Incidental Mutation 'IGL01753:Zfp90'
| ID |
153160 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Zfp90
|
| Ensembl Gene |
ENSMUSG00000031907 |
| Gene Name |
zinc finger protein 90 |
| Synonyms |
Nk10 expressed protein, NK10, 6430515L01Rik, Zfp64, KRAB17, Zfp83 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.188)
|
| Stock # |
IGL01753
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
8 |
| Chromosomal Location |
107141959-107153230 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
C to T
at 107150782 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Threonine to Isoleucine
at position 165
(T165I)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000148744
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000034382]
[ENSMUST00000212606]
[ENSMUST00000212874]
[ENSMUST00000213045]
|
| AlphaFold |
Q61967 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000034382
AA Change: T165I
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
| SMART Domains |
Protein: ENSMUSP00000034382
Gene: ENSMUSG00000031907
AA Change: T165I
| Domain | Start | End | E-Value | Type |
|---|
|
KRAB
|
14 |
74 |
4.83e-40 |
SMART |
|
ZnF_C2H2
|
208 |
230 |
1.38e-3 |
SMART |
|
ZnF_C2H2
|
250 |
272 |
2.75e-3 |
SMART |
|
ZnF_C2H2
|
278 |
300 |
3.83e-2 |
SMART |
|
ZnF_C2H2
|
306 |
328 |
1.13e-4 |
SMART |
|
ZnF_C2H2
|
334 |
356 |
2.09e-3 |
SMART |
|
ZnF_C2H2
|
362 |
384 |
3.16e-3 |
SMART |
|
ZnF_C2H2
|
390 |
412 |
1.6e-4 |
SMART |
|
ZnF_C2H2
|
446 |
468 |
1.92e-2 |
SMART |
|
ZnF_C2H2
|
494 |
516 |
3.69e-4 |
SMART |
|
ZnF_C2H2
|
522 |
544 |
5.59e-4 |
SMART |
|
ZnF_C2H2
|
550 |
572 |
1.28e-3 |
SMART |
|
ZnF_C2H2
|
578 |
600 |
1.28e-3 |
SMART |
|
ZnF_C2H2
|
606 |
628 |
2.4e-3 |
SMART |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000180410
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000211958
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000212606
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000212866
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000212874
AA Change: T165I
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000213045
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the zinc finger protein family that modulates gene expression. The encoded protein derepresses the transcription of certain fetal cardiac genes and may contribute to the genetic reprogramming that occurs during the development of heart failure. Genome wide association studies have identified this gene among ulcerative colitis risk loci. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Mar 2015]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 31 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Adamts1 |
A |
G |
16: 85,599,112 (GRCm39) |
F163L |
probably benign |
Het |
| Ap2b1 |
A |
G |
11: 83,212,799 (GRCm39) |
T60A |
probably damaging |
Het |
| Casp3 |
A |
G |
8: 47,082,776 (GRCm39) |
|
probably benign |
Het |
| Ces1d |
T |
C |
8: 93,919,438 (GRCm39) |
Y118C |
probably damaging |
Het |
| Chuk |
T |
C |
19: 44,087,015 (GRCm39) |
|
probably benign |
Het |
| Clec4b2 |
A |
T |
6: 123,179,169 (GRCm39) |
Y157F |
possibly damaging |
Het |
| Crppa |
C |
T |
12: 36,523,176 (GRCm39) |
L202F |
probably damaging |
Het |
| Dlg4 |
T |
A |
11: 69,932,173 (GRCm39) |
F480I |
probably damaging |
Het |
| Dock8 |
T |
A |
19: 25,038,656 (GRCm39) |
|
probably benign |
Het |
| Dsg1b |
T |
C |
18: 20,530,906 (GRCm39) |
|
probably benign |
Het |
| Dstyk |
T |
C |
1: 132,390,677 (GRCm39) |
Y830H |
probably damaging |
Het |
| Hook2 |
T |
C |
8: 85,719,865 (GRCm39) |
|
probably null |
Het |
| Ighv2-9-1 |
T |
C |
12: 113,733,548 (GRCm39) |
D91G |
probably damaging |
Het |
| Igkv12-41 |
T |
C |
6: 69,835,510 (GRCm39) |
R81G |
probably damaging |
Het |
| Jmjd1c |
T |
A |
10: 67,067,794 (GRCm39) |
S1766T |
probably damaging |
Het |
| Mdn1 |
G |
A |
4: 32,708,483 (GRCm39) |
V1670I |
probably benign |
Het |
| Naa15 |
T |
C |
3: 51,350,274 (GRCm39) |
F124L |
probably damaging |
Het |
| Nek2 |
C |
T |
1: 191,557,598 (GRCm39) |
Q187* |
probably null |
Het |
| Or2n1 |
G |
T |
17: 38,486,577 (GRCm39) |
V201L |
probably benign |
Het |
| Or8b48 |
C |
T |
9: 38,492,809 (GRCm39) |
P79S |
probably damaging |
Het |
| Pif1 |
G |
A |
9: 65,500,590 (GRCm39) |
G505D |
probably damaging |
Het |
| Plxna4 |
T |
A |
6: 32,287,413 (GRCm39) |
I495F |
probably benign |
Het |
| Ppp1r21 |
T |
C |
17: 88,869,530 (GRCm39) |
|
probably benign |
Het |
| Prex1 |
T |
C |
2: 166,444,802 (GRCm39) |
I282V |
probably benign |
Het |
| Pzp |
A |
T |
6: 128,479,146 (GRCm39) |
I669N |
possibly damaging |
Het |
| Sipa1l2 |
T |
A |
8: 126,180,031 (GRCm39) |
|
probably benign |
Het |
| Top2a |
T |
A |
11: 98,898,100 (GRCm39) |
T689S |
probably damaging |
Het |
| Trerf1 |
T |
A |
17: 47,626,362 (GRCm39) |
|
noncoding transcript |
Het |
| Uso1 |
T |
C |
5: 92,300,777 (GRCm39) |
|
probably null |
Het |
| Vmn2r-ps158 |
T |
A |
7: 42,674,139 (GRCm39) |
V399E |
probably damaging |
Het |
| Zcchc7 |
A |
G |
4: 44,929,217 (GRCm39) |
I390V |
probably benign |
Het |
|
| Other mutations in Zfp90 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02170:Zfp90
|
APN |
8 |
107,146,156 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL02818:Zfp90
|
APN |
8 |
107,150,841 (GRCm39) |
missense |
probably benign |
|
|
R0378:Zfp90
|
UTSW |
8 |
107,152,138 (GRCm39) |
missense |
possibly damaging |
0.69 |
|
R0462:Zfp90
|
UTSW |
8 |
107,151,892 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R1555:Zfp90
|
UTSW |
8 |
107,150,727 (GRCm39) |
missense |
probably benign |
|
|
R1869:Zfp90
|
UTSW |
8 |
107,145,755 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1870:Zfp90
|
UTSW |
8 |
107,145,755 (GRCm39) |
missense |
probably benign |
0.00 |
|
R2110:Zfp90
|
UTSW |
8 |
107,152,120 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2112:Zfp90
|
UTSW |
8 |
107,152,120 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3717:Zfp90
|
UTSW |
8 |
107,150,682 (GRCm39) |
missense |
probably benign |
0.12 |
|
R4506:Zfp90
|
UTSW |
8 |
107,151,496 (GRCm39) |
missense |
possibly damaging |
0.78 |
|
R5288:Zfp90
|
UTSW |
8 |
107,152,000 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5691:Zfp90
|
UTSW |
8 |
107,151,710 (GRCm39) |
nonsense |
probably null |
|
|
R5789:Zfp90
|
UTSW |
8 |
107,150,605 (GRCm39) |
missense |
probably benign |
|
|
R6283:Zfp90
|
UTSW |
8 |
107,152,026 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6560:Zfp90
|
UTSW |
8 |
107,142,379 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R6977:Zfp90
|
UTSW |
8 |
107,151,949 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R6977:Zfp90
|
UTSW |
8 |
107,151,948 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7040:Zfp90
|
UTSW |
8 |
107,151,641 (GRCm39) |
nonsense |
probably null |
|
|
R7196:Zfp90
|
UTSW |
8 |
107,151,780 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7523:Zfp90
|
UTSW |
8 |
107,150,545 (GRCm39) |
missense |
probably benign |
0.07 |
|
R7535:Zfp90
|
UTSW |
8 |
107,150,900 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R7546:Zfp90
|
UTSW |
8 |
107,151,323 (GRCm39) |
missense |
probably benign |
0.22 |
|
R7719:Zfp90
|
UTSW |
8 |
107,145,725 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8036:Zfp90
|
UTSW |
8 |
107,145,760 (GRCm39) |
missense |
probably benign |
0.21 |
|
R8056:Zfp90
|
UTSW |
8 |
107,151,112 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9370:Zfp90
|
UTSW |
8 |
107,145,791 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9581:Zfp90
|
UTSW |
8 |
107,151,714 (GRCm39) |
missense |
probably benign |
0.07 |
|
| Posted On |
2014-02-04 |
Incidental Mutation