Incidental Mutation 'IGL00088:Vmn2r52'
ID 1536
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn2r52
Ensembl Gene ENSMUSG00000091930
Gene Name vomeronasal 2, receptor 52
Synonyms EG384534
Accession Numbers
Essential gene? Probably non essential (E-score: 0.080) question?
Stock # IGL00088
Quality Score
Status
Chromosome 7
Chromosomal Location 9892579-9910213 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) G to T at 9903023 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Histidine to Glutamine at position 468 (H468Q)
Ref Sequence ENSEMBL: ENSMUSP00000129352 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000164918]
AlphaFold L7N2B2
Predicted Effect probably benign
Transcript: ENSMUST00000164918
AA Change: H468Q

PolyPhen 2 Score 0.297 (Sensitivity: 0.91; Specificity: 0.89)
SMART Domains Protein: ENSMUSP00000129352
Gene: ENSMUSG00000091930
AA Change: H468Q

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:ANF_receptor 73 469 8.1e-29 PFAM
Pfam:NCD3G 512 565 1.5e-19 PFAM
Pfam:7tm_3 596 833 1.1e-55 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 63 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Ankhd1 A G 18: 36,798,512 (GRCm39) probably benign Het
Anpep A G 7: 79,475,484 (GRCm39) V879A possibly damaging Het
Asb13 T G 13: 3,693,476 (GRCm39) V78G probably null Het
Atad2b A G 12: 5,074,593 (GRCm39) R1051G probably damaging Het
Bdp1 T C 13: 100,235,018 (GRCm39) Y192C probably damaging Het
C1ql2 G T 1: 120,269,399 (GRCm39) G185C probably damaging Het
Catsperg2 A G 7: 29,404,829 (GRCm39) S745P possibly damaging Het
Col19a1 A T 1: 24,600,387 (GRCm39) S52T unknown Het
Col4a2 G T 8: 11,493,685 (GRCm39) G1418V probably damaging Het
Crnkl1 C T 2: 145,760,388 (GRCm39) D677N possibly damaging Het
Cyp2j8 T A 4: 96,392,079 (GRCm39) N125I probably benign Het
Cyp2t4 A T 7: 26,854,723 (GRCm39) M68L probably benign Het
Dclk2 T A 3: 86,706,397 (GRCm39) probably null Het
Dmxl2 T C 9: 54,308,988 (GRCm39) D1921G probably benign Het
Dnah10 G A 5: 124,905,667 (GRCm39) G4104S probably damaging Het
Echdc2 T C 4: 108,036,108 (GRCm39) I273T probably damaging Het
Extl1 T C 4: 134,085,330 (GRCm39) K596E probably damaging Het
Fads3 A T 19: 10,029,663 (GRCm39) D108V probably null Het
Fam135b A G 15: 71,322,343 (GRCm39) L1274P probably damaging Het
Fat1 T A 8: 45,477,639 (GRCm39) H2228Q possibly damaging Het
Gcc2 C T 10: 58,128,502 (GRCm39) H1341Y probably damaging Het
Gls2 A G 10: 128,036,840 (GRCm39) probably null Het
Gpr137 A C 19: 6,917,072 (GRCm39) V139G probably damaging Het
Ikbke A G 1: 131,197,749 (GRCm39) probably null Het
Irak2 A T 6: 113,655,636 (GRCm39) N285Y probably benign Het
Kcnu1 G A 8: 26,387,884 (GRCm39) C566Y probably benign Het
Klhl29 G A 12: 5,190,705 (GRCm39) P97S probably benign Het
Lama4 T C 10: 38,941,591 (GRCm39) probably benign Het
Lhx6 G A 2: 35,981,728 (GRCm39) probably benign Het
Mdn1 T C 4: 32,723,651 (GRCm39) L2529P probably damaging Het
Muc4 G A 16: 32,754,086 (GRCm38) G1321R probably benign Het
Naa15 T A 3: 51,345,826 (GRCm39) V19D probably damaging Het
Ncbp3 A T 11: 72,964,355 (GRCm39) probably benign Het
Nckipsd G A 9: 108,692,168 (GRCm39) V530I probably benign Het
Neb A G 2: 52,198,759 (GRCm39) I394T possibly damaging Het
Nnmt A T 9: 48,503,224 (GRCm39) probably benign Het
Nup58 T A 14: 60,480,026 (GRCm39) I207L probably benign Het
Or14j2 A T 17: 37,885,808 (GRCm39) C169S probably damaging Het
Or5ae1 T A 7: 84,565,578 (GRCm39) M197K probably damaging Het
Or5k16 C T 16: 58,736,213 (GRCm39) E264K probably benign Het
Otud4 T A 8: 80,399,510 (GRCm39) N741K probably damaging Het
Pard6a T A 8: 106,429,833 (GRCm39) C264S probably benign Het
Plch2 T C 4: 155,091,099 (GRCm39) N276S probably damaging Het
Pramel31 T A 4: 144,089,100 (GRCm39) H139Q possibly damaging Het
Pramel32 T A 4: 88,547,307 (GRCm39) K121N probably benign Het
Racgap1 T C 15: 99,534,003 (GRCm39) probably benign Het
Rad51d T C 11: 82,780,572 (GRCm39) D70G probably damaging Het
Recql4 C T 15: 76,591,536 (GRCm39) A484T possibly damaging Het
Reg3g A T 6: 78,443,762 (GRCm39) S149T probably benign Het
Rpl13a C A 7: 44,776,495 (GRCm39) probably null Het
Scn10a T C 9: 119,501,292 (GRCm39) Y164C probably damaging Het
Scn2a A G 2: 65,594,784 (GRCm39) I1878V probably benign Het
Sgcg T A 14: 61,477,796 (GRCm39) R98* probably null Het
Speer4c2 C A 5: 15,861,884 (GRCm39) probably benign Het
Tas2r140 A T 6: 40,468,274 (GRCm39) I35F probably benign Het
Tex19.2 A G 11: 121,007,638 (GRCm39) F270S possibly damaging Het
Traip C T 9: 107,847,749 (GRCm39) R391W probably benign Het
Trim7 A G 11: 48,736,398 (GRCm39) N251D probably damaging Het
Trmt2a T A 16: 18,067,351 (GRCm39) V8D probably benign Het
Tut7 T C 13: 59,964,512 (GRCm39) E221G probably damaging Het
Ubr3 A C 2: 69,819,154 (GRCm39) I9L probably benign Het
Usp42 A G 5: 143,702,897 (GRCm39) S575P probably benign Het
Vmn2r59 T A 7: 41,661,488 (GRCm39) T776S possibly damaging Het
Other mutations in Vmn2r52
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00328:Vmn2r52 APN 7 9,905,344 (GRCm39) missense probably benign 0.12
IGL00980:Vmn2r52 APN 7 9,905,017 (GRCm39) missense probably damaging 1.00
IGL01468:Vmn2r52 APN 7 9,892,868 (GRCm39) missense probably damaging 1.00
IGL01660:Vmn2r52 APN 7 9,893,107 (GRCm39) missense probably damaging 0.97
IGL02215:Vmn2r52 APN 7 9,905,029 (GRCm39) missense probably damaging 0.97
IGL03030:Vmn2r52 APN 7 9,892,799 (GRCm39) missense probably benign 0.12
IGL03212:Vmn2r52 APN 7 9,893,474 (GRCm39) missense possibly damaging 0.47
FR4589:Vmn2r52 UTSW 7 9,892,947 (GRCm39) missense probably damaging 0.97
PIT4283001:Vmn2r52 UTSW 7 9,904,756 (GRCm39) missense possibly damaging 0.89
R0184:Vmn2r52 UTSW 7 9,893,265 (GRCm39) missense probably damaging 1.00
R0190:Vmn2r52 UTSW 7 9,905,315 (GRCm39) missense probably benign 0.00
R0240:Vmn2r52 UTSW 7 9,893,327 (GRCm39) missense probably damaging 0.99
R0240:Vmn2r52 UTSW 7 9,893,327 (GRCm39) missense probably damaging 0.99
R0257:Vmn2r52 UTSW 7 9,904,982 (GRCm39) nonsense probably null
R0310:Vmn2r52 UTSW 7 9,893,393 (GRCm39) missense probably damaging 1.00
R1831:Vmn2r52 UTSW 7 9,893,415 (GRCm39) missense probably damaging 1.00
R1862:Vmn2r52 UTSW 7 9,907,333 (GRCm39) missense possibly damaging 0.94
R2484:Vmn2r52 UTSW 7 9,903,058 (GRCm39) missense probably damaging 0.96
R2510:Vmn2r52 UTSW 7 9,904,795 (GRCm39) missense probably benign
R3625:Vmn2r52 UTSW 7 9,893,105 (GRCm39) missense probably damaging 1.00
R3803:Vmn2r52 UTSW 7 9,907,439 (GRCm39) missense probably damaging 1.00
R4013:Vmn2r52 UTSW 7 9,904,603 (GRCm39) missense probably benign 0.00
R4283:Vmn2r52 UTSW 7 9,904,565 (GRCm39) missense possibly damaging 0.60
R4324:Vmn2r52 UTSW 7 9,904,940 (GRCm39) missense possibly damaging 0.94
R4578:Vmn2r52 UTSW 7 9,904,617 (GRCm39) missense probably damaging 1.00
R4806:Vmn2r52 UTSW 7 9,893,169 (GRCm39) missense probably damaging 1.00
R5083:Vmn2r52 UTSW 7 9,893,392 (GRCm39) nonsense probably null
R5249:Vmn2r52 UTSW 7 9,910,197 (GRCm39) missense probably benign
R5306:Vmn2r52 UTSW 7 9,904,672 (GRCm39) missense possibly damaging 0.88
R5332:Vmn2r52 UTSW 7 9,903,052 (GRCm39) missense probably benign 0.17
R5617:Vmn2r52 UTSW 7 9,904,861 (GRCm39) missense probably damaging 0.99
R5643:Vmn2r52 UTSW 7 9,905,059 (GRCm39) missense probably damaging 1.00
R5749:Vmn2r52 UTSW 7 9,892,959 (GRCm39) missense probably damaging 1.00
R5763:Vmn2r52 UTSW 7 9,905,231 (GRCm39) missense probably benign 0.01
R6103:Vmn2r52 UTSW 7 9,905,327 (GRCm39) missense probably benign 0.36
R6148:Vmn2r52 UTSW 7 9,905,090 (GRCm39) missense probably benign 0.00
R6356:Vmn2r52 UTSW 7 9,902,926 (GRCm39) missense probably benign 0.01
R6412:Vmn2r52 UTSW 7 9,904,936 (GRCm39) missense probably benign
R6657:Vmn2r52 UTSW 7 9,893,090 (GRCm39) missense probably damaging 0.99
R6997:Vmn2r52 UTSW 7 9,902,998 (GRCm39) missense probably benign 0.06
R7395:Vmn2r52 UTSW 7 9,904,744 (GRCm39) missense probably benign 0.00
R7621:Vmn2r52 UTSW 7 9,907,274 (GRCm39) missense probably benign 0.00
R7691:Vmn2r52 UTSW 7 9,893,109 (GRCm39) missense probably damaging 0.97
R7852:Vmn2r52 UTSW 7 9,892,895 (GRCm39) missense probably damaging 1.00
R7908:Vmn2r52 UTSW 7 9,896,877 (GRCm39) missense probably benign
R7909:Vmn2r52 UTSW 7 9,896,877 (GRCm39) missense probably benign
R7912:Vmn2r52 UTSW 7 9,896,877 (GRCm39) missense probably benign
R7913:Vmn2r52 UTSW 7 9,896,877 (GRCm39) missense probably benign
R7938:Vmn2r52 UTSW 7 9,893,300 (GRCm39) missense probably benign 0.12
R8884:Vmn2r52 UTSW 7 9,892,734 (GRCm39) missense probably damaging 1.00
R9003:Vmn2r52 UTSW 7 9,905,181 (GRCm39) missense probably benign 0.07
R9140:Vmn2r52 UTSW 7 9,892,643 (GRCm39) missense probably damaging 0.99
R9141:Vmn2r52 UTSW 7 9,905,331 (GRCm39) nonsense probably null
R9500:Vmn2r52 UTSW 7 9,905,281 (GRCm39) missense probably damaging 1.00
R9562:Vmn2r52 UTSW 7 9,893,476 (GRCm39) missense probably benign 0.22
R9564:Vmn2r52 UTSW 7 9,905,182 (GRCm39) missense probably benign 0.15
R9565:Vmn2r52 UTSW 7 9,893,476 (GRCm39) missense probably benign 0.22
R9597:Vmn2r52 UTSW 7 9,904,719 (GRCm39) nonsense probably null
R9743:Vmn2r52 UTSW 7 9,904,606 (GRCm39) missense possibly damaging 0.81
Z1176:Vmn2r52 UTSW 7 9,905,127 (GRCm39) missense probably damaging 0.97
Z1177:Vmn2r52 UTSW 7 9,903,117 (GRCm39) missense possibly damaging 0.93
Posted On 2011-07-12