Incidental Mutation 'IGL01795:Nom1'
ID155321
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Nom1
Ensembl Gene ENSMUSG00000001569
Gene Namenucleolar protein with MIF4G domain 1
SynonymsGm1040, LOC381627, D5Kng1
Accession Numbers
Is this an essential gene? Essential (E-score: 1.000) question?
Stock #IGL01795
Quality Score
Status
Chromosome5
Chromosomal Location29434664-29457843 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to G at 29446871 bp
ZygosityHeterozygous
Amino Acid Change Threonine to Alanine at position 736 (T736A)
Ref Sequence ENSEMBL: ENSMUSP00000001611 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000001611]
Predicted Effect probably benign
Transcript: ENSMUST00000001611
AA Change: T736A

PolyPhen 2 Score 0.056 (Sensitivity: 0.94; Specificity: 0.84)
SMART Domains Protein: ENSMUSP00000001611
Gene: ENSMUSG00000001569
AA Change: T736A

DomainStartEndE-ValueType
low complexity region 79 98 N/A INTRINSIC
low complexity region 102 114 N/A INTRINSIC
low complexity region 119 147 N/A INTRINSIC
coiled coil region 170 197 N/A INTRINSIC
low complexity region 227 250 N/A INTRINSIC
low complexity region 311 326 N/A INTRINSIC
MIF4G 356 553 1.1e-21 SMART
MA3 649 755 1.59e-22 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000146347
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Proteins that contain MIF4G (middle of eIF4G (MIM 600495)) and/or MA3 domains, such as NOM1, function in protein translation. These domains include binding sites for members of the EIF4A family of ATP-dependent DEAD box RNA helicases (see EIF4A1; MIM 602641) (Simmons et al., 2005 [PubMed 15715967]).[supplied by OMIM, Mar 2008]
Allele List at MGI
Other mutations in this stock
Total: 28 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930451G09Rik T G 16: 4,974,071 noncoding transcript Het
4930572O03Rik C A 5: 15,656,886 probably benign Het
4930590J08Rik C T 6: 91,918,112 R263* probably null Het
Arfgef1 A T 1: 10,147,528 I1562K probably benign Het
B4galt1 T A 4: 40,807,760 D347V probably damaging Het
Ccdc178 T A 18: 22,019,118 R646S probably benign Het
Ccr1 A T 9: 123,964,112 L127* probably null Het
Cd109 A G 9: 78,661,765 probably benign Het
Chd6 A G 2: 160,961,374 V2128A probably benign Het
Chil6 T A 3: 106,388,792 I376F probably damaging Het
Chit1 T C 1: 134,148,429 S275P probably damaging Het
Erap1 T A 13: 74,666,090 probably null Het
F5 T C 1: 164,194,390 V1478A probably benign Het
Fras1 G T 5: 96,778,045 V3703F probably damaging Het
Hmmr C T 11: 40,721,734 M185I probably benign Het
Kcnu1 A G 8: 25,913,705 Y8C probably damaging Het
Krt16 A G 11: 100,247,724 probably benign Het
Mcf2l A G 8: 13,000,749 probably null Het
Mgat5 C T 1: 127,469,231 R572W probably damaging Het
Neil2 T C 14: 63,188,750 D57G probably benign Het
Olfr1030 T A 2: 85,984,134 I98N probably damaging Het
Olfr1301 A T 2: 111,754,386 M46L probably benign Het
Olfr414 A T 1: 174,430,649 I74F possibly damaging Het
Prr14l A T 5: 32,831,845 probably benign Het
Sall1 A G 8: 89,028,680 S1224P probably benign Het
Slc44a2 A C 9: 21,345,349 K336Q probably damaging Het
Sptan1 C T 2: 30,018,489 T1754I probably benign Het
Zdhhc5 T C 2: 84,690,046 S596G probably benign Het
Other mutations in Nom1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01475:Nom1 APN 5 29446274 missense possibly damaging 0.74
IGL02308:Nom1 APN 5 29437710 missense probably damaging 1.00
IGL02378:Nom1 APN 5 29451126 nonsense probably null
IGL02506:Nom1 APN 5 29439816 splice site probably benign
R0633:Nom1 UTSW 5 29451100 missense probably damaging 1.00
R0652:Nom1 UTSW 5 29435311 missense probably damaging 1.00
R1571:Nom1 UTSW 5 29442635 nonsense probably null
R1707:Nom1 UTSW 5 29435318 missense probably damaging 0.99
R1852:Nom1 UTSW 5 29446878 missense possibly damaging 0.46
R2025:Nom1 UTSW 5 29446851 missense probably damaging 1.00
R2196:Nom1 UTSW 5 29436021 missense probably benign 0.00
R2207:Nom1 UTSW 5 29439974 missense probably damaging 1.00
R2256:Nom1 UTSW 5 29437752 missense probably damaging 1.00
R2257:Nom1 UTSW 5 29437752 missense probably damaging 1.00
R2680:Nom1 UTSW 5 29443417 missense probably damaging 1.00
R3439:Nom1 UTSW 5 29435617 missense probably benign 0.01
R4291:Nom1 UTSW 5 29446372 critical splice donor site probably null
R4587:Nom1 UTSW 5 29451165 missense possibly damaging 0.91
R5374:Nom1 UTSW 5 29441379 missense probably damaging 1.00
R5761:Nom1 UTSW 5 29437641 missense probably damaging 1.00
R5772:Nom1 UTSW 5 29446875 missense possibly damaging 0.81
R5828:Nom1 UTSW 5 29435126 missense possibly damaging 0.53
R5963:Nom1 UTSW 5 29437770 missense probably damaging 1.00
R6208:Nom1 UTSW 5 29449619 missense possibly damaging 0.83
R7234:Nom1 UTSW 5 29435453 missense probably benign 0.01
R7476:Nom1 UTSW 5 29442536 missense probably benign 0.29
Posted On2014-02-04