Incidental Mutation 'R1339:Masp1'
ID |
156973 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Masp1
|
Ensembl Gene |
ENSMUSG00000022887 |
Gene Name |
mannan-binding lectin serine peptidase 1 |
Synonyms |
Crarf |
MMRRC Submission |
039404-MU
|
Accession Numbers |
Genbank: NM_008555; MGI: 88492 |
Essential gene? |
Possibly non essential
(E-score: 0.260)
|
Stock # |
R1339 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
16 |
Chromosomal Location |
23449417-23520815 bp(-) (GRCm38) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
C to A
at 23452467 bp (GRCm38)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Cysteine to Phenylalanine
at position 677
(C677F)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000087327
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000089883]
|
AlphaFold |
P98064 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000089883
AA Change: C677F
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000087327 Gene: ENSMUSG00000022887 AA Change: C677F
Domain | Start | End | E-Value | Type |
low complexity region
|
9 |
19 |
N/A |
INTRINSIC |
CUB
|
23 |
143 |
2.96e-36 |
SMART |
EGF_CA
|
144 |
187 |
1.46e-7 |
SMART |
CUB
|
190 |
302 |
1.49e-41 |
SMART |
CCP
|
306 |
367 |
4.41e-12 |
SMART |
CCP
|
372 |
437 |
3.05e-6 |
SMART |
Tryp_SPc
|
453 |
696 |
4.66e-84 |
SMART |
|
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.2%
- 10x: 96.1%
- 20x: 92.9%
|
Validation Efficiency |
|
MGI Phenotype |
PHENOTYPE: Mice homozygous for a knockout allele display decreased survivor rate, reduced body weight, and impaired activation of the lectin and alternative complement pathways. [provided by MGI curators]
|
Allele List at MGI |
All alleles(2) : Targeted, knock-out(1) Gene trapped(1) |
Other mutations in this stock |
Total: 18 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4921517D22Rik |
GCC |
GC |
13: 59,691,598 |
|
probably null |
Het |
Adamts20 |
A |
T |
15: 94,322,896 |
N1385K |
probably benign |
Het |
Cyp4a32 |
A |
G |
4: 115,611,563 |
Y382C |
probably damaging |
Het |
Dtnbp1 |
G |
A |
13: 44,923,220 |
S237L |
probably damaging |
Het |
Foxi1 |
T |
C |
11: 34,205,866 |
T255A |
probably benign |
Het |
Gm15448 |
A |
G |
7: 3,822,156 |
Y496H |
probably damaging |
Het |
Ifi208 |
A |
C |
1: 173,683,238 |
T320P |
probably damaging |
Het |
Inhbc |
C |
A |
10: 127,357,641 |
V169L |
probably benign |
Het |
Irf7 |
G |
A |
7: 141,263,704 |
R320C |
probably damaging |
Het |
March6 |
T |
C |
15: 31,486,402 |
T336A |
probably benign |
Het |
Mei1 |
A |
G |
15: 82,081,995 |
R323G |
possibly damaging |
Het |
Olfr13 |
G |
C |
6: 43,174,610 |
G208A |
probably benign |
Het |
Olfr421-ps1 |
G |
T |
1: 174,152,211 |
G232C |
probably damaging |
Het |
Rel |
C |
T |
11: 23,745,763 |
C208Y |
probably damaging |
Het |
Rsg1 |
A |
G |
4: 141,218,548 |
E134G |
probably damaging |
Het |
Shc2 |
T |
G |
10: 79,626,416 |
T298P |
probably benign |
Het |
Syne1 |
G |
A |
10: 5,367,571 |
L508F |
probably damaging |
Het |
Ubn1 |
A |
G |
16: 5,055,335 |
K74E |
probably damaging |
Het |
|
Other mutations in Masp1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00232:Masp1
|
APN |
16 |
23458091 |
missense |
possibly damaging |
0.93 |
IGL00428:Masp1
|
APN |
16 |
23476312 |
missense |
probably damaging |
1.00 |
IGL00432:Masp1
|
APN |
16 |
23513851 |
missense |
probably damaging |
1.00 |
IGL02598:Masp1
|
APN |
16 |
23459631 |
missense |
probably benign |
|
IGL02718:Masp1
|
APN |
16 |
23476293 |
missense |
probably damaging |
1.00 |
IGL02947:Masp1
|
APN |
16 |
23494726 |
missense |
probably damaging |
0.99 |
A4554:Masp1
|
UTSW |
16 |
23454940 |
splice site |
probably null |
|
PIT1430001:Masp1
|
UTSW |
16 |
23513944 |
missense |
probably damaging |
1.00 |
R0103:Masp1
|
UTSW |
16 |
23458018 |
missense |
probably damaging |
1.00 |
R0505:Masp1
|
UTSW |
16 |
23458138 |
missense |
probably benign |
|
R0630:Masp1
|
UTSW |
16 |
23452419 |
missense |
probably benign |
0.01 |
R1146:Masp1
|
UTSW |
16 |
23492115 |
missense |
probably damaging |
1.00 |
R1146:Masp1
|
UTSW |
16 |
23492115 |
missense |
probably damaging |
1.00 |
R1521:Masp1
|
UTSW |
16 |
23494637 |
missense |
probably damaging |
1.00 |
R1588:Masp1
|
UTSW |
16 |
23494654 |
missense |
probably damaging |
1.00 |
R1961:Masp1
|
UTSW |
16 |
23452932 |
missense |
probably damaging |
1.00 |
R1986:Masp1
|
UTSW |
16 |
23483461 |
missense |
probably benign |
0.01 |
R2080:Masp1
|
UTSW |
16 |
23491959 |
missense |
probably damaging |
1.00 |
R2215:Masp1
|
UTSW |
16 |
23452521 |
missense |
possibly damaging |
0.92 |
R2216:Masp1
|
UTSW |
16 |
23492055 |
missense |
probably benign |
0.00 |
R2443:Masp1
|
UTSW |
16 |
23476312 |
missense |
probably damaging |
1.00 |
R4934:Masp1
|
UTSW |
16 |
23465076 |
missense |
probably damaging |
0.98 |
R5224:Masp1
|
UTSW |
16 |
23494695 |
missense |
probably damaging |
1.00 |
R5340:Masp1
|
UTSW |
16 |
23458108 |
missense |
probably damaging |
1.00 |
R5562:Masp1
|
UTSW |
16 |
23465167 |
splice site |
probably null |
|
R5663:Masp1
|
UTSW |
16 |
23452938 |
missense |
possibly damaging |
0.57 |
R5742:Masp1
|
UTSW |
16 |
23454925 |
missense |
probably benign |
0.01 |
R5763:Masp1
|
UTSW |
16 |
23496247 |
missense |
probably damaging |
1.00 |
R5898:Masp1
|
UTSW |
16 |
23491927 |
missense |
probably damaging |
0.99 |
R6901:Masp1
|
UTSW |
16 |
23513834 |
missense |
probably damaging |
0.99 |
R6987:Masp1
|
UTSW |
16 |
23513915 |
missense |
probably damaging |
1.00 |
R7069:Masp1
|
UTSW |
16 |
23452455 |
missense |
probably benign |
0.20 |
R7356:Masp1
|
UTSW |
16 |
23470243 |
missense |
possibly damaging |
0.50 |
R7512:Masp1
|
UTSW |
16 |
23470124 |
missense |
probably damaging |
1.00 |
R7539:Masp1
|
UTSW |
16 |
23470378 |
missense |
possibly damaging |
0.94 |
R7810:Masp1
|
UTSW |
16 |
23476318 |
missense |
probably benign |
0.01 |
R8026:Masp1
|
UTSW |
16 |
23484406 |
missense |
probably damaging |
1.00 |
R8391:Masp1
|
UTSW |
16 |
23470378 |
missense |
possibly damaging |
0.94 |
R8438:Masp1
|
UTSW |
16 |
23470403 |
missense |
probably benign |
0.38 |
R8475:Masp1
|
UTSW |
16 |
23452531 |
missense |
probably damaging |
0.99 |
R8870:Masp1
|
UTSW |
16 |
23496132 |
missense |
probably damaging |
1.00 |
R9052:Masp1
|
UTSW |
16 |
23520600 |
start gained |
probably benign |
|
R9072:Masp1
|
UTSW |
16 |
23469921 |
missense |
probably benign |
0.07 |
R9073:Masp1
|
UTSW |
16 |
23469921 |
missense |
probably benign |
0.07 |
R9599:Masp1
|
UTSW |
16 |
23452948 |
missense |
probably benign |
0.16 |
R9686:Masp1
|
UTSW |
16 |
23496137 |
missense |
probably damaging |
1.00 |
X0065:Masp1
|
UTSW |
16 |
23513969 |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- CGAATCCCAGTATCACCCAGGAATG -3'
(R):5'- CCCTCCAGTGGCTAATTGTCTGAAC -3'
Sequencing Primer
(F):5'- TATCACCCAGGAATGAGCAGTG -3'
(R):5'- CAGTGGCTAATTGTCTGAACTACAAG -3'
|
Posted On |
2014-02-11 |