW 10 130,227,163 (GRCm39) nonsense probably null
R4520:Vmn2r84 UTSW 10 130,222,391 (GRCm39) missense probably damaging 1.00
R4584:Vmn2r84 UTSW 10 130,226,582 (GRCm39) missense probably benign 0.00
R4588:Vmn2r84 UTSW 10 130,221,809 (GRCm39) missense probably damaging 0.98
R4655:Vmn2r84 UTSW 10 130,229,973 (GRCm39) nonsense probably null
R4860:Vmn2r84 UTSW 10 130,221,712 (GRCm39) missense probably damaging 0.99
R4860:Vmn2r84 UTSW 10 130,221,712 (GRCm39) missense probably damaging 0.99
R5022:Vmn2r84 UTSW 10 130,222,417 (GRCm39) missense probably damaging 1.00
R5146:Vmn2r84 UTSW 10 130,221,971 (GRCm39) missense probably damaging 1.00
R5237:Vmn2r84 UTSW 10 130,221,863 (GRCm39) missense probably damaging 0.99
R5695:Vmn2r84 UTSW 10 130,225,064 (GRCm39) missense probably benign 0.12
R5793:Vmn2r84 UTSW 10 130,221,754 (GRCm39) missense probably damaging 0.99
R6210:Vmn2r84 UTSW 10 130,222,114 (GRCm39) missense probably damaging 1.00
R6286:Vmn2r84 UTSW 10 130,226,737 (GRCm39) missense possibly damaging 0.65
R6580:Vmn2r84 UTSW 10 130,225,110 (GRCm39) missense possibly damaging 0.93
R6607:Vmn2r84 UTSW 10 130,226,731 (GRCm39) missense possibly damaging 0.87
R6818:Vmn2r84 UTSW 10 130,222,147 (GRCm39) missense probably benign 0.09
R6956:Vmn2r84 UTSW 10 130,225,136 (GRCm39) missense probably damaging 0.98
R6994:Vmn2r84 UTSW 10 130,226,876 (GRCm39) missense possibly damaging 0.90
R7075:Vmn2r84 UTSW 10 130,226,941 (GRCm39) missense probably damaging 0.99
R7225:Vmn2r84 UTSW 10 130,222,552 (GRCm39) missense probably damaging 0.99
R7252:Vmn2r84 UTSW 10 130,222,279 (GRCm39) missense probably damaging 1.00
R7263:Vmn2r84 UTSW 10 130,225,077 (GRCm39) missense probably damaging 1.00
R7297:Vmn2r84 UTSW 10 130,227,119 (GRCm39) missense probably benign 0.19
R7439:Vmn2r84 UTSW 10 130,227,982 (GRCm39) missense possibly damaging 0.90
R7441:Vmn2r84 UTSW 10 130,227,982 (GRCm39) missense possibly damaging 0.90
R7857:Vmn2r84 UTSW 10 130,226,738 (GRCm39) missense probably benign 0.00
R8263:Vmn2r84 UTSW 10 130,227,037 (GRCm39) missense probably damaging 1.00
R8555:Vmn2r84 UTSW 10 130,230,100 (GRCm39) missense probably benign 0.28
R8766:Vmn2r84 UTSW 10 130,222,241 (GRCm39) missense probably damaging 0.98
R8821:Vmn2r84 UTSW 10 130,226,968 (GRCm39) missense probably benign 0.02
R8831:Vmn2r84 UTSW 10 130,226,968 (GRCm39) missense probably benign 0.02
R8970:Vmn2r84 UTSW 10 130,222,244 (GRCm39) missense probably damaging 0.98
R9164:Vmn2r84 UTSW 10 130,221,669 (GRCm39) makesense probably null
R9190:Vmn2r84 UTSW 10 130,226,843 (GRCm39) missense probably benign 0.03
R9261:Vmn2r84 UTSW 10 130,229,976 (GRCm39) missense probably benign 0.00
R9310:Vmn2r84 UTSW 10 130,227,993 (GRCm39) missense possibly damaging 0.81
R9434:Vmn2r84 UTSW 10 130,221,745 (GRCm39) missense possibly damaging 0.65
R9613:Vmn2r84 UTSW 10 130,226,591 (GRCm39) missense probably damaging 0.99
Z1177:Vmn2r84 UTSW 10 130,227,771 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- TGTGAGAGAAATGCCTTGTTTGAGGAAG -3'
(R):5'- AATCATGAGAGAAACACTGATGCCACAT -3'

Sequencing Primer
(F):5'- AATGCCTTGTTTGAGGAAGATACTG -3'
(R):5'- ATTGCTACAACCCGAATGTTAC -3'
Posted On 2014-01-29