Mutagenetix > Incidental Mutation

Incidental Mutation 'R1532:Ccar2'

166687

Institutional Source

Beutler Lab

Gene Symbol

Ccar2

Ensembl Gene

ENSMUSG00000033712

Gene Name

cell cycle activator and apoptosis regulator 2

Synonyms

Dbc1, 2610301G19Rik

MMRRC Submission

039571-MU

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.522) question?

Stock #

R1532 (G1)

Quality Score

129

Status

Not validated

Chromosome

Chromosomal Location

70375613-70391260 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 70380405 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 392 (T392A)

Ref Sequence

ENSEMBL: ENSMUSP00000036924 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000022680] [ENSMUST00000035612]

AlphaFold

Q8VDP4

Predicted Effect

probably benign
Transcript: ENSMUST00000022680

SMART Domains

Protein: ENSMUSP00000022680
Gene: ENSMUSG00000022089

Domain	Start	End	E-Value	Type
BAR	5	225	2.05e-55	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000035612
AA Change: T392A

PolyPhen 2 Score 0.008 (Sensitivity: 0.96; Specificity: 0.76)

SMART Domains

Protein: ENSMUSP00000036924
Gene: ENSMUSG00000033712
AA Change: T392A

Domain	Start	End	E-Value	Type
low complexity region	23	37	N/A	INTRINSIC
Pfam:S1-like	55	112	1.3e-29	PFAM
DBC1	339	462	8.48e-73	SMART
low complexity region	496	507	N/A	INTRINSIC
low complexity region	534	545	N/A	INTRINSIC
low complexity region	563	601	N/A	INTRINSIC
low complexity region	627	640	N/A	INTRINSIC
low complexity region	647	660	N/A	INTRINSIC
SCOP:d2mysb_	703	747	2e-3	SMART
Blast:HDc	704	758	7e-7	BLAST
coiled coil region	828	898	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000227589

Coding Region Coverage

1x: 99.1%
3x: 98.2%
10x: 96.0%
20x: 91.9%

Validation Efficiency

MGI Phenotype

PHENOTYPE: Homozygous null mice on a high fat diet are resistant to hepatic steatosis and associated liver inflammation. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 74 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adamtsl1	C	A	4: 86,166,302 (GRCm39)	H394N	probably benign	Het
Ahrr	A	G	13: 74,361,826 (GRCm39)	S558P	probably benign	Het
Ankrd26	T	C	6: 118,499,919 (GRCm39)	N1184S	probably damaging	Het
Anpep	A	T	7: 79,476,696 (GRCm39)	C14*	probably null	Het
Arhgap18	A	G	10: 26,736,718 (GRCm39)	D187G	possibly damaging	Het
Arhgef5	A	G	6: 43,250,337 (GRCm39)	T363A	probably benign	Het
Atxn1	A	T	13: 45,720,386 (GRCm39)	L503Q	possibly damaging	Het
Babam1	A	G	8: 71,852,277 (GRCm39)	D155G	possibly damaging	Het
Bbs9	A	G	9: 22,798,945 (GRCm39)	T858A	probably benign	Het
Cacna1g	C	A	11: 94,334,157 (GRCm39)	G828V	probably damaging	Het
Cd163	T	C	6: 124,289,689 (GRCm39)	V469A	possibly damaging	Het
Cdh23	G	T	10: 60,150,110 (GRCm39)	N2576K	probably damaging	Het
Coro2b	A	G	9: 62,396,705 (GRCm39)	Y18H	probably damaging	Het
Crispld2	G	T	8: 120,750,311 (GRCm39)	K238N	probably benign	Het
Ctnnd2	T	C	15: 30,922,014 (GRCm39)	I880T	probably damaging	Het
Cubn	C	A	2: 13,292,472 (GRCm39)	C3237F	probably damaging	Het
Ddx31	A	G	2: 28,771,171 (GRCm39)	M519V	probably benign	Het
Dhx32	A	T	7: 133,350,753 (GRCm39)	C106S	possibly damaging	Het
Diaph1	A	G	18: 38,029,146 (GRCm39)		probably null	Het
Dnaaf1	T	C	8: 120,304,162 (GRCm39)	F67L	probably benign	Het
Duox1	T	G	2: 122,175,204 (GRCm39)	L1334R	probably damaging	Het
Dync1li2	A	T	8: 105,152,667 (GRCm39)	I322N	probably damaging	Het
Eml6	T	C	11: 29,742,256 (GRCm39)		probably null	Het
Entpd6	A	G	2: 150,600,670 (GRCm39)	Q126R	probably benign	Het
Entpd7	C	G	19: 43,679,516 (GRCm39)	P23R	possibly damaging	Het
Epha3	T	C	16: 63,366,541 (GRCm39)	I970V	probably benign	Het
Fras1	A	T	5: 96,861,855 (GRCm39)	H2163L	probably damaging	Het
Gse1	C	G	8: 121,294,949 (GRCm39)		probably benign	Het
Heatr5a	A	G	12: 51,999,301 (GRCm39)	V300A	probably damaging	Het
Hsd3b1	T	A	3: 98,760,214 (GRCm39)	D259V	probably damaging	Het
Hspbap1	T	C	16: 35,645,673 (GRCm39)	S453P	probably damaging	Het
Ifnl3	A	G	7: 28,223,652 (GRCm39)	T163A	probably benign	Het
Igbp1b	T	A	6: 138,635,442 (GRCm39)	M1L	possibly damaging	Het
Klra3	G	C	6: 130,310,107 (GRCm39)	R138G	probably benign	Het
Lpxn	T	C	19: 12,781,456 (GRCm39)		probably null	Het
Mast1	G	A	8: 85,655,238 (GRCm39)	Q249*	probably null	Het
Mink1	A	G	11: 70,492,833 (GRCm39)	D153G	probably null	Het
Mllt10	G	A	2: 18,097,646 (GRCm39)		probably null	Het
Mpl	C	T	4: 118,305,765 (GRCm39)	G420E	possibly damaging	Het
Ms4a1	T	A	19: 11,230,557 (GRCm39)	T215S	probably benign	Het
Ncapd3	C	T	9: 26,994,656 (GRCm39)	Q1179*	probably null	Het
Nr3c2	A	G	8: 77,635,733 (GRCm39)	H278R	probably damaging	Het
Or10v5	T	C	19: 11,805,983 (GRCm39)	I136V	probably benign	Het
Or52e18	T	C	7: 104,609,472 (GRCm39)	I156V	probably benign	Het
Or5b102	A	G	19: 13,041,639 (GRCm39)	Y288C	probably damaging	Het
Os9	C	T	10: 126,934,771 (GRCm39)	V353M	probably damaging	Het
Osbpl5	A	T	7: 143,248,817 (GRCm39)	M589K	probably benign	Het
Phf20	G	T	2: 156,144,969 (GRCm39)	G859V	possibly damaging	Het
Pkhd1	G	A	1: 20,187,625 (GRCm39)	T3561I	probably benign	Het
Prss46	G	A	9: 110,679,236 (GRCm39)	V146I	probably benign	Het
Ptprk	G	A	10: 28,461,626 (GRCm39)	V1139M	probably damaging	Het
Ranbp10	A	G	8: 106,500,963 (GRCm39)	L396P	probably benign	Het
Rb1cc1	A	G	1: 6,319,958 (GRCm39)	T1126A	probably benign	Het
Rbl2	G	A	8: 91,833,045 (GRCm39)	A659T	probably benign	Het
Rdm1	T	C	11: 101,524,643 (GRCm39)	L192P	probably damaging	Het
Reln	A	C	5: 22,239,742 (GRCm39)	W842G	probably damaging	Het
Scn5a	C	T	9: 119,362,913 (GRCm39)	R569H	probably damaging	Het
Sele	A	G	1: 163,881,420 (GRCm39)	K509R	probably benign	Het
Slc15a1	A	T	14: 121,713,396 (GRCm39)	I377N	possibly damaging	Het
Slc17a3	G	A	13: 24,040,483 (GRCm39)	G269D	probably damaging	Het
Slc35a5	T	C	16: 44,971,920 (GRCm39)	T115A	probably benign	Het
Slc5a12	T	G	2: 110,440,483 (GRCm39)	N157K	possibly damaging	Het
Sphkap	A	G	1: 83,234,924 (GRCm39)	V1634A	probably damaging	Het
Spta1	T	C	1: 174,074,919 (GRCm39)	S2382P	probably damaging	Het
Synj2	C	A	17: 6,084,194 (GRCm39)	S1100R	probably benign	Het
Tcf23	A	G	5: 31,130,901 (GRCm39)	T180A	probably benign	Het
Tnxb	T	C	17: 34,929,804 (GRCm39)	V2846A	probably damaging	Het
Tpr	T	A	1: 150,293,751 (GRCm39)	I915K	probably damaging	Het
Uba1y	C	T	Y: 828,862 (GRCm39)	H557Y	probably benign	Het
Unc45b	T	A	11: 82,827,700 (GRCm39)	D730E	probably benign	Het
Unc5b	A	T	10: 60,605,011 (GRCm39)	L734Q	probably damaging	Het
Vmn1r167	G	T	7: 23,204,204 (GRCm39)	H271N	probably benign	Het
Vmn2r76	A	G	7: 85,879,454 (GRCm39)	V282A	probably benign	Het
Xirp2	A	G	2: 67,344,283 (GRCm39)	K2175E	probably benign	Het

Other mutations in Ccar2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00503:Ccar2	APN	14	70,379,980 (GRCm39)	nonsense	probably null
IGL01351:Ccar2	APN	14	70,383,311 (GRCm39)	missense	probably benign	0.03
IGL01450:Ccar2	APN	14	70,377,200 (GRCm39)	splice site	probably benign
IGL02306:Ccar2	APN	14	70,379,471 (GRCm39)	missense	probably benign	0.01
IGL03403:Ccar2	APN	14	70,377,517 (GRCm39)	missense	probably damaging	1.00
R0332:Ccar2	UTSW	14	70,379,384 (GRCm39)	splice site	probably benign
R0502:Ccar2	UTSW	14	70,378,431 (GRCm39)	missense	probably benign	0.00
R0827:Ccar2	UTSW	14	70,377,287 (GRCm39)	missense	probably benign	0.00
R1022:Ccar2	UTSW	14	70,377,964 (GRCm39)	missense	probably damaging	1.00
R1024:Ccar2	UTSW	14	70,377,964 (GRCm39)	missense	probably damaging	1.00
R1160:Ccar2	UTSW	14	70,377,218 (GRCm39)	missense	probably benign	0.42
R1258:Ccar2	UTSW	14	70,390,122 (GRCm39)	missense	probably benign	0.24
R1389:Ccar2	UTSW	14	70,377,558 (GRCm39)	missense	possibly damaging	0.46
R1870:Ccar2	UTSW	14	70,377,946 (GRCm39)	missense	probably damaging	1.00
R2127:Ccar2	UTSW	14	70,377,100 (GRCm39)	missense	probably benign	0.33
R4233:Ccar2	UTSW	14	70,388,540 (GRCm39)	missense	possibly damaging	0.76
R4569:Ccar2	UTSW	14	70,389,359 (GRCm39)	splice site	probably null
R4799:Ccar2	UTSW	14	70,377,003 (GRCm39)	missense	probably damaging	0.99
R5026:Ccar2	UTSW	14	70,379,951 (GRCm39)	missense	possibly damaging	0.89
R5435:Ccar2	UTSW	14	70,376,776 (GRCm39)	missense	probably damaging	1.00
R5893:Ccar2	UTSW	14	70,388,800 (GRCm39)	missense	probably benign	0.28
R6446:Ccar2	UTSW	14	70,380,518 (GRCm39)	missense	probably benign	0.31
R6594:Ccar2	UTSW	14	70,377,925 (GRCm39)	missense	probably damaging	1.00
R6648:Ccar2	UTSW	14	70,376,674 (GRCm39)	missense	probably benign	0.29
R7103:Ccar2	UTSW	14	70,379,426 (GRCm39)	missense	probably damaging	0.99
R7594:Ccar2	UTSW	14	70,379,243 (GRCm39)	nonsense	probably null
R7679:Ccar2	UTSW	14	70,376,684 (GRCm39)	nonsense	probably null
R7975:Ccar2	UTSW	14	70,380,918 (GRCm39)	missense	possibly damaging	0.51
R8071:Ccar2	UTSW	14	70,389,902 (GRCm39)	missense	probably benign	0.26
R9360:Ccar2	UTSW	14	70,379,445 (GRCm39)	missense	probably damaging	1.00
R9574:Ccar2	UTSW	14	70,381,105 (GRCm39)	missense	probably benign	0.01
R9631:Ccar2	UTSW	14	70,389,344 (GRCm39)	missense	probably damaging	1.00
R9705:Ccar2	UTSW	14	70,380,383 (GRCm39)	missense	probably damaging	1.00
R9749:Ccar2	UTSW	14	70,388,728 (GRCm39)	missense	probably benign	0.28
V5088:Ccar2	UTSW	14	70,388,738 (GRCm39)	missense	probably damaging	0.99
V5622:Ccar2	UTSW	14	70,388,738 (GRCm39)	missense	probably damaging	0.99
V5622:Ccar2	UTSW	14	70,388,738 (GRCm39)	missense	probably damaging	0.99

Predicted Primers

PCR Primer
(F):5'- TTCCAGTCAGCACTCCATGCAC -3'
(R):5'- GACGCAGGCCATGTTTCGTTATTC -3'

Sequencing Primer
(F):5'- AAGCCTCTGTGGTTAGGCAAC -3'
(R):5'- GGCCATGTTTCGTTATTCCCAATC -3'

Posted On

2014-04-13