Incidental Mutation 'IGL01790:Or4c100'
| ID |
155187 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or4c100
|
| Ensembl Gene |
ENSMUSG00000082882 |
| Gene Name |
olfactory receptor family 4 subfamily C member 100 |
| Synonyms |
GA_x6K02T2Q125-50012960-50013871, Olfr1186, MOR230-5 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.057)
|
| Stock # |
IGL01790
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
2 |
| Chromosomal Location |
88355845-88356934 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to G
at 88356767 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Asparagine to Serine
at position 280
(N280S)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000151114
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000075025]
[ENSMUST00000121619]
[ENSMUST00000215912]
[ENSMUST00000216978]
|
| AlphaFold |
Q7TR16 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000075025
AA Change: N280S
PolyPhen 2
Score 0.989 (Sensitivity: 0.72; Specificity: 0.97)
|
| SMART Domains |
Protein: ENSMUSP00000074542
Gene: ENSMUSG00000057735
AA Change: N280S
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
28 |
302 |
2.5e-51 |
PFAM |
|
Pfam:7tm_1
|
38 |
284 |
4.8e-19 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000121619
AA Change: N280S
PolyPhen 2
Score 0.989 (Sensitivity: 0.72; Specificity: 0.97)
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000215912
AA Change: N280S
PolyPhen 2
Score 0.989 (Sensitivity: 0.72; Specificity: 0.97)
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000216978
AA Change: N280S
PolyPhen 2
Score 0.989 (Sensitivity: 0.72; Specificity: 0.97)
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 34 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Astn1 |
T |
C |
1: 158,407,897 (GRCm39) |
I618T |
possibly damaging |
Het |
| Bod1l |
T |
C |
5: 41,989,593 (GRCm39) |
S377G |
probably benign |
Het |
| Disp2 |
A |
T |
2: 118,621,361 (GRCm39) |
S698C |
probably damaging |
Het |
| Ehbp1l1 |
A |
G |
19: 5,773,012 (GRCm39) |
V43A |
probably damaging |
Het |
| Eml5 |
G |
T |
12: 98,765,191 (GRCm39) |
T1539K |
probably damaging |
Het |
| Fmnl2 |
T |
C |
2: 53,008,380 (GRCm39) |
I824T |
probably damaging |
Het |
| Gpr75 |
T |
G |
11: 30,841,132 (GRCm39) |
N12K |
probably damaging |
Het |
| Hap1 |
C |
T |
11: 100,242,732 (GRCm39) |
|
probably null |
Het |
| Helz2 |
A |
C |
2: 180,880,274 (GRCm39) |
Y481D |
probably benign |
Het |
| Klhl3 |
T |
C |
13: 58,157,236 (GRCm39) |
|
probably null |
Het |
| Lrcol1 |
A |
G |
5: 110,502,073 (GRCm39) |
S49G |
probably damaging |
Het |
| Magi3 |
A |
G |
3: 103,992,560 (GRCm39) |
M304T |
probably damaging |
Het |
| Med13l |
T |
C |
5: 118,731,587 (GRCm39) |
W88R |
probably damaging |
Het |
| Nfatc1 |
A |
G |
18: 80,710,257 (GRCm39) |
V503A |
probably damaging |
Het |
| Ntm |
C |
A |
9: 29,322,886 (GRCm39) |
V45L |
probably benign |
Het |
| Or4f60 |
T |
A |
2: 111,902,266 (GRCm39) |
I221L |
probably benign |
Het |
| Or4p22 |
T |
A |
2: 88,317,270 (GRCm39) |
S65T |
possibly damaging |
Het |
| Or5b116 |
A |
G |
19: 13,422,526 (GRCm39) |
D50G |
probably damaging |
Het |
| Or7a40 |
T |
C |
16: 16,490,967 (GRCm39) |
R293G |
probably damaging |
Het |
| Pias4 |
T |
C |
10: 80,993,332 (GRCm39) |
Q197R |
probably damaging |
Het |
| Pkhd1 |
T |
A |
1: 20,628,895 (GRCm39) |
H684L |
probably damaging |
Het |
| Prr5 |
A |
C |
15: 84,651,415 (GRCm39) |
I288L |
possibly damaging |
Het |
| Psmb3 |
T |
A |
11: 97,603,336 (GRCm39) |
M183K |
probably damaging |
Het |
| Rasal1 |
T |
C |
5: 120,808,383 (GRCm39) |
F472L |
possibly damaging |
Het |
| Rpl3 |
A |
T |
15: 79,964,061 (GRCm39) |
|
probably benign |
Het |
| Scin |
A |
T |
12: 40,113,256 (GRCm39) |
D538E |
probably benign |
Het |
| Sdhb |
T |
C |
4: 140,701,038 (GRCm39) |
S165P |
probably benign |
Het |
| Slc43a2 |
C |
A |
11: 75,436,577 (GRCm39) |
|
probably null |
Het |
| Sparc |
C |
T |
11: 55,298,041 (GRCm39) |
|
probably null |
Het |
| Speer4c2 |
C |
A |
5: 15,861,884 (GRCm39) |
|
probably benign |
Het |
| Tcf25 |
A |
G |
8: 124,119,975 (GRCm39) |
E382G |
possibly damaging |
Het |
| Tmx3 |
G |
A |
18: 90,529,458 (GRCm39) |
|
probably null |
Het |
| Trim24 |
C |
T |
6: 37,922,548 (GRCm39) |
P452S |
probably benign |
Het |
| Vsig10 |
T |
A |
5: 117,476,379 (GRCm39) |
W278R |
probably damaging |
Het |
|
| Other mutations in Or4c100 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01311:Or4c100
|
APN |
2 |
88,356,104 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
IGL01727:Or4c100
|
APN |
2 |
88,356,271 (GRCm39) |
missense |
probably benign |
0.03 |
|
IGL01868:Or4c100
|
APN |
2 |
88,356,059 (GRCm39) |
missense |
possibly damaging |
0.66 |
|
IGL03146:Or4c100
|
APN |
2 |
88,356,488 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
IGL03378:Or4c100
|
APN |
2 |
88,356,498 (GRCm39) |
nonsense |
probably null |
|
|
R0053:Or4c100
|
UTSW |
2 |
88,356,507 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0829:Or4c100
|
UTSW |
2 |
88,356,572 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1210:Or4c100
|
UTSW |
2 |
88,356,620 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R1754:Or4c100
|
UTSW |
2 |
88,356,159 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R2260:Or4c100
|
UTSW |
2 |
88,356,730 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R3426:Or4c100
|
UTSW |
2 |
88,356,208 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3781:Or4c100
|
UTSW |
2 |
88,356,709 (GRCm39) |
missense |
probably benign |
0.23 |
|
R4737:Or4c100
|
UTSW |
2 |
88,356,569 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4908:Or4c100
|
UTSW |
2 |
88,356,254 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4932:Or4c100
|
UTSW |
2 |
88,356,079 (GRCm39) |
missense |
probably benign |
0.02 |
|
R5071:Or4c100
|
UTSW |
2 |
88,356,385 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5831:Or4c100
|
UTSW |
2 |
88,356,824 (GRCm39) |
nonsense |
probably null |
|
|
R6222:Or4c100
|
UTSW |
2 |
88,329,614 (GRCm39) |
missense |
probably benign |
0.34 |
|
R6370:Or4c100
|
UTSW |
2 |
88,329,712 (GRCm39) |
nonsense |
probably null |
|
|
R6802:Or4c100
|
UTSW |
2 |
88,355,941 (GRCm39) |
missense |
probably benign |
0.02 |
|
R6931:Or4c100
|
UTSW |
2 |
88,356,538 (GRCm39) |
missense |
possibly damaging |
0.50 |
|
R7044:Or4c100
|
UTSW |
2 |
88,356,830 (GRCm39) |
missense |
probably benign |
|
|
R7121:Or4c100
|
UTSW |
2 |
88,356,170 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7166:Or4c100
|
UTSW |
2 |
88,355,990 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R7387:Or4c100
|
UTSW |
2 |
88,356,744 (GRCm39) |
nonsense |
probably null |
|
|
R7891:Or4c100
|
UTSW |
2 |
88,356,289 (GRCm39) |
missense |
probably benign |
0.04 |
|
R7951:Or4c100
|
UTSW |
2 |
88,356,148 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R7978:Or4c100
|
UTSW |
2 |
88,356,014 (GRCm39) |
nonsense |
probably null |
|
|
R8016:Or4c100
|
UTSW |
2 |
88,356,517 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8039:Or4c100
|
UTSW |
2 |
88,356,215 (GRCm39) |
missense |
probably benign |
0.07 |
|
R8389:Or4c100
|
UTSW |
2 |
88,355,931 (GRCm39) |
start codon destroyed |
probably null |
|
|
R9211:Or4c100
|
UTSW |
2 |
88,356,170 (GRCm39) |
missense |
probably benign |
0.08 |
|
R9279:Or4c100
|
UTSW |
2 |
88,356,211 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9691:Or4c100
|
UTSW |
2 |
88,356,421 (GRCm39) |
missense |
probably benign |
0.39 |
|
R9782:Or4c100
|
UTSW |
2 |
88,356,835 (GRCm39) |
missense |
probably benign |
0.01 |
|
| Posted On |
2014-02-04 |
Incidental Mutation