Incidental Mutation 'IGL01808:Vmn1r203'
ID |
155726 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Vmn1r203
|
Ensembl Gene |
ENSMUSG00000069289 |
Gene Name |
vomeronasal 1 receptor 203 |
Synonyms |
V1rh11 |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.080)
|
Stock # |
IGL01808
|
Quality Score |
|
Status
|
|
Chromosome |
13 |
Chromosomal Location |
22708221-22709156 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 22708717 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Isoleucine to Threonine
at position 166
(I166T)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000154399
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000091729]
[ENSMUST00000227520]
[ENSMUST00000228889]
|
AlphaFold |
Q8R273 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000091729
AA Change: I166T
PolyPhen 2
Score 0.021 (Sensitivity: 0.95; Specificity: 0.80)
|
SMART Domains |
Protein: ENSMUSP00000089322 Gene: ENSMUSG00000069289 AA Change: I166T
Domain | Start | End | E-Value | Type |
transmembrane domain
|
19 |
41 |
N/A |
INTRINSIC |
Pfam:V1R
|
43 |
304 |
5.8e-35 |
PFAM |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000137651
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000227520
AA Change: I166T
PolyPhen 2
Score 0.021 (Sensitivity: 0.95; Specificity: 0.80)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000228889
AA Change: I166T
PolyPhen 2
Score 0.021 (Sensitivity: 0.95; Specificity: 0.80)
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 24 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Ager |
A |
T |
17: 34,818,431 (GRCm39) |
Q266L |
probably damaging |
Het |
Amz1 |
A |
G |
5: 140,727,034 (GRCm39) |
|
probably benign |
Het |
Ebf2 |
C |
T |
14: 67,651,932 (GRCm39) |
A488V |
probably benign |
Het |
Gm5885 |
A |
T |
6: 133,508,181 (GRCm39) |
|
noncoding transcript |
Het |
Gnas |
T |
C |
2: 174,140,490 (GRCm39) |
S220P |
probably damaging |
Het |
Gpr171 |
G |
A |
3: 59,005,572 (GRCm39) |
P68S |
probably damaging |
Het |
H2ax |
T |
C |
9: 44,246,246 (GRCm39) |
I63T |
possibly damaging |
Het |
H2-M9 |
A |
T |
17: 36,952,711 (GRCm39) |
|
probably null |
Het |
Igsf9 |
T |
C |
1: 172,312,370 (GRCm39) |
V27A |
probably benign |
Het |
Kcnh6 |
G |
T |
11: 105,914,753 (GRCm39) |
|
probably benign |
Het |
Mapkbp1 |
A |
G |
2: 119,853,650 (GRCm39) |
|
probably null |
Het |
Mllt6 |
C |
A |
11: 97,563,310 (GRCm39) |
H298N |
possibly damaging |
Het |
Mtmr3 |
A |
G |
11: 4,447,404 (GRCm39) |
I352T |
probably damaging |
Het |
Mtrr |
T |
C |
13: 68,714,212 (GRCm39) |
D509G |
probably benign |
Het |
Ncan |
C |
T |
8: 70,560,090 (GRCm39) |
|
probably null |
Het |
Or51aa2 |
T |
A |
7: 103,187,781 (GRCm39) |
Y220F |
probably damaging |
Het |
Pcdhb4 |
T |
C |
18: 37,442,067 (GRCm39) |
V459A |
probably damaging |
Het |
Phrf1 |
C |
A |
7: 140,840,879 (GRCm39) |
P1274Q |
probably damaging |
Het |
Slc4a2 |
T |
C |
5: 24,645,205 (GRCm39) |
L1125P |
probably damaging |
Het |
Synpo |
T |
C |
18: 60,735,280 (GRCm39) |
I650V |
probably benign |
Het |
Tsc1 |
G |
A |
2: 28,552,519 (GRCm39) |
R86H |
probably damaging |
Het |
Ugt2a3 |
A |
G |
5: 87,473,414 (GRCm39) |
V501A |
probably benign |
Het |
Vps13a |
A |
G |
19: 16,687,650 (GRCm39) |
C933R |
probably damaging |
Het |
Zfp142 |
A |
T |
1: 74,615,184 (GRCm39) |
F342Y |
probably damaging |
Het |
|
Other mutations in Vmn1r203 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01356:Vmn1r203
|
APN |
13 |
22,708,947 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01527:Vmn1r203
|
APN |
13 |
22,708,447 (GRCm39) |
missense |
possibly damaging |
0.89 |
IGL01887:Vmn1r203
|
APN |
13 |
22,709,046 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02340:Vmn1r203
|
APN |
13 |
22,708,997 (GRCm39) |
nonsense |
probably null |
|
IGL02543:Vmn1r203
|
APN |
13 |
22,709,074 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02684:Vmn1r203
|
APN |
13 |
22,708,539 (GRCm39) |
missense |
possibly damaging |
0.95 |
BB005:Vmn1r203
|
UTSW |
13 |
22,708,705 (GRCm39) |
missense |
probably benign |
0.01 |
BB015:Vmn1r203
|
UTSW |
13 |
22,708,705 (GRCm39) |
missense |
probably benign |
0.01 |
PIT4519001:Vmn1r203
|
UTSW |
13 |
22,708,765 (GRCm39) |
missense |
probably benign |
0.01 |
R0544:Vmn1r203
|
UTSW |
13 |
22,708,443 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1365:Vmn1r203
|
UTSW |
13 |
22,708,756 (GRCm39) |
missense |
probably benign |
0.00 |
R1396:Vmn1r203
|
UTSW |
13 |
22,708,678 (GRCm39) |
missense |
probably benign |
0.01 |
R1794:Vmn1r203
|
UTSW |
13 |
22,708,521 (GRCm39) |
missense |
probably damaging |
1.00 |
R2010:Vmn1r203
|
UTSW |
13 |
22,708,617 (GRCm39) |
missense |
possibly damaging |
0.56 |
R2169:Vmn1r203
|
UTSW |
13 |
22,708,905 (GRCm39) |
nonsense |
probably null |
|
R2333:Vmn1r203
|
UTSW |
13 |
22,709,113 (GRCm39) |
missense |
probably damaging |
1.00 |
R2418:Vmn1r203
|
UTSW |
13 |
22,709,004 (GRCm39) |
missense |
possibly damaging |
0.57 |
R2419:Vmn1r203
|
UTSW |
13 |
22,709,004 (GRCm39) |
missense |
possibly damaging |
0.57 |
R4322:Vmn1r203
|
UTSW |
13 |
22,708,408 (GRCm39) |
missense |
probably damaging |
1.00 |
R4460:Vmn1r203
|
UTSW |
13 |
22,708,852 (GRCm39) |
missense |
probably damaging |
0.98 |
R4686:Vmn1r203
|
UTSW |
13 |
22,708,528 (GRCm39) |
missense |
probably damaging |
1.00 |
R5526:Vmn1r203
|
UTSW |
13 |
22,708,273 (GRCm39) |
missense |
probably benign |
0.01 |
R6240:Vmn1r203
|
UTSW |
13 |
22,708,899 (GRCm39) |
missense |
possibly damaging |
0.89 |
R6607:Vmn1r203
|
UTSW |
13 |
22,708,891 (GRCm39) |
missense |
probably benign |
0.23 |
R7575:Vmn1r203
|
UTSW |
13 |
22,708,588 (GRCm39) |
missense |
probably benign |
0.12 |
R7928:Vmn1r203
|
UTSW |
13 |
22,708,705 (GRCm39) |
missense |
probably benign |
0.01 |
R8375:Vmn1r203
|
UTSW |
13 |
22,709,154 (GRCm39) |
makesense |
probably null |
|
R8421:Vmn1r203
|
UTSW |
13 |
22,709,154 (GRCm39) |
makesense |
probably null |
|
R8424:Vmn1r203
|
UTSW |
13 |
22,709,004 (GRCm39) |
missense |
probably damaging |
1.00 |
R8845:Vmn1r203
|
UTSW |
13 |
22,708,720 (GRCm39) |
missense |
possibly damaging |
0.81 |
R8933:Vmn1r203
|
UTSW |
13 |
22,708,691 (GRCm39) |
missense |
possibly damaging |
0.69 |
R8956:Vmn1r203
|
UTSW |
13 |
22,709,004 (GRCm39) |
missense |
possibly damaging |
0.57 |
R9493:Vmn1r203
|
UTSW |
13 |
22,708,423 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1177:Vmn1r203
|
UTSW |
13 |
22,708,579 (GRCm39) |
missense |
probably damaging |
0.97 |
|
Posted On |
2014-02-04 |