Mutagenetix > Incidental Mutation

Incidental Mutation 'R1514:Taar4'

168628

Institutional Source

Beutler Lab

Gene Symbol

Taar4

Ensembl Gene

ENSMUSG00000069707

Gene Name

trace amine-associated receptor 4

Synonyms

MMRRC Submission

039561-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.113) question?

Stock #

R1514 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

23960494-23961537 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 23960612 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Methionine to Lysine at position 40 (M40K)

Ref Sequence

ENSEMBL: ENSMUSP00000090330 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000092660]

AlphaFold

Q5QD15

Predicted Effect

possibly damaging
Transcript: ENSMUST00000092660
AA Change: M40K

PolyPhen 2 Score 0.708 (Sensitivity: 0.86; Specificity: 0.92)

SMART Domains

Protein: ENSMUSP00000090330
Gene: ENSMUSG00000069707
AA Change: M40K

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srsx	44	328	9.2e-11	PFAM
Pfam:7tm_1	50	313	4.6e-63	PFAM

Meta Mutation Damage Score

0.1795

Coding Region Coverage

1x: 99.4%
3x: 98.7%
10x: 97.4%
20x: 95.6%

Validation Efficiency

100% (65/65)

MGI Phenotype

PHENOTYPE: Mice homozygous for a knock-out allele exhibit impaired olfactory response and aversion to PEA and puma urine. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 66 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700017N19Rik	T	A	10: 100,612,867 (GRCm38)	L147Q	probably damaging	Het
Abcb1a	A	G	5: 8,674,791 (GRCm38)	T75A	possibly damaging	Het
Acvr1	A	T	2: 58,447,585 (GRCm38)	L495*	probably null	Het
Add1	T	C	5: 34,610,617 (GRCm38)	I240T	probably benign	Het
Adgra2	C	A	8: 27,121,278 (GRCm38)	S870*	probably null	Het
Amer3	G	A	1: 34,579,327 (GRCm38)		probably benign	Het
Baz2b	A	T	2: 59,962,326 (GRCm38)	V486D	probably benign	Het
Bcorl1	T	A	X: 48,405,944 (GRCm38)	D1697E	probably damaging	Het
Cenpf	T	C	1: 189,679,141 (GRCm38)	D282G	possibly damaging	Het
Cep112	A	G	11: 108,472,054 (GRCm38)	D200G	probably damaging	Het
Clec4a4	C	T	6: 122,990,442 (GRCm38)	P26S	probably benign	Het
Crygf	A	C	1: 65,928,038 (GRCm38)	R102S	possibly damaging	Het
Cyp2b19	A	T	7: 26,767,160 (GRCm38)	E404D	probably benign	Het
Dcdc2a	A	G	13: 25,061,254 (GRCm38)	I105V	probably benign	Het
Dus4l	T	C	12: 31,640,939 (GRCm38)	M238V	probably damaging	Het
Eprs	G	A	1: 185,381,834 (GRCm38)	M326I	probably damaging	Het
Evpl	T	C	11: 116,223,835 (GRCm38)	T1010A	probably benign	Het
Fam124b	T	C	1: 80,200,431 (GRCm38)	T284A	possibly damaging	Het
Fam84a	C	T	12: 14,149,863 (GRCm38)	V288M	probably damaging	Het
Glb1l2	A	G	9: 26,769,124 (GRCm38)		probably benign	Het
Gm15922	G	A	7: 3,739,640 (GRCm38)	T23I	possibly damaging	Het
Gm16223	T	A	5: 42,067,955 (GRCm38)		probably null	Het
Gm438	T	C	4: 144,777,759 (GRCm38)	N274S	probably damaging	Het
Gm4952	T	A	19: 12,626,914 (GRCm38)	M230K	probably damaging	Het
Gm5828	C	A	1: 16,769,359 (GRCm38)		noncoding transcript	Het
Gm597	T	A	1: 28,778,748 (GRCm38)	T68S	possibly damaging	Het
Hsh2d	G	A	8: 72,200,460 (GRCm38)	D229N	probably benign	Het
Ifna16	T	A	4: 88,676,742 (GRCm38)	T39S	possibly damaging	Het
Kcnc3	G	A	7: 44,595,603 (GRCm38)	G439D	probably damaging	Het
Kif1c	T	C	11: 70,705,729 (GRCm38)	S257P	probably damaging	Het
Kng1	A	G	16: 23,079,760 (GRCm38)	K456E	probably damaging	Het
Lpxn	T	C	19: 12,824,050 (GRCm38)	L142P	probably damaging	Het
Med23	A	G	10: 24,892,667 (GRCm38)		probably benign	Het
Mgea5	A	G	19: 45,776,931 (GRCm38)	S146P	probably damaging	Het
Mks1	A	T	11: 87,861,111 (GRCm38)	D369V	probably benign	Het
Myo1d	A	T	11: 80,685,908 (GRCm38)	Y114N	probably damaging	Het
Npas2	A	G	1: 39,311,854 (GRCm38)	D126G	possibly damaging	Het
Olfr1314	T	C	2: 112,092,036 (GRCm38)	I222V	probably benign	Het
Olfr1420	A	G	19: 11,896,614 (GRCm38)	T198A	probably benign	Het
Olfr148	T	C	9: 39,613,696 (GRCm38)	I43T	probably damaging	Het
Onecut2	T	C	18: 64,341,580 (GRCm38)	F401L	possibly damaging	Het
Parp11	T	A	6: 127,474,293 (GRCm38)	F102Y	possibly damaging	Het
Pcnx	C	T	12: 81,918,798 (GRCm38)	H580Y	probably damaging	Het
Pde3b	A	G	7: 114,530,766 (GRCm38)	H852R	probably damaging	Het
Pou2af1	A	G	9: 51,233,208 (GRCm38)	T141A	probably benign	Het
Rgs22	A	C	15: 36,013,100 (GRCm38)	V1190G	probably benign	Het
Rnf112	T	C	11: 61,450,410 (GRCm38)	S450G	probably benign	Het
Rpgrip1l	A	T	8: 91,260,750 (GRCm38)	I893N	probably damaging	Het
Rps3a1	A	G	3: 86,138,527 (GRCm38)	V210A	probably benign	Het
Runx2	C	T	17: 44,735,337 (GRCm38)	A114T	possibly damaging	Het
Sardh	A	G	2: 27,197,690 (GRCm38)	V723A	possibly damaging	Het
Sdk2	C	T	11: 113,838,646 (GRCm38)		silent	Het
Secisbp2	A	G	13: 51,682,095 (GRCm38)	S742G	possibly damaging	Het
Selenow	G	T	7: 15,920,298 (GRCm38)		probably benign	Het
Slc30a4	A	G	2: 122,689,414 (GRCm38)	V226A	probably damaging	Het
Sntb2	A	G	8: 106,991,532 (GRCm38)	N291D	probably damaging	Het
Sorbs2	A	G	8: 45,769,829 (GRCm38)	T190A	probably damaging	Het
Specc1	T	A	11: 62,156,532 (GRCm38)	L909H	probably damaging	Het
Sprr1b	T	C	3: 92,437,107 (GRCm38)	*154W	probably null	Het
Ubr2	A	T	17: 47,000,823 (GRCm38)	L34H	probably damaging	Het
Ubxn6	T	C	17: 56,069,003 (GRCm38)	K386R	probably benign	Het
Vmn2r112	A	T	17: 22,602,844 (GRCm38)	T168S	probably benign	Het
Xirp2	A	T	2: 67,514,323 (GRCm38)	R2303*	probably null	Het
Zbtb14	C	A	17: 69,388,502 (GRCm38)	F398L	probably damaging	Het
Zfp13	G	T	17: 23,576,412 (GRCm38)	T395K	probably damaging	Het
Zfp281	A	G	1: 136,626,697 (GRCm38)	N471S	probably benign	Het

Other mutations in Taar4

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02576:Taar4	APN	10	23,961,011 (GRCm38)	missense	probably damaging	1.00
IGL03202:Taar4	APN	10	23,960,794 (GRCm38)	missense	probably damaging	1.00
I2288:Taar4	UTSW	10	23,960,920 (GRCm38)	missense	probably benign	0.03
R0103:Taar4	UTSW	10	23,961,406 (GRCm38)	missense	probably damaging	1.00
R0103:Taar4	UTSW	10	23,961,406 (GRCm38)	missense	probably damaging	1.00
R0514:Taar4	UTSW	10	23,960,882 (GRCm38)	missense	probably damaging	1.00
R1222:Taar4	UTSW	10	23,961,332 (GRCm38)	missense	probably benign	0.05
R1248:Taar4	UTSW	10	23,961,038 (GRCm38)	missense	possibly damaging	0.95
R1921:Taar4	UTSW	10	23,961,341 (GRCm38)	missense	probably damaging	1.00
R2074:Taar4	UTSW	10	23,961,173 (GRCm38)	missense	probably benign	0.18
R2354:Taar4	UTSW	10	23,961,014 (GRCm38)	missense	probably damaging	1.00
R2392:Taar4	UTSW	10	23,961,274 (GRCm38)	missense	possibly damaging	0.94
R2698:Taar4	UTSW	10	23,961,430 (GRCm38)	missense	probably damaging	1.00
R3902:Taar4	UTSW	10	23,961,015 (GRCm38)	missense	probably damaging	1.00
R4688:Taar4	UTSW	10	23,960,833 (GRCm38)	missense	probably damaging	1.00
R5495:Taar4	UTSW	10	23,961,283 (GRCm38)	missense	possibly damaging	0.95
R5595:Taar4	UTSW	10	23,960,741 (GRCm38)	missense	probably damaging	1.00
R5773:Taar4	UTSW	10	23,961,158 (GRCm38)	missense	probably damaging	1.00
R7403:Taar4	UTSW	10	23,961,059 (GRCm38)	missense	probably damaging	1.00
R7581:Taar4	UTSW	10	23,961,154 (GRCm38)	missense	probably damaging	0.97
R7736:Taar4	UTSW	10	23,960,999 (GRCm38)	missense	probably damaging	1.00
R7859:Taar4	UTSW	10	23,961,134 (GRCm38)	missense	probably benign	0.35
R8676:Taar4	UTSW	10	23,960,903 (GRCm38)	missense	possibly damaging	0.56

Predicted Primers

PCR Primer
(F):5'- TGCCCTGCCAATGATTTTATGGCTC -3'
(R):5'- CCGAAGTACCAGCATGACTCGATG -3'

Sequencing Primer
(F):5'- TTCTTTCACAGACAGGATCACAG -3'
(R):5'- TCGATGGACCGGATCATACTG -3'

Posted On

2014-04-13