|Institutional Source||Beutler Lab|
|Gene Name||transmembrane channel-like gene family 1|
|Synonyms||4933416G09Rik, Beethoven, Bth|
|Essential gene?||Possibly non essential (E-score: 0.291)|
|Stock #||R1404 (G1)|
|Chromosomal Location||20783458-20954202 bp(-) (GRCm38)|
|Type of Mutation||missense|
|DNA Base Change (assembly)||T to A at 20816184 bp (GRCm38)|
|Amino Acid Change||Isoleucine to Phenylalanine at position 538 (I538F)|
|Ref Sequence||ENSEMBL: ENSMUSP00000040859 (fasta)|
|Gene Model||predicted gene model for transcript(s): [ENSMUST00000039500]|
AA Change: I538F
PolyPhen 2 Score 0.792 (Sensitivity: 0.85; Specificity: 0.93)
AA Change: I538F
|Meta Mutation Damage Score||0.3686|
|Coding Region Coverage||
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene is considered a member of a gene family predicted to encode transmembrane proteins. The specific function of this gene is unknown; however, it is known to be required for normal function of cochlear hair cells. Mutations in this gene have been associated with progressive postlingual hearing loss and profound prelingual deafness. [provided by RefSeq, Jul 2008]
PHENOTYPE: Mutant mice are characterized by progressive degeneration of the cochlear inner hair cells and concomitant deafness. Different alleles causing progressive deafness or profound congenital deafness. [provided by MGI curators]
|Allele List at MGI|
|Other mutations in this stock||
|Other mutations in Tmc1||
(F):5'- AGTCCAGCAGCAAAATTCACAGGG -3'
(R):5'- TCTTCAAGCCAGTGACAGAAACACG -3'
(F):5'- GGGGCCAAGATTTCCTTCAAC -3'
(R):5'- GACAGAAACACGACAGTTTTGATAC -3'