Incidental Mutation 'R0036:Eln'
ID |
15645 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Eln
|
Ensembl Gene |
ENSMUSG00000029675 |
Gene Name |
elastin |
Synonyms |
E030024M20Rik, tropoelastin |
MMRRC Submission |
038330-MU
|
Accession Numbers |
|
Essential gene? |
Essential
(E-score: 1.000)
|
Stock # |
R0036 (G1)
|
Quality Score |
|
Status
|
Validated
|
Chromosome |
5 |
Chromosomal Location |
134731447-134776177 bp(-) (GRCm39) |
Type of Mutation |
critical splice donor site (2 bp from exon) |
DNA Base Change (assembly) |
A to G
at 134739914 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000015138
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000015138]
[ENSMUST00000201856]
|
AlphaFold |
P54320 |
Predicted Effect |
probably null
Transcript: ENSMUST00000015138
|
SMART Domains |
Protein: ENSMUSP00000015138 Gene: ENSMUSG00000029675
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
27 |
N/A |
INTRINSIC |
low complexity region
|
183 |
220 |
N/A |
INTRINSIC |
low complexity region
|
224 |
264 |
N/A |
INTRINSIC |
low complexity region
|
292 |
301 |
N/A |
INTRINSIC |
low complexity region
|
312 |
446 |
N/A |
INTRINSIC |
low complexity region
|
451 |
798 |
N/A |
INTRINSIC |
low complexity region
|
818 |
849 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000201856
|
SMART Domains |
Protein: ENSMUSP00000144555 Gene: ENSMUSG00000029675
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
27 |
N/A |
INTRINSIC |
low complexity region
|
183 |
220 |
N/A |
INTRINSIC |
SCOP:d1iq0a2
|
227 |
280 |
8e-3 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000202570
|
Meta Mutation Damage Score |
0.9755 |
Coding Region Coverage |
- 1x: 79.1%
- 3x: 69.3%
- 10x: 43.3%
- 20x: 23.5%
|
Validation Efficiency |
91% (49/54) |
MGI Phenotype |
FUNCTION: This gene encodes elastin, the extracellular matrix protein that forms a major structural component of several tissues including lungs and arterial walls. Cleavage of the signal peptide from the encoded precursor generates soluble tropoelastin which undergoes lysine-derived crosslinking to form elastin polymers. Mice lacking the encoded protein exhibit defective lung development, and die of an obstructive arterial disease resulting from subendothelial cell proliferation and reorganization of smooth muscle. [provided by RefSeq, Aug 2015] PHENOTYPE: Mice homozygous for null allele die in the early postnatal period of an obstructive arterial disease. They exhibit a decrease in arterial diameter due to subendothelial accumulation of arterial smooth muscle, and display defective terminal airway development resulting in emphysematous morphology. [provided by MGI curators]
|
Allele List at MGI |
All alleles(2) : Targeted(2)
|
Other mutations in this stock |
Total: 17 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Cfap44 |
A |
G |
16: 44,259,432 (GRCm39) |
E1098G |
possibly damaging |
Het |
Cfap95 |
A |
T |
19: 23,593,932 (GRCm39) |
|
probably benign |
Het |
Ctsq |
C |
T |
13: 61,185,485 (GRCm39) |
|
probably null |
Het |
Dock9 |
C |
T |
14: 121,860,265 (GRCm39) |
V886M |
probably damaging |
Het |
Eaf2 |
T |
C |
16: 36,621,020 (GRCm39) |
Y224C |
probably benign |
Het |
Eif5b |
T |
A |
1: 38,058,192 (GRCm39) |
S165T |
probably benign |
Het |
Jakmip1 |
A |
G |
5: 37,291,648 (GRCm39) |
K514R |
probably null |
Het |
Myo1e |
T |
A |
9: 70,248,590 (GRCm39) |
W435R |
probably damaging |
Het |
Nadsyn1 |
T |
C |
7: 143,365,028 (GRCm39) |
I226V |
probably benign |
Het |
Nedd4l |
T |
C |
18: 65,184,194 (GRCm39) |
|
probably benign |
Het |
Phrf1 |
T |
C |
7: 140,841,693 (GRCm39) |
M1435T |
probably damaging |
Het |
Ppic |
A |
T |
18: 53,542,264 (GRCm39) |
I148N |
probably damaging |
Het |
Sdr16c6 |
C |
A |
4: 4,063,335 (GRCm39) |
|
probably benign |
Het |
Sgo2a |
T |
C |
1: 58,054,787 (GRCm39) |
S324P |
probably benign |
Het |
Slf1 |
G |
T |
13: 77,249,070 (GRCm39) |
Q373K |
probably benign |
Het |
Tfg |
G |
T |
16: 56,511,358 (GRCm39) |
Q324K |
probably benign |
Het |
Wdr64 |
G |
T |
1: 175,556,496 (GRCm39) |
G248* |
probably null |
Het |
|
Other mutations in Eln |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01603:Eln
|
APN |
5 |
134,747,894 (GRCm39) |
intron |
probably benign |
|
IGL01941:Eln
|
APN |
5 |
134,747,024 (GRCm39) |
intron |
probably benign |
|
IGL02508:Eln
|
APN |
5 |
134,733,422 (GRCm39) |
utr 3 prime |
probably benign |
|
IGL02654:Eln
|
APN |
5 |
134,745,908 (GRCm39) |
intron |
probably benign |
|
PIT4696001:Eln
|
UTSW |
5 |
134,766,032 (GRCm39) |
missense |
unknown |
|
R0594:Eln
|
UTSW |
5 |
134,741,252 (GRCm39) |
splice site |
probably benign |
|
R0849:Eln
|
UTSW |
5 |
134,736,835 (GRCm39) |
nonsense |
probably null |
|
R1434:Eln
|
UTSW |
5 |
134,758,291 (GRCm39) |
splice site |
probably benign |
|
R1481:Eln
|
UTSW |
5 |
134,735,426 (GRCm39) |
missense |
probably damaging |
0.99 |
R1682:Eln
|
UTSW |
5 |
134,732,636 (GRCm39) |
makesense |
probably null |
|
R1741:Eln
|
UTSW |
5 |
134,758,038 (GRCm39) |
missense |
unknown |
|
R1926:Eln
|
UTSW |
5 |
134,735,421 (GRCm39) |
nonsense |
probably null |
|
R1983:Eln
|
UTSW |
5 |
134,765,194 (GRCm39) |
splice site |
probably null |
|
R2033:Eln
|
UTSW |
5 |
134,738,960 (GRCm39) |
critical splice donor site |
probably null |
|
R2259:Eln
|
UTSW |
5 |
134,758,508 (GRCm39) |
missense |
unknown |
|
R2260:Eln
|
UTSW |
5 |
134,758,508 (GRCm39) |
missense |
unknown |
|
R4450:Eln
|
UTSW |
5 |
134,754,635 (GRCm39) |
intron |
probably benign |
|
R6502:Eln
|
UTSW |
5 |
134,754,628 (GRCm39) |
intron |
probably benign |
|
R7249:Eln
|
UTSW |
5 |
134,739,935 (GRCm39) |
utr 3 prime |
probably benign |
|
R7479:Eln
|
UTSW |
5 |
134,736,429 (GRCm39) |
missense |
unknown |
|
R7819:Eln
|
UTSW |
5 |
134,766,035 (GRCm39) |
missense |
unknown |
|
R7855:Eln
|
UTSW |
5 |
134,739,935 (GRCm39) |
utr 3 prime |
probably benign |
|
R7873:Eln
|
UTSW |
5 |
134,740,041 (GRCm39) |
missense |
unknown |
|
R7923:Eln
|
UTSW |
5 |
134,739,935 (GRCm39) |
utr 3 prime |
probably benign |
|
R8047:Eln
|
UTSW |
5 |
134,758,003 (GRCm39) |
small deletion |
probably benign |
|
R8048:Eln
|
UTSW |
5 |
134,758,003 (GRCm39) |
small deletion |
probably benign |
|
R8073:Eln
|
UTSW |
5 |
134,758,003 (GRCm39) |
small deletion |
probably benign |
|
R8141:Eln
|
UTSW |
5 |
134,758,003 (GRCm39) |
small deletion |
probably benign |
|
R8144:Eln
|
UTSW |
5 |
134,758,003 (GRCm39) |
small deletion |
probably benign |
|
R8344:Eln
|
UTSW |
5 |
134,757,246 (GRCm39) |
missense |
unknown |
|
R8413:Eln
|
UTSW |
5 |
134,755,375 (GRCm39) |
missense |
unknown |
|
R8554:Eln
|
UTSW |
5 |
134,738,964 (GRCm39) |
utr 3 prime |
probably benign |
|
R9213:Eln
|
UTSW |
5 |
134,735,456 (GRCm39) |
missense |
unknown |
|
R9300:Eln
|
UTSW |
5 |
134,758,220 (GRCm39) |
missense |
unknown |
|
R9370:Eln
|
UTSW |
5 |
134,741,476 (GRCm39) |
missense |
unknown |
|
R9420:Eln
|
UTSW |
5 |
134,739,935 (GRCm39) |
utr 3 prime |
probably benign |
|
R9608:Eln
|
UTSW |
5 |
134,755,331 (GRCm39) |
missense |
unknown |
|
R9624:Eln
|
UTSW |
5 |
134,738,991 (GRCm39) |
missense |
unknown |
|
R9701:Eln
|
UTSW |
5 |
134,744,559 (GRCm39) |
missense |
unknown |
|
R9794:Eln
|
UTSW |
5 |
134,751,352 (GRCm39) |
nonsense |
probably null |
|
R9802:Eln
|
UTSW |
5 |
134,744,559 (GRCm39) |
missense |
unknown |
|
Z1177:Eln
|
UTSW |
5 |
134,746,880 (GRCm39) |
missense |
unknown |
|
|
Protein Function and Prediction |
Elastin is a major component of elastic fibers in connective tissue (1) including the extracellular matrix of arteries (2), and in the alveoli of the lung (3). Elastin confers resilience upon structures that undergo repetitive physiologic stress (3;4).
|
Background |
Table 1. Human phenotypes associated with mutations associated with mutations in ELN.
Phenotype
|
OMIM #
|
Description
|
Refs
|
Autosomal dominant cutis laxa
|
123700
|
A collection of disorders that are typified by loose and/or wrinkled skin that imparts a prematurely aged appearance.
|
(5)
|
Supravalvar aortic stenosis
|
185500
|
Localized or diffuse narrowing of the ascending aorta; a frequent feature of Williams-Beuren syndrome
|
(6;7)
|
Williams-Beuren syndrome
|
194050
|
A syndrome characterized by supravalvular aortic stenosis, multiple peripheral pulmonary arterial stenoses, 'elfin face,' mental and statural deficiency, characteristic dental malformation, and infantile hypercalcemia
|
(8)
|
Elntm1Dyl/tm1Dyl; MGI:2153007
involves: 129S1/Sv * 129X1/SvJ * C57BL/6J
Mice homozygous for null allele die in the early postnatal period of an obstructive arterial disease (2;3). They exhibit a decrease in arterial diameter due to subendothelial accumulation of arterial smooth muscle, and display defective terminal airway development resulting in emphysematous morphology (2).
|
References |
1. Uitto, J., Christiano, A. M., Kahari, V. M., Bashir, M. M., and Rosenbloom, J. (1991) Molecular Biology and Pathology of Human Elastin. Biochem Soc Trans. 19, 824-829.
2. Li, D. Y., Brooke, B., Davis, E. C., Mecham, R. P., Sorensen, L. K., Boak, B. B., Eichwald, E., and Keating, M. T. (1998) Elastin is an Essential Determinant of Arterial Morphogenesis. Nature. 393, 276-280.
3. Wendel, D. P., Taylor, D. G., Albertine, K. H., Keating, M. T., and Li, D. Y. (2000) Impaired Distal Airway Development in Mice Lacking Elastin. Am J Respir Cell Mol Biol. 23, 320-326.
5. Szabo, Z., Crepeau, M. W., Mitchell, A. L., Stephan, M. J., Puntel, R. A., Yin Loke, K., Kirk, R. C., and Urban, Z. (2006) Aortic Aneurysmal Disease and Cutis Laxa Caused by Defects in the Elastin Gene. J Med Genet. 43, 255-258.
6. Micale, L., Turturo, M. G., Fusco, C., Augello, B., Jurado, L. A., Izzi, C., Digilio, M. C., Milani, D., Lapi, E., Zelante, L., and Merla, G. (2010) Identification and Characterization of Seven Novel Mutations of Elastin Gene in a Cohort of Patients Affected by Supravalvular Aortic Stenosis. Eur J Hum Genet. 18, 317-323.
7. Ewart, A. K., Jin, W., Atkinson, D., Morris, C. A., and Keating, M. T. (1994) Supravalvular Aortic Stenosis Associated with a Deletion Disrupting the Elastin Gene. J Clin Invest. 93, 1071-1077.
8. Ewart, A. K., Morris, C. A., Atkinson, D., Jin, W., Sternes, K., Spallone, P., Stock, A. D., Leppert, M., and Keating, M. T. (1993) Hemizygosity at the Elastin Locus in a Developmental Disorder, Williams Syndrome. Nat Genet. 5, 11-16.
|
Posted On |
2012-12-21 |
Science Writer |
Anne Murray |