Mutagenetix > Incidental Mutations

Incidental Mutation 'IGL01778:Gldn'

153772

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Gldn

Ensembl Gene

ENSMUSG00000046167

Gene Name

gliomedin

Synonyms

CRG-L2, Crlg2

Accession Numbers

Is this an essential gene?

Possibly non essential (E-score: 0.255) question?

Stock #

IGL01778

Quality Score

Status

Chromosome

Chromosomal Location

54286486-54341786 bp(+) (GRCm38)

Type of Mutation

splice site (3 bp from exon)

DNA Base Change (assembly)

A to T at 54334492 bp

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000056080 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000056740]

Predicted Effect

probably null
Transcript: ENSMUST00000056740

SMART Domains

Protein: ENSMUSP00000056080
Gene: ENSMUSG00000046167

Domain	Start	End	E-Value	Type
transmembrane domain	13	35	N/A	INTRINSIC
Pfam:Collagen	136	195	8.3e-11	PFAM
low complexity region	199	211	N/A	INTRINSIC
low complexity region	213	221	N/A	INTRINSIC
low complexity region	236	261	N/A	INTRINSIC
OLF	299	543	1.97e-35	SMART

Coding Region Coverage

Validation Efficiency

MGI Phenotype

PHENOTYPE: Mice homozygous for a knock-out allele fail to form heminodes without overt neurological abnormalities or alteration in nerve conduction. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 38 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Actrt2	T	C	4: 154,666,705	K325E	probably benign	Het
Arc	C	T	15: 74,672,355	M6I	probably benign	Het
Atp7b	A	T	8: 21,994,828	D1404E	probably benign	Het
BC030867	T	C	11: 102,255,596	C233R	probably benign	Het
Cdk5rap1	T	A	2: 154,366,036	N156I	probably damaging	Het
Ctsa	T	C	2: 164,834,310		probably benign	Het
Depdc1b	T	G	13: 108,362,327	N181K	probably benign	Het
Epg5	T	C	18: 78,019,274	V1994A	probably damaging	Het
Epyc	T	A	10: 97,681,237	C312*	probably null	Het
Erv3	T	A	2: 131,855,957	R161*	probably null	Het
Fhdc1	G	A	3: 84,444,735	A1061V	possibly damaging	Het
Gfra3	T	C	18: 34,691,591	T280A	possibly damaging	Het
Gm6768	T	C	12: 119,262,496		noncoding transcript	Het
Gtf3c4	G	A	2: 28,835,088	R211C	probably damaging	Het
Hsh2d	A	G	8: 72,193,507	D16G	probably damaging	Het
Klk15	T	A	7: 43,938,838	M190K	probably damaging	Het
Klri1	A	G	6: 129,717,047	S26P	possibly damaging	Het
Krt78	T	A	15: 101,950,967	D265V	probably damaging	Het
Lgr5	A	C	10: 115,462,702	I355S	probably damaging	Het
Lig3	T	A	11: 82,794,541	V595D	probably damaging	Het
Map2k6	A	C	11: 110,512,869		probably benign	Het
Mdm4	A	G	1: 132,994,547	S286P	probably benign	Het
Olfr320	A	G	11: 58,684,269	Y132C	probably damaging	Het
Pofut1	T	A	2: 153,248,528	M114K	probably damaging	Het
Rdh13	C	T	7: 4,430,389		probably null	Het
Reg3g	T	A	6: 78,466,833	I131F	probably benign	Het
Slc26a4	C	T	12: 31,528,854		probably benign	Het
Slc8a2	T	A	7: 16,158,893	F827I	probably damaging	Het
Slfn9	A	T	11: 82,987,374	C310S	probably damaging	Het
Sypl	A	G	12: 32,975,642	Y235C	probably damaging	Het
Trav7-4	A	T	14: 53,461,641	T82S	possibly damaging	Het
Trim28	T	A	7: 13,030,702	V782D	probably damaging	Het
Ttn	G	A	2: 76,744,898	T25217M	probably damaging	Het
Usp6nl	A	G	2: 6,427,570	T260A	possibly damaging	Het
Vmn2r54	A	T	7: 12,632,082	N308K	probably benign	Het
Xdh	T	C	17: 73,900,280	E986G	probably benign	Het
Zfp770	T	C	2: 114,196,238	D450G	probably damaging	Het
Zw10	T	G	9: 49,069,615	S438R	probably benign	Het

Other mutations in Gldn

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00585:Gldn	APN	9	54338464	missense	probably damaging	0.99
IGL02425:Gldn	APN	9	54338721	missense	probably damaging	1.00
R2284:Gldn	UTSW	9	54286565	nonsense	probably null
R2902:Gldn	UTSW	9	54335814	missense	possibly damaging	0.84
R3055:Gldn	UTSW	9	54338523	missense	probably damaging	0.96
R3683:Gldn	UTSW	9	54338340	missense	possibly damaging	0.58
R3684:Gldn	UTSW	9	54338340	missense	possibly damaging	0.58
R3732:Gldn	UTSW	9	54338662	missense	possibly damaging	0.76
R3732:Gldn	UTSW	9	54338662	missense	possibly damaging	0.76
R3733:Gldn	UTSW	9	54338662	missense	possibly damaging	0.76
R3734:Gldn	UTSW	9	54338662	missense	possibly damaging	0.76
R4668:Gldn	UTSW	9	54332018	nonsense	probably null
R5228:Gldn	UTSW	9	54334719	missense	probably damaging	0.98
R5574:Gldn	UTSW	9	54312922	missense	probably damaging	1.00
R5773:Gldn	UTSW	9	54334491	critical splice donor site	probably null
R5926:Gldn	UTSW	9	54338438	missense	possibly damaging	0.68
R5943:Gldn	UTSW	9	54338437	missense	possibly damaging	0.81
R6331:Gldn	UTSW	9	54286878	missense	probably benign	0.32
R6671:Gldn	UTSW	9	54338407	missense	probably damaging	1.00
R6821:Gldn	UTSW	9	54338770	missense	probably benign	0.01
R6897:Gldn	UTSW	9	54334874	splice site	probably null
R7579:Gldn	UTSW	9	54338364	missense	probably benign	0.21
R7604:Gldn	UTSW	9	54338593	missense	probably benign
R7705:Gldn	UTSW	9	54338692	missense	probably benign	0.00
Z1177:Gldn	UTSW	9	54286660	missense	probably benign	0.37

Posted On

2014-02-04