Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL00094:Lancl2'

1579

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Lancl2

Ensembl Gene

ENSMUSG00000062190

Gene Name

LanC (bacterial lantibiotic synthetase component C)-like 2

Synonyms

1700003F10Rik

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

IGL00094

Quality Score

Status

Chromosome

Chromosomal Location

57679525-57716424 bp(+) (GRCm39)

Type of Mutation

splice site

DNA Base Change (assembly)

T to A at 57701522 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000121377 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000050077] [ENSMUST00000072954] [ENSMUST00000127485] [ENSMUST00000153777]

AlphaFold

Q9JJK2

Predicted Effect

probably benign
Transcript: ENSMUST00000050077

SMART Domains

Protein: ENSMUSP00000052146
Gene: ENSMUSG00000062190

Domain	Start	End	E-Value	Type
low complexity region	32	44	N/A	INTRINSIC
LANC_like	96	444	2.51e-148	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000072954

SMART Domains

Protein: ENSMUSP00000072723
Gene: ENSMUSG00000062190

Domain	Start	End	E-Value	Type
low complexity region	32	44	N/A	INTRINSIC
LANC_like	96	444	2.51e-148	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000127485

SMART Domains

Protein: ENSMUSP00000115377
Gene: ENSMUSG00000037788

Domain	Start	End	E-Value	Type
signal peptide	1	22	N/A	INTRINSIC
Pfam:WBP-1	37	106	7e-8	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000153777

SMART Domains

Protein: ENSMUSP00000121377
Gene: ENSMUSG00000062190

Domain	Start	End	E-Value	Type
low complexity region	23	35	N/A	INTRINSIC
LANC_like	87	435	2.51e-148	SMART

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 61 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aacs	T	A	5: 125,591,254 (GRCm39)	N547K	probably benign	Het
Abca13	A	G	11: 9,247,443 (GRCm39)	T2397A	probably benign	Het
Abcc1	A	G	16: 14,288,398 (GRCm39)	N1341S	probably null	Het
Adcy9	T	A	16: 4,122,446 (GRCm39)	I535L	probably benign	Het
Akap6	A	G	12: 53,187,763 (GRCm39)	S1726G	possibly damaging	Het
Ap3d1	T	C	10: 80,577,813 (GRCm39)	M5V	probably benign	Het
Ash1l	T	A	3: 88,889,019 (GRCm39)	N299K	probably benign	Het
B3gnt2	C	T	11: 22,786,151 (GRCm39)	V346I	probably benign	Het
Ceacam14	G	A	7: 17,548,062 (GRCm39)	V51I	probably damaging	Het
Cfap69	T	C	5: 5,634,682 (GRCm39)	D812G	probably damaging	Het
Cfap97d1	A	G	11: 101,881,646 (GRCm39)	E114G	possibly damaging	Het
Chrna9	T	C	5: 66,126,600 (GRCm39)	V118A	probably benign	Het
Cpsf7	A	G	19: 10,517,151 (GRCm39)	R418G	probably damaging	Het
Csnk1g3	T	C	18: 54,052,075 (GRCm39)	Y215H	probably damaging	Het
Dcaf5	A	C	12: 80,386,097 (GRCm39)	N676K	probably benign	Het
Dld	A	T	12: 31,385,576 (GRCm39)	M255K	probably benign	Het
Esr2	A	T	12: 76,180,670 (GRCm39)	L417H	probably damaging	Het
Fsip2	T	A	2: 82,820,730 (GRCm39)	S5488T	probably benign	Het
Gatb	A	T	3: 85,509,227 (GRCm39)	I130L	possibly damaging	Het
Gbp9	T	C	5: 105,229,130 (GRCm39)	K506E	probably benign	Het
Hkdc1	T	C	10: 62,229,568 (GRCm39)	N703S	probably damaging	Het
Itgb3	T	A	11: 104,524,410 (GRCm39)	V182E	probably damaging	Het
Itih4	A	T	14: 30,617,426 (GRCm39)	Y582F	probably damaging	Het
Lgals3	A	G	14: 47,622,175 (GRCm39)	K197R	probably benign	Het
Lipe	T	C	7: 25,082,977 (GRCm39)	T767A	probably damaging	Het
Lrp2	T	A	2: 69,338,123 (GRCm39)	D1219V	probably damaging	Het
Lrriq3	T	A	3: 154,806,698 (GRCm39)	C116S	probably benign	Het
Mcm5	T	G	8: 75,851,573 (GRCm39)		probably null	Het
Mtpn	G	T	6: 35,499,711 (GRCm39)	T31K	probably damaging	Het
Mycbp2	A	T	14: 103,460,486 (GRCm39)	Y1494N	probably damaging	Het
Nbeal1	G	T	1: 60,274,350 (GRCm39)	E498*	probably null	Het
Nos1	T	G	5: 118,048,165 (GRCm39)	S657A	probably damaging	Het
Nr3c1	A	T	18: 39,561,661 (GRCm39)		probably null	Het
Or12e7	T	A	2: 87,288,271 (GRCm39)	V254E	probably damaging	Het
Or13a17	A	T	7: 140,271,349 (GRCm39)	H177L	probably damaging	Het
Or4c127	T	A	2: 89,833,365 (GRCm39)	I205N	possibly damaging	Het
Or7g32	T	A	9: 19,408,155 (GRCm39)	I37N	probably damaging	Het
Or8g20	T	C	9: 39,395,944 (GRCm39)	I202V	probably benign	Het
Or8s8	T	G	15: 98,354,299 (GRCm39)	V36G	possibly damaging	Het
Or9i1	A	T	19: 13,839,150 (GRCm39)		probably benign	Het
Osbp2	T	G	11: 3,661,848 (GRCm39)	S735R	probably benign	Het
Otop3	A	T	11: 115,235,279 (GRCm39)	T304S	probably benign	Het
Pcdhac2	A	T	18: 37,278,128 (GRCm39)	L369F	probably damaging	Het
Pick1	T	C	15: 79,131,457 (GRCm39)		probably benign	Het
Prlhr	A	T	19: 60,456,119 (GRCm39)	V149E	probably damaging	Het
Prss12	G	A	3: 123,280,598 (GRCm39)		probably benign	Het
Rab19	A	T	6: 39,365,132 (GRCm39)		probably benign	Het
Ralgapb	T	C	2: 158,262,776 (GRCm39)	W5R	probably damaging	Het
Rfx4	T	A	10: 84,676,063 (GRCm39)	L44Q	probably damaging	Het
Scube2	T	C	7: 109,407,661 (GRCm39)	T760A	probably damaging	Het
Shcbp1	A	C	8: 4,804,258 (GRCm39)	Y145*	probably null	Het
Snx31	T	A	15: 36,545,761 (GRCm39)		probably null	Het
Spopl	A	T	2: 23,427,643 (GRCm39)	V163E	possibly damaging	Het
Sqor	T	C	2: 122,629,463 (GRCm39)	I107T	probably damaging	Het
Tcte1	T	C	17: 45,845,854 (GRCm39)	F153L	probably damaging	Het
Tnfrsf11b	T	A	15: 54,123,238 (GRCm39)	H121L	probably damaging	Het
Tnip1	G	T	11: 54,831,643 (GRCm39)	Y10*	probably null	Het
Tnxb	G	T	17: 34,904,603 (GRCm39)	G1123C	probably damaging	Het
Wdr62	T	C	7: 29,942,948 (GRCm39)	E515G	probably benign	Het
Zfand1	A	T	3: 10,413,590 (GRCm39)	D32E	probably null	Het
Zfp112	A	C	7: 23,821,668 (GRCm39)	T3P	probably damaging	Het

Other mutations in Lancl2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00469:Lancl2	APN	6	57,711,011 (GRCm39)	missense	probably damaging	1.00
IGL00568:Lancl2	APN	6	57,700,470 (GRCm39)	splice site	probably benign
IGL01527:Lancl2	APN	6	57,709,307 (GRCm39)	missense	probably damaging	0.99
IGL02086:Lancl2	APN	6	57,711,024 (GRCm39)	missense	probably damaging	1.00
R0309:Lancl2	UTSW	6	57,680,117 (GRCm39)	missense	probably damaging	1.00
R4202:Lancl2	UTSW	6	57,689,977 (GRCm39)	missense	probably benign	0.02
R4468:Lancl2	UTSW	6	57,690,019 (GRCm39)	missense	probably damaging	1.00
R4469:Lancl2	UTSW	6	57,690,019 (GRCm39)	missense	probably damaging	1.00
R4729:Lancl2	UTSW	6	57,714,697 (GRCm39)	missense	probably damaging	1.00
R4823:Lancl2	UTSW	6	57,709,262 (GRCm39)	missense	probably damaging	1.00
R5296:Lancl2	UTSW	6	57,701,567 (GRCm39)	missense	probably benign	0.05
R5615:Lancl2	UTSW	6	57,699,496 (GRCm39)	missense	probably damaging	1.00
R6619:Lancl2	UTSW	6	57,699,566 (GRCm39)	missense	probably damaging	0.98
R6784:Lancl2	UTSW	6	57,680,240 (GRCm39)	missense	probably benign
R6873:Lancl2	UTSW	6	57,699,642 (GRCm39)	missense	possibly damaging	0.86
R7363:Lancl2	UTSW	6	57,699,664 (GRCm39)	missense	probably benign	0.00
R8018:Lancl2	UTSW	6	57,690,078 (GRCm39)	missense	probably damaging	1.00
R8204:Lancl2	UTSW	6	57,714,701 (GRCm39)	missense	probably damaging	1.00
R9212:Lancl2	UTSW	6	57,714,673 (GRCm39)	missense	probably benign
R9794:Lancl2	UTSW	6	57,714,708 (GRCm39)	missense	probably benign	0.09

Posted On

2011-07-12