Incidental Mutation 'R1386:Ttc28'
ID |
160578 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Ttc28
|
Ensembl Gene |
ENSMUSG00000033209 |
Gene Name |
tetratricopeptide repeat domain 28 |
Synonyms |
TPRBK, 2310015L07Rik |
MMRRC Submission |
039448-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R1386 (G1)
|
Quality Score |
185 |
Status
|
Not validated
|
Chromosome |
5 |
Chromosomal Location |
111027669-111437646 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
G to A
at 111373543 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Serine to Asparagine
at position 962
(S962N)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000137609
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000040111]
[ENSMUST00000156290]
|
AlphaFold |
Q80XJ3 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000040111
AA Change: S993N
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000136116 Gene: ENSMUSG00000033209 AA Change: S993N
Domain | Start | End | E-Value | Type |
low complexity region
|
4 |
28 |
N/A |
INTRINSIC |
TPR
|
52 |
85 |
2.84e1 |
SMART |
TPR
|
86 |
119 |
5.03e-1 |
SMART |
TPR
|
120 |
153 |
2.11e-3 |
SMART |
TPR
|
268 |
301 |
8.51e0 |
SMART |
TPR
|
339 |
372 |
1.78e-1 |
SMART |
TPR
|
379 |
412 |
2.82e-4 |
SMART |
TPR
|
419 |
452 |
9.98e-5 |
SMART |
TPR
|
459 |
492 |
1.88e0 |
SMART |
TPR
|
499 |
532 |
1.11e1 |
SMART |
TPR
|
539 |
572 |
2.93e-2 |
SMART |
TPR
|
579 |
612 |
1.21e-3 |
SMART |
TPR
|
619 |
652 |
4.91e-4 |
SMART |
TPR
|
659 |
692 |
7.56e-5 |
SMART |
TPR
|
699 |
732 |
8.29e0 |
SMART |
TPR
|
739 |
772 |
1.63e0 |
SMART |
TPR
|
779 |
812 |
1.24e0 |
SMART |
TPR
|
819 |
852 |
7.98e-4 |
SMART |
TPR
|
859 |
892 |
8.74e0 |
SMART |
TPR
|
902 |
935 |
5.43e-6 |
SMART |
TPR
|
942 |
975 |
4.09e-1 |
SMART |
TPR
|
982 |
1015 |
9.98e-5 |
SMART |
TPR
|
1022 |
1055 |
7.12e-1 |
SMART |
TPR
|
1062 |
1095 |
5.69e0 |
SMART |
TPR
|
1102 |
1135 |
3.14e-2 |
SMART |
TPR
|
1142 |
1175 |
2.84e1 |
SMART |
low complexity region
|
1259 |
1277 |
N/A |
INTRINSIC |
Pfam:CHAT
|
1415 |
1738 |
7.3e-77 |
PFAM |
low complexity region
|
1972 |
1990 |
N/A |
INTRINSIC |
low complexity region
|
2014 |
2031 |
N/A |
INTRINSIC |
low complexity region
|
2033 |
2045 |
N/A |
INTRINSIC |
low complexity region
|
2155 |
2171 |
N/A |
INTRINSIC |
low complexity region
|
2283 |
2293 |
N/A |
INTRINSIC |
low complexity region
|
2327 |
2352 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000125470
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000156290
AA Change: S962N
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000137609 Gene: ENSMUSG00000033209 AA Change: S962N
Domain | Start | End | E-Value | Type |
low complexity region
|
4 |
28 |
N/A |
INTRINSIC |
TPR
|
52 |
85 |
2.84e1 |
SMART |
TPR
|
86 |
119 |
5.03e-1 |
SMART |
TPR
|
120 |
153 |
2.11e-3 |
SMART |
TPR
|
268 |
301 |
8.51e0 |
SMART |
TPR
|
308 |
341 |
1.78e-1 |
SMART |
TPR
|
348 |
381 |
2.82e-4 |
SMART |
TPR
|
388 |
421 |
9.98e-5 |
SMART |
TPR
|
428 |
461 |
1.88e0 |
SMART |
TPR
|
468 |
501 |
1.11e1 |
SMART |
TPR
|
508 |
541 |
2.93e-2 |
SMART |
TPR
|
548 |
581 |
1.21e-3 |
SMART |
TPR
|
588 |
621 |
4.91e-4 |
SMART |
TPR
|
628 |
661 |
7.56e-5 |
SMART |
TPR
|
668 |
701 |
8.29e0 |
SMART |
TPR
|
708 |
741 |
1.63e0 |
SMART |
TPR
|
748 |
781 |
1.24e0 |
SMART |
TPR
|
788 |
821 |
7.98e-4 |
SMART |
TPR
|
828 |
861 |
8.74e0 |
SMART |
TPR
|
871 |
904 |
5.43e-6 |
SMART |
TPR
|
911 |
944 |
4.09e-1 |
SMART |
TPR
|
951 |
984 |
9.98e-5 |
SMART |
TPR
|
991 |
1024 |
7.12e-1 |
SMART |
TPR
|
1031 |
1064 |
5.69e0 |
SMART |
TPR
|
1071 |
1104 |
3.14e-2 |
SMART |
TPR
|
1111 |
1144 |
2.84e1 |
SMART |
low complexity region
|
1228 |
1246 |
N/A |
INTRINSIC |
Pfam:CHAT
|
1384 |
1707 |
1.1e-76 |
PFAM |
low complexity region
|
1941 |
1959 |
N/A |
INTRINSIC |
low complexity region
|
1983 |
2000 |
N/A |
INTRINSIC |
low complexity region
|
2002 |
2014 |
N/A |
INTRINSIC |
low complexity region
|
2124 |
2140 |
N/A |
INTRINSIC |
low complexity region
|
2252 |
2262 |
N/A |
INTRINSIC |
low complexity region
|
2296 |
2321 |
N/A |
INTRINSIC |
|
Meta Mutation Damage Score |
0.0827 |
Coding Region Coverage |
- 1x: 98.8%
- 3x: 97.8%
- 10x: 94.5%
- 20x: 87.0%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 103 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abca6 |
T |
C |
11: 110,135,081 (GRCm39) |
I235V |
probably benign |
Het |
Acsm4 |
T |
C |
7: 119,297,801 (GRCm39) |
I146T |
probably benign |
Het |
Adgrv1 |
T |
C |
13: 81,676,984 (GRCm39) |
N1949S |
probably benign |
Het |
Afdn |
T |
C |
17: 14,066,798 (GRCm39) |
V630A |
probably damaging |
Het |
Amfr |
A |
G |
8: 94,712,027 (GRCm39) |
V301A |
possibly damaging |
Het |
Anapc16 |
T |
C |
10: 59,832,279 (GRCm39) |
M45V |
probably benign |
Het |
Ankrd12 |
T |
C |
17: 66,290,375 (GRCm39) |
E1686G |
possibly damaging |
Het |
Ap2m1 |
T |
G |
16: 20,359,979 (GRCm39) |
H193Q |
probably damaging |
Het |
Aplnr |
T |
C |
2: 84,967,805 (GRCm39) |
W277R |
possibly damaging |
Het |
Aspm |
C |
T |
1: 139,406,710 (GRCm39) |
H1866Y |
possibly damaging |
Het |
Aspm |
A |
G |
1: 139,385,361 (GRCm39) |
E335G |
probably benign |
Het |
Atp8b4 |
T |
A |
2: 126,220,664 (GRCm39) |
D578V |
probably benign |
Het |
Ccr1 |
T |
A |
9: 123,763,999 (GRCm39) |
E177V |
probably benign |
Het |
Cecr2 |
A |
G |
6: 120,739,092 (GRCm39) |
E1245G |
probably damaging |
Het |
Cep162 |
A |
T |
9: 87,103,255 (GRCm39) |
C638S |
probably benign |
Het |
Ces1b |
A |
T |
8: 93,794,705 (GRCm39) |
I298N |
probably benign |
Het |
Cfap47 |
C |
T |
X: 78,553,507 (GRCm39) |
V323I |
possibly damaging |
Het |
Chdh |
T |
A |
14: 29,753,391 (GRCm39) |
L100Q |
probably damaging |
Het |
Chrnd |
T |
C |
1: 87,120,312 (GRCm39) |
I156T |
probably damaging |
Het |
Clpx |
G |
A |
9: 65,234,170 (GRCm39) |
R605Q |
probably null |
Het |
Cnga1 |
T |
A |
5: 72,769,526 (GRCm39) |
K135* |
probably null |
Het |
Col6a4 |
A |
T |
9: 105,940,144 (GRCm39) |
V1262E |
probably benign |
Het |
Cracr2b |
T |
C |
7: 141,043,481 (GRCm39) |
L53P |
probably damaging |
Het |
Crhr1 |
T |
C |
11: 104,065,220 (GRCm39) |
S372P |
possibly damaging |
Het |
Cyp11b2 |
T |
A |
15: 74,723,624 (GRCm39) |
|
probably null |
Het |
Cyp21a1 |
T |
A |
17: 35,021,184 (GRCm39) |
D373V |
probably damaging |
Het |
D6Ertd527e |
C |
G |
6: 87,088,506 (GRCm39) |
T223S |
unknown |
Het |
Ddah1 |
A |
T |
3: 145,594,966 (GRCm39) |
Y242F |
probably benign |
Het |
Dlgap3 |
A |
G |
4: 127,088,719 (GRCm39) |
D105G |
possibly damaging |
Het |
Dtl |
A |
G |
1: 191,301,829 (GRCm39) |
V76A |
probably damaging |
Het |
Dzank1 |
A |
G |
2: 144,333,751 (GRCm39) |
S361P |
probably benign |
Het |
Ehd3 |
T |
A |
17: 74,127,538 (GRCm39) |
I157N |
probably damaging |
Het |
Elk4 |
T |
C |
1: 131,945,568 (GRCm39) |
F149L |
probably damaging |
Het |
Eme2 |
G |
A |
17: 25,111,892 (GRCm39) |
S263F |
probably damaging |
Het |
Fam83a |
A |
G |
15: 57,849,899 (GRCm39) |
R148G |
probably damaging |
Het |
Farp2 |
C |
A |
1: 93,547,873 (GRCm39) |
|
probably null |
Het |
Fbxw25 |
T |
A |
9: 109,483,709 (GRCm39) |
I168F |
possibly damaging |
Het |
Fermt1 |
T |
C |
2: 132,757,978 (GRCm39) |
D479G |
probably damaging |
Het |
Fgf17 |
C |
A |
14: 70,874,210 (GRCm39) |
R193L |
probably damaging |
Het |
Foxred2 |
T |
G |
15: 77,832,721 (GRCm39) |
|
probably null |
Het |
Gad1 |
T |
C |
2: 70,404,467 (GRCm39) |
V119A |
possibly damaging |
Het |
Gas2l3 |
A |
G |
10: 89,250,215 (GRCm39) |
V301A |
possibly damaging |
Het |
Gimap8 |
G |
A |
6: 48,633,587 (GRCm39) |
V469I |
probably benign |
Het |
Gja1 |
A |
T |
10: 56,264,065 (GRCm39) |
E141D |
probably benign |
Het |
Glod4 |
C |
T |
11: 76,112,829 (GRCm39) |
W268* |
probably null |
Het |
Guf1 |
C |
T |
5: 69,720,505 (GRCm39) |
H309Y |
probably benign |
Het |
Hax1 |
A |
G |
3: 89,903,156 (GRCm39) |
V215A |
probably damaging |
Het |
Heatr9 |
T |
C |
11: 83,409,651 (GRCm39) |
D107G |
probably benign |
Het |
Hephl1 |
T |
A |
9: 14,988,050 (GRCm39) |
Y686F |
probably benign |
Het |
Hk3 |
T |
C |
13: 55,154,843 (GRCm39) |
|
probably null |
Het |
Ikbkb |
G |
T |
8: 23,155,633 (GRCm39) |
Q620K |
possibly damaging |
Het |
Il18rap |
C |
T |
1: 40,570,682 (GRCm39) |
A208V |
probably benign |
Het |
Kif26b |
T |
C |
1: 178,743,209 (GRCm39) |
S1102P |
probably benign |
Het |
Kif5b |
A |
T |
18: 6,226,383 (GRCm39) |
D147E |
probably damaging |
Het |
Klhl3 |
T |
C |
13: 58,178,247 (GRCm39) |
T348A |
probably damaging |
Het |
Krt10 |
T |
C |
11: 99,276,746 (GRCm39) |
|
probably benign |
Het |
Lama3 |
A |
T |
18: 12,610,427 (GRCm39) |
H1124L |
probably benign |
Het |
Lin7a |
A |
T |
10: 107,247,983 (GRCm39) |
Q96L |
unknown |
Het |
Ly6c2 |
T |
G |
15: 74,982,438 (GRCm39) |
I37L |
probably benign |
Het |
Mov10l1 |
A |
G |
15: 88,895,589 (GRCm39) |
Y585C |
possibly damaging |
Het |
Msr1 |
G |
A |
8: 40,042,334 (GRCm39) |
Q414* |
probably null |
Het |
Myh13 |
T |
C |
11: 67,261,776 (GRCm39) |
C1900R |
possibly damaging |
Het |
Obscn |
T |
A |
11: 59,024,679 (GRCm39) |
N454Y |
probably damaging |
Het |
Olfml2b |
T |
G |
1: 170,508,731 (GRCm39) |
Y530D |
probably damaging |
Het |
Or1ad1 |
T |
C |
11: 50,876,194 (GRCm39) |
F222S |
probably damaging |
Het |
Or4c11 |
T |
A |
2: 88,695,697 (GRCm39) |
F249L |
probably benign |
Het |
Or52s1b |
T |
A |
7: 102,822,574 (GRCm39) |
H90L |
probably benign |
Het |
Or5b24 |
A |
T |
19: 12,912,503 (GRCm39) |
T134S |
probably benign |
Het |
Or7e174 |
T |
A |
9: 20,012,878 (GRCm39) |
N274K |
probably benign |
Het |
Or8j3b |
A |
G |
2: 86,205,265 (GRCm39) |
F164L |
probably damaging |
Het |
Pde10a |
T |
G |
17: 9,172,574 (GRCm39) |
V648G |
probably damaging |
Het |
Pde7b |
T |
A |
10: 20,294,547 (GRCm39) |
H258L |
probably damaging |
Het |
Pik3cb |
A |
G |
9: 98,946,080 (GRCm39) |
V582A |
possibly damaging |
Het |
Plxnb1 |
T |
C |
9: 108,930,091 (GRCm39) |
S316P |
probably benign |
Het |
Pmpca |
C |
T |
2: 26,282,530 (GRCm39) |
T246I |
probably damaging |
Het |
Reep3 |
A |
T |
10: 66,898,788 (GRCm39) |
V32D |
possibly damaging |
Het |
Rfx4 |
A |
G |
10: 84,699,149 (GRCm39) |
M252V |
probably damaging |
Het |
Rnf168 |
C |
A |
16: 32,117,781 (GRCm39) |
D447E |
probably damaging |
Het |
Rnf31 |
T |
C |
14: 55,834,221 (GRCm39) |
V518A |
probably damaging |
Het |
Rnpc3 |
A |
T |
3: 113,407,433 (GRCm39) |
L340* |
probably null |
Het |
Scn2a |
A |
G |
2: 65,519,085 (GRCm39) |
E437G |
probably damaging |
Het |
Scnn1b |
C |
A |
7: 121,501,711 (GRCm39) |
N175K |
possibly damaging |
Het |
Slc39a11 |
T |
A |
11: 113,138,550 (GRCm39) |
I344F |
probably benign |
Het |
Slc9a2 |
T |
A |
1: 40,758,178 (GRCm39) |
L239Q |
probably damaging |
Het |
Smg5 |
T |
C |
3: 88,262,978 (GRCm39) |
F794L |
probably damaging |
Het |
Smim13 |
C |
T |
13: 41,426,168 (GRCm39) |
S68L |
possibly damaging |
Het |
Sos2 |
A |
T |
12: 69,661,432 (GRCm39) |
Y680N |
probably damaging |
Het |
Spag6 |
T |
A |
2: 18,739,057 (GRCm39) |
M329K |
possibly damaging |
Het |
Spire2 |
G |
A |
8: 124,088,105 (GRCm39) |
|
probably null |
Het |
Tdrd9 |
T |
A |
12: 112,011,238 (GRCm39) |
V1149D |
probably benign |
Het |
Tns3 |
T |
A |
11: 8,468,261 (GRCm39) |
Y321F |
probably benign |
Het |
Top3b |
T |
C |
16: 16,698,493 (GRCm39) |
V112A |
probably benign |
Het |
Trafd1 |
G |
A |
5: 121,517,715 (GRCm39) |
T26I |
probably damaging |
Het |
Vmn2r78 |
T |
C |
7: 86,564,615 (GRCm39) |
L20S |
unknown |
Het |
Vmn2r82 |
A |
T |
10: 79,214,545 (GRCm39) |
D176V |
probably damaging |
Het |
Vps13b |
T |
C |
15: 35,923,458 (GRCm39) |
F3778L |
probably damaging |
Het |
Vwa3b |
T |
C |
1: 37,090,962 (GRCm39) |
|
probably null |
Het |
Vwc2 |
C |
T |
11: 11,104,262 (GRCm39) |
P265S |
probably damaging |
Het |
Zbtb9 |
T |
A |
17: 27,193,612 (GRCm39) |
I339N |
probably damaging |
Het |
Zfp335 |
T |
C |
2: 164,740,161 (GRCm39) |
T764A |
probably benign |
Het |
Zfp366 |
T |
A |
13: 99,383,063 (GRCm39) |
V742D |
probably damaging |
Het |
Zfp709 |
A |
T |
8: 72,644,506 (GRCm39) |
Y645F |
probably damaging |
Het |
Zmym2 |
T |
A |
14: 57,150,548 (GRCm39) |
C424S |
probably damaging |
Het |
|
Other mutations in Ttc28 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00516:Ttc28
|
APN |
5 |
111,373,554 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00963:Ttc28
|
APN |
5 |
111,434,255 (GRCm39) |
nonsense |
probably null |
|
IGL00969:Ttc28
|
APN |
5 |
111,373,606 (GRCm39) |
missense |
probably benign |
0.00 |
IGL01366:Ttc28
|
APN |
5 |
111,233,037 (GRCm39) |
critical splice donor site |
probably null |
|
IGL01528:Ttc28
|
APN |
5 |
111,249,826 (GRCm39) |
splice site |
probably benign |
|
IGL01558:Ttc28
|
APN |
5 |
111,431,828 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01973:Ttc28
|
APN |
5 |
111,372,101 (GRCm39) |
missense |
possibly damaging |
0.88 |
IGL02040:Ttc28
|
APN |
5 |
111,040,802 (GRCm39) |
nonsense |
probably null |
|
IGL02432:Ttc28
|
APN |
5 |
111,371,101 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02531:Ttc28
|
APN |
5 |
111,373,716 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02819:Ttc28
|
APN |
5 |
111,414,449 (GRCm39) |
missense |
probably benign |
|
IGL02830:Ttc28
|
APN |
5 |
111,434,105 (GRCm39) |
missense |
probably benign |
0.10 |
IGL02893:Ttc28
|
APN |
5 |
111,433,251 (GRCm39) |
missense |
possibly damaging |
0.87 |
IGL03387:Ttc28
|
APN |
5 |
111,381,208 (GRCm39) |
missense |
probably benign |
0.07 |
PIT4131001:Ttc28
|
UTSW |
5 |
111,040,719 (GRCm39) |
missense |
probably benign |
0.00 |
R0142:Ttc28
|
UTSW |
5 |
111,425,323 (GRCm39) |
missense |
probably benign |
0.40 |
R0166:Ttc28
|
UTSW |
5 |
111,373,500 (GRCm39) |
missense |
probably benign |
0.01 |
R0328:Ttc28
|
UTSW |
5 |
111,431,933 (GRCm39) |
splice site |
probably benign |
|
R0582:Ttc28
|
UTSW |
5 |
111,331,162 (GRCm39) |
missense |
probably damaging |
1.00 |
R0744:Ttc28
|
UTSW |
5 |
111,378,947 (GRCm39) |
missense |
probably damaging |
1.00 |
R0811:Ttc28
|
UTSW |
5 |
111,383,366 (GRCm39) |
missense |
probably benign |
0.24 |
R0812:Ttc28
|
UTSW |
5 |
111,383,366 (GRCm39) |
missense |
probably benign |
0.24 |
R0828:Ttc28
|
UTSW |
5 |
111,371,312 (GRCm39) |
missense |
probably damaging |
1.00 |
R0833:Ttc28
|
UTSW |
5 |
111,378,947 (GRCm39) |
missense |
probably damaging |
1.00 |
R1013:Ttc28
|
UTSW |
5 |
111,424,831 (GRCm39) |
missense |
probably benign |
0.01 |
R1168:Ttc28
|
UTSW |
5 |
111,378,977 (GRCm39) |
missense |
probably damaging |
1.00 |
R1194:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1195:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1195:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1195:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1196:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1205:Ttc28
|
UTSW |
5 |
111,433,635 (GRCm39) |
missense |
probably benign |
0.04 |
R1467:Ttc28
|
UTSW |
5 |
111,433,254 (GRCm39) |
missense |
probably benign |
0.00 |
R1467:Ttc28
|
UTSW |
5 |
111,433,254 (GRCm39) |
missense |
probably benign |
0.00 |
R1537:Ttc28
|
UTSW |
5 |
111,433,184 (GRCm39) |
missense |
probably damaging |
0.96 |
R1539:Ttc28
|
UTSW |
5 |
111,248,677 (GRCm39) |
missense |
possibly damaging |
0.77 |
R1558:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1560:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1561:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1566:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1768:Ttc28
|
UTSW |
5 |
111,425,034 (GRCm39) |
missense |
possibly damaging |
0.77 |
R1775:Ttc28
|
UTSW |
5 |
111,424,677 (GRCm39) |
missense |
probably benign |
0.00 |
R1909:Ttc28
|
UTSW |
5 |
111,431,920 (GRCm39) |
critical splice donor site |
probably null |
|
R1911:Ttc28
|
UTSW |
5 |
111,428,616 (GRCm39) |
missense |
possibly damaging |
0.93 |
R1970:Ttc28
|
UTSW |
5 |
111,383,501 (GRCm39) |
missense |
probably benign |
0.00 |
R1990:Ttc28
|
UTSW |
5 |
111,424,188 (GRCm39) |
missense |
probably benign |
0.37 |
R1992:Ttc28
|
UTSW |
5 |
111,424,188 (GRCm39) |
missense |
probably benign |
0.37 |
R2066:Ttc28
|
UTSW |
5 |
111,373,799 (GRCm39) |
missense |
probably benign |
0.01 |
R2112:Ttc28
|
UTSW |
5 |
111,424,139 (GRCm39) |
missense |
probably damaging |
0.99 |
R2158:Ttc28
|
UTSW |
5 |
111,325,483 (GRCm39) |
intron |
probably benign |
|
R2192:Ttc28
|
UTSW |
5 |
111,371,362 (GRCm39) |
missense |
probably damaging |
0.99 |
R2267:Ttc28
|
UTSW |
5 |
111,373,869 (GRCm39) |
missense |
possibly damaging |
0.75 |
R2384:Ttc28
|
UTSW |
5 |
111,424,074 (GRCm39) |
missense |
possibly damaging |
0.95 |
R2989:Ttc28
|
UTSW |
5 |
111,371,881 (GRCm39) |
missense |
probably benign |
0.29 |
R3881:Ttc28
|
UTSW |
5 |
111,331,106 (GRCm39) |
missense |
probably damaging |
1.00 |
R3919:Ttc28
|
UTSW |
5 |
111,433,245 (GRCm39) |
missense |
possibly damaging |
0.80 |
R4455:Ttc28
|
UTSW |
5 |
111,371,924 (GRCm39) |
frame shift |
probably null |
|
R4456:Ttc28
|
UTSW |
5 |
111,371,924 (GRCm39) |
frame shift |
probably null |
|
R4522:Ttc28
|
UTSW |
5 |
111,428,038 (GRCm39) |
missense |
probably benign |
0.01 |
R4548:Ttc28
|
UTSW |
5 |
111,419,090 (GRCm39) |
missense |
possibly damaging |
0.86 |
R4591:Ttc28
|
UTSW |
5 |
111,371,147 (GRCm39) |
missense |
probably damaging |
1.00 |
R4633:Ttc28
|
UTSW |
5 |
111,371,867 (GRCm39) |
missense |
probably damaging |
1.00 |
R4700:Ttc28
|
UTSW |
5 |
111,424,909 (GRCm39) |
missense |
probably damaging |
1.00 |
R4714:Ttc28
|
UTSW |
5 |
111,433,095 (GRCm39) |
missense |
possibly damaging |
0.65 |
R4790:Ttc28
|
UTSW |
5 |
111,372,083 (GRCm39) |
missense |
possibly damaging |
0.94 |
R4803:Ttc28
|
UTSW |
5 |
111,425,329 (GRCm39) |
missense |
possibly damaging |
0.90 |
R4840:Ttc28
|
UTSW |
5 |
111,433,947 (GRCm39) |
missense |
probably damaging |
1.00 |
R4969:Ttc28
|
UTSW |
5 |
111,424,121 (GRCm39) |
missense |
probably damaging |
0.96 |
R5019:Ttc28
|
UTSW |
5 |
111,249,930 (GRCm39) |
missense |
possibly damaging |
0.47 |
R5130:Ttc28
|
UTSW |
5 |
111,040,722 (GRCm39) |
missense |
probably benign |
|
R5150:Ttc28
|
UTSW |
5 |
111,373,555 (GRCm39) |
missense |
probably damaging |
1.00 |
R5214:Ttc28
|
UTSW |
5 |
111,325,489 (GRCm39) |
intron |
probably benign |
|
R5254:Ttc28
|
UTSW |
5 |
111,419,104 (GRCm39) |
missense |
probably benign |
0.01 |
R5518:Ttc28
|
UTSW |
5 |
111,373,794 (GRCm39) |
missense |
probably benign |
0.17 |
R5851:Ttc28
|
UTSW |
5 |
111,383,335 (GRCm39) |
splice site |
probably benign |
|
R5931:Ttc28
|
UTSW |
5 |
111,232,975 (GRCm39) |
missense |
possibly damaging |
0.81 |
R6011:Ttc28
|
UTSW |
5 |
111,434,309 (GRCm39) |
missense |
probably benign |
|
R6176:Ttc28
|
UTSW |
5 |
111,371,851 (GRCm39) |
missense |
probably damaging |
1.00 |
R6221:Ttc28
|
UTSW |
5 |
111,419,114 (GRCm39) |
missense |
probably benign |
0.00 |
R6398:Ttc28
|
UTSW |
5 |
111,424,142 (GRCm39) |
missense |
probably damaging |
1.00 |
R6717:Ttc28
|
UTSW |
5 |
111,433,302 (GRCm39) |
missense |
probably benign |
|
R6770:Ttc28
|
UTSW |
5 |
111,434,006 (GRCm39) |
missense |
probably damaging |
1.00 |
R6901:Ttc28
|
UTSW |
5 |
111,424,891 (GRCm39) |
missense |
possibly damaging |
0.88 |
R7038:Ttc28
|
UTSW |
5 |
111,414,445 (GRCm39) |
missense |
probably benign |
0.09 |
R7073:Ttc28
|
UTSW |
5 |
111,371,282 (GRCm39) |
missense |
possibly damaging |
0.96 |
R7101:Ttc28
|
UTSW |
5 |
111,232,958 (GRCm39) |
missense |
probably damaging |
1.00 |
R7135:Ttc28
|
UTSW |
5 |
111,427,873 (GRCm39) |
missense |
probably damaging |
1.00 |
R7350:Ttc28
|
UTSW |
5 |
111,373,903 (GRCm39) |
missense |
probably damaging |
0.97 |
R7454:Ttc28
|
UTSW |
5 |
111,433,350 (GRCm39) |
missense |
probably benign |
0.19 |
R7461:Ttc28
|
UTSW |
5 |
111,371,995 (GRCm39) |
missense |
probably damaging |
1.00 |
R7596:Ttc28
|
UTSW |
5 |
111,427,990 (GRCm39) |
missense |
probably damaging |
1.00 |
R7613:Ttc28
|
UTSW |
5 |
111,371,995 (GRCm39) |
missense |
probably damaging |
1.00 |
R7625:Ttc28
|
UTSW |
5 |
111,433,085 (GRCm39) |
missense |
possibly damaging |
0.65 |
R7648:Ttc28
|
UTSW |
5 |
111,331,258 (GRCm39) |
missense |
possibly damaging |
0.52 |
R7735:Ttc28
|
UTSW |
5 |
111,414,544 (GRCm39) |
splice site |
probably null |
|
R8030:Ttc28
|
UTSW |
5 |
111,433,922 (GRCm39) |
missense |
possibly damaging |
0.81 |
R8205:Ttc28
|
UTSW |
5 |
111,373,596 (GRCm39) |
missense |
possibly damaging |
0.95 |
R8246:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8247:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8269:Ttc28
|
UTSW |
5 |
111,425,325 (GRCm39) |
missense |
probably benign |
0.09 |
R8292:Ttc28
|
UTSW |
5 |
111,371,123 (GRCm39) |
missense |
probably damaging |
1.00 |
R8346:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8356:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8423:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8424:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8426:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8441:Ttc28
|
UTSW |
5 |
111,325,507 (GRCm39) |
nonsense |
probably null |
|
R8494:Ttc28
|
UTSW |
5 |
111,383,506 (GRCm39) |
missense |
probably damaging |
0.96 |
R8508:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8510:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8729:Ttc28
|
UTSW |
5 |
111,383,509 (GRCm39) |
critical splice donor site |
probably null |
|
R8845:Ttc28
|
UTSW |
5 |
111,372,041 (GRCm39) |
missense |
probably benign |
0.11 |
R9003:Ttc28
|
UTSW |
5 |
111,424,896 (GRCm39) |
missense |
probably benign |
0.00 |
R9185:Ttc28
|
UTSW |
5 |
111,371,342 (GRCm39) |
missense |
probably benign |
0.03 |
R9187:Ttc28
|
UTSW |
5 |
111,249,902 (GRCm39) |
missense |
probably damaging |
1.00 |
R9245:Ttc28
|
UTSW |
5 |
111,325,525 (GRCm39) |
missense |
unknown |
|
R9251:Ttc28
|
UTSW |
5 |
111,040,698 (GRCm39) |
missense |
possibly damaging |
0.47 |
R9372:Ttc28
|
UTSW |
5 |
111,331,073 (GRCm39) |
missense |
probably benign |
0.25 |
R9466:Ttc28
|
UTSW |
5 |
111,330,895 (GRCm39) |
missense |
probably damaging |
0.99 |
R9563:Ttc28
|
UTSW |
5 |
111,371,092 (GRCm39) |
missense |
probably benign |
0.22 |
R9606:Ttc28
|
UTSW |
5 |
111,433,140 (GRCm39) |
missense |
probably benign |
0.00 |
R9691:Ttc28
|
UTSW |
5 |
111,431,879 (GRCm39) |
missense |
probably benign |
0.01 |
R9709:Ttc28
|
UTSW |
5 |
111,433,637 (GRCm39) |
missense |
probably damaging |
0.97 |
V8831:Ttc28
|
UTSW |
5 |
111,248,578 (GRCm39) |
missense |
probably benign |
0.11 |
Z1088:Ttc28
|
UTSW |
5 |
111,434,181 (GRCm39) |
missense |
probably benign |
0.00 |
Z1176:Ttc28
|
UTSW |
5 |
111,414,432 (GRCm39) |
missense |
possibly damaging |
0.59 |
Z1177:Ttc28
|
UTSW |
5 |
111,433,605 (GRCm39) |
missense |
probably benign |
0.10 |
Z1177:Ttc28
|
UTSW |
5 |
111,426,452 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- GCACCTGCACAGAGTGATCTCATTG -3'
(R):5'- TGATAGACCACAGCCCTCTCGAAG -3'
Sequencing Primer
(F):5'- AGAGTGATCTCATTGCTTCTCTG -3'
(R):5'- ACTCGTAGGTGAGTCCCAG -3'
|
Posted On |
2014-03-14 |