Mutagenetix > Incidental Mutations

Incidental Mutation 'R1295:Zfp598'

158093

Institutional Source

Beutler Lab

Gene Symbol

Zfp598

Ensembl Gene

ENSMUSG00000041130

Gene Name

zinc finger protein 598

Synonyms

MMRRC Submission

039361-MU

Accession Numbers

Is this an essential gene?

Probably essential (E-score: 0.965) question?

Stock #

R1295 (G1)

Quality Score

175

Status

Validated

Chromosome

Chromosomal Location

24669752-24682015 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 24679649 bp

Zygosity

Heterozygous

Amino Acid Change

Asparagine to Serine at position 474 (N474S)

Ref Sequence

ENSEMBL: ENSMUSP00000038367 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000047179]

Predicted Effect

probably benign
Transcript: ENSMUST00000047179
AA Change: N474S

PolyPhen 2 Score 0.005 (Sensitivity: 0.97; Specificity: 0.74)

SMART Domains

Protein: ENSMUSP00000038367
Gene: ENSMUSG00000041130
AA Change: N474S

Domain	Start	End	E-Value	Type
low complexity region	2	23	N/A	INTRINSIC
RING	27	66	4.73e-1	SMART
ZnF_C2H2	115	140	9.46e0	SMART
low complexity region	144	153	N/A	INTRINSIC
ZnF_C2H2	185	208	5.2e0	SMART
ZnF_C2H2	209	237	7.11e0	SMART
ZnF_C2H2	238	268	6.47e1	SMART
low complexity region	311	331	N/A	INTRINSIC
low complexity region	344	356	N/A	INTRINSIC
low complexity region	371	385	N/A	INTRINSIC
low complexity region	445	454	N/A	INTRINSIC
low complexity region	482	501	N/A	INTRINSIC
low complexity region	526	544	N/A	INTRINSIC
low complexity region	581	589	N/A	INTRINSIC
low complexity region	645	663	N/A	INTRINSIC
low complexity region	668	683	N/A	INTRINSIC
low complexity region	694	748	N/A	INTRINSIC
ZnF_C2H2	869	890	8.84e1	SMART

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 98.7%
3x: 97.4%
10x: 93.1%
20x: 82.0%

Validation Efficiency

98% (81/83)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Zinc-finger proteins bind nucleic acids and play important roles in various cellular functions, including cell proliferation, differentiation, and apoptosis. This protein and Grb10-interacting GYF protein 2 have been identified as a components of the mammalian 4EHP (m4EHP) complex. The complex is thought to function as a translation repressor in embryonic development. [provided by RefSeq, Oct 2012]

Allele List at MGI

Other mutations in this stock

Total: 65 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Ackr2	A	G	9: 121,908,717	S53G	possibly damaging	Het
Adgrb1	T	A	15: 74,550,039	L886Q	probably damaging	Het
Adprhl1	G	A	8: 13,248,624	T102M	probably damaging	Het
Akap6	A	C	12: 52,887,029	K435Q	probably damaging	Het
Aldh7a1	T	C	18: 56,546,950		probably null	Het
Amfr	T	C	8: 93,974,804	R507G	probably benign	Het
Ap1m1	T	A	8: 72,251,875		probably null	Het
Arhgap29	A	G	3: 121,992,395	H275R	probably benign	Het
Arhgef17	C	A	7: 100,881,269	E428*	probably null	Het
Atm	A	T	9: 53,456,530	V2431E	probably damaging	Het
Atn1	G	T	6: 124,747,787	P161Q	unknown	Het
Atp13a2	T	C	4: 140,993,802	S99P	probably damaging	Het
Ccar1	C	A	10: 62,783,882		probably null	Het
Cdk18	T	C	1: 132,119,960		probably benign	Het
Cep85	A	G	4: 134,167,400	W32R	probably damaging	Het
Col5a3	A	G	9: 20,808,418	F215S	unknown	Het
Decr1	T	C	4: 15,919,207	N312S	possibly damaging	Het
Diaph3	A	T	14: 87,007,399	W178R	probably damaging	Het
Dync2h1	A	G	9: 7,075,752		probably benign	Het
Ehd3	C	A	17: 73,828,186	D352E	probably damaging	Het
Enpp6	T	G	8: 47,065,500	I221S	probably benign	Het
Fam186a	T	C	15: 99,939,789		probably benign	Het
Gm5435	G	T	12: 82,495,784		noncoding transcript	Het
Gm6990	T	A	19: 56,755,334		noncoding transcript	Het
Gpr22	A	C	12: 31,709,514	I203S	probably benign	Het
Gpr61	A	G	3: 108,150,481	V288A	possibly damaging	Het
Grik3	G	A	4: 125,704,564		probably benign	Het
Gstcd	T	C	3: 133,005,628	N431D	probably damaging	Het
Haao	T	A	17: 83,838,838	Q69L	probably benign	Het
Hist1h1b	T	C	13: 21,779,999	S186G	probably benign	Het
Ift140	G	T	17: 25,088,933		probably null	Het
Ikbke	A	G	1: 131,270,226	V381A	probably benign	Het
Ing1	A	C	8: 11,561,501	I38L	probably benign	Het
Ing1	T	A	8: 11,561,502	I38N	probably damaging	Het
Itga4	A	G	2: 79,322,689	M907V	possibly damaging	Het
Kcnk12	C	T	17: 87,746,373	G287D	probably damaging	Het
Kmt2e	A	C	5: 23,502,404	H1655P	probably damaging	Het
Mbtd1	A	G	11: 93,910,359	Y122C	probably damaging	Het
Mslnl	T	C	17: 25,743,240	L204P	probably damaging	Het
Muc6	T	C	7: 141,651,879	E112G	probably benign	Het
Nav3	T	A	10: 109,692,102	D2240V	probably damaging	Het
Ndufaf3	T	C	9: 108,566,693	T9A	probably damaging	Het
Numb	C	A	12: 83,796,161		probably benign	Het
Prodh2	T	C	7: 30,494,089	V79A	probably damaging	Het
Psmb2	A	G	4: 126,687,032	Y73C	probably damaging	Het
Rmnd5a	G	A	6: 71,398,455	L80F	probably benign	Het
Rnf19a	G	T	15: 36,244,101	Y604*	probably null	Het
Ros1	T	A	10: 52,087,932	E1744V	possibly damaging	Het
Rpusd2	T	C	2: 119,036,927	F219L	probably benign	Het
Sall2	T	C	14: 52,313,725	N671S	probably damaging	Het
Sele	T	A	1: 164,050,810	S239R	probably damaging	Het
Serpina3b	T	C	12: 104,130,879	F140L	probably damaging	Het
Stxbp1	A	T	2: 32,794,636	S594T	probably benign	Het
Sufu	G	A	19: 46,454,720		probably benign	Het
Tbx2	A	G	11: 85,834,766	E181G	probably damaging	Het
Thumpd2	A	G	17: 81,055,888	V50A	probably damaging	Het
Tmem56	A	G	3: 121,207,291	V231A	probably benign	Het
Ttn	C	A	2: 76,743,245	R17441L	probably damaging	Het
Usp34	A	G	11: 23,384,477	Y1157C	probably damaging	Het
Vmn1r9	T	C	6: 57,071,537	V199A	probably damaging	Het
Vmn2r6	A	G	3: 64,538,273	F677S	probably damaging	Het
Vmn2r84	C	T	10: 130,389,139	A501T	probably benign	Het
Wapl	C	T	14: 34,724,769	P605S	probably damaging	Het
Zfyve26	A	G	12: 79,274,920	L975P	probably damaging	Het
Zp3r	C	T	1: 130,591,444	G255D	probably damaging	Het

Other mutations in Zfp598

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01358:Zfp598	APN	17	24681424	unclassified	probably benign
IGL02118:Zfp598	APN	17	24677617	missense	probably damaging	1.00
IGL02178:Zfp598	APN	17	24677543	missense	probably damaging	1.00
IGL02591:Zfp598	APN	17	24677504	missense	probably damaging	1.00
IGL03061:Zfp598	APN	17	24679592	missense	probably benign	0.03
FR4304:Zfp598	UTSW	17	24680775	small insertion	probably benign
FR4340:Zfp598	UTSW	17	24679372	small deletion	probably benign
FR4340:Zfp598	UTSW	17	24680783	small insertion	probably benign
FR4342:Zfp598	UTSW	17	24680780	small insertion	probably benign
FR4449:Zfp598	UTSW	17	24680776	small insertion	probably benign
FR4449:Zfp598	UTSW	17	24680785	small insertion	probably benign
FR4548:Zfp598	UTSW	17	24680775	small insertion	probably benign
FR4548:Zfp598	UTSW	17	24680776	small insertion	probably benign
FR4589:Zfp598	UTSW	17	24680779	small insertion	probably benign
FR4737:Zfp598	UTSW	17	24680776	small insertion	probably benign
FR4737:Zfp598	UTSW	17	24680782	small insertion	probably benign
FR4737:Zfp598	UTSW	17	24680791	small insertion	probably benign
FR4976:Zfp598	UTSW	17	24679372	small deletion	probably benign
FR4976:Zfp598	UTSW	17	24680782	small insertion	probably benign
R0309:Zfp598	UTSW	17	24678584	splice site	probably benign
R1296:Zfp598	UTSW	17	24679649	missense	probably benign	0.00
R1471:Zfp598	UTSW	17	24680072	missense	probably benign	0.00
R1523:Zfp598	UTSW	17	24678629	missense	probably null	1.00
R1819:Zfp598	UTSW	17	24681130	unclassified	probably benign
R2001:Zfp598	UTSW	17	24669924	missense	possibly damaging	0.94
R2080:Zfp598	UTSW	17	24679667	missense	probably damaging	1.00
R4447:Zfp598	UTSW	17	24676555	missense	probably damaging	1.00
R5086:Zfp598	UTSW	17	24680898	unclassified	probably benign
R5923:Zfp598	UTSW	17	24677549	missense	probably damaging	1.00
R6191:Zfp598	UTSW	17	24677876	missense	possibly damaging	0.89
R6680:Zfp598	UTSW	17	24678686	missense	probably benign	0.06
R7438:Zfp598	UTSW	17	24677530	missense	probably damaging	1.00
RF005:Zfp598	UTSW	17	24680794	frame shift	probably null
RF009:Zfp598	UTSW	17	24680787	small insertion	probably benign
RF016:Zfp598	UTSW	17	24680771	small insertion	probably benign
RF018:Zfp598	UTSW	17	24680771	small insertion	probably benign
RF021:Zfp598	UTSW	17	24680787	small insertion	probably benign
RF053:Zfp598	UTSW	17	24680761	small insertion	probably benign
RF058:Zfp598	UTSW	17	24680761	small insertion	probably benign
RF061:Zfp598	UTSW	17	24680770	small insertion	probably benign
RF064:Zfp598	UTSW	17	24680783	small insertion	probably benign
Z1088:Zfp598	UTSW	17	24680210	small insertion	probably benign

Predicted Primers

PCR Primer
(F):5'- GGCCTGGTGATGGTGTAACTCTAAC -3'
(R):5'- TGCCAACCTTGGCTGAACTCTG -3'

Sequencing Primer
(F):5'- GTGATGGTGTAACTCTAACCAGTCC -3'
(R):5'- AGTGAGGCCACCGCTATC -3'

Posted On

2014-02-18