Incidental Mutation 'R1505:Ap2m1'
ID |
169138 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Ap2m1
|
Ensembl Gene |
ENSMUSG00000022841 |
Gene Name |
adaptor-related protein complex 2, mu 1 subunit |
Synonyms |
clathrin-associated AP-2 |
MMRRC Submission |
040868-MU
|
Accession Numbers |
|
Essential gene? |
Essential
(E-score: 1.000)
|
Stock # |
R1505 (G1)
|
Quality Score |
178 |
Status
|
Not validated
|
Chromosome |
16 |
Chromosomal Location |
20354230-20363659 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
C to G
at 20361447 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Proline to Alanine
at position 372
(P372A)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000087477
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000007216]
[ENSMUST00000090023]
[ENSMUST00000126788]
[ENSMUST00000232001]
|
AlphaFold |
P84091 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000007216
AA Change: P374A
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000007216 Gene: ENSMUSG00000022841 AA Change: P374A
Domain | Start | End | E-Value | Type |
Pfam:Clat_adaptor_s
|
1 |
137 |
6.7e-8 |
PFAM |
Pfam:Adap_comp_sub
|
159 |
435 |
3.2e-84 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000090023
AA Change: P372A
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000087477 Gene: ENSMUSG00000022841 AA Change: P372A
Domain | Start | End | E-Value | Type |
Pfam:Clat_adaptor_s
|
1 |
137 |
4.2e-8 |
PFAM |
Pfam:Adap_comp_sub
|
157 |
433 |
8.7e-87 |
PFAM |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000119553
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000126788
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000131203
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000133443
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000134981
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000150986
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000150537
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000148507
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000135420
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000232001
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000231978
|
Coding Region Coverage |
- 1x: 98.9%
- 3x: 97.8%
- 10x: 94.5%
- 20x: 86.3%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: This gene encodes the mu subunit of the clathrin adaptor protein complex AP-2. It mediates sorting of cargo proteins harboring Y-X-X-Phi motifs into clathrin-coated vesicles. Alternate splicing of this gene results in multiple transcript variants. Pseudogenes of this gene are found on chromosomes 2, 8 and 19. [provided by RefSeq, Dec 2014] PHENOTYPE: Mice homozygous for a targeted deletion display embryonic lethality before implantation. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 46 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abcg3 |
T |
A |
5: 105,099,431 (GRCm39) |
R444W |
probably damaging |
Het |
Adnp |
A |
G |
2: 168,025,661 (GRCm39) |
S545P |
possibly damaging |
Het |
Ankrd17 |
T |
C |
5: 90,447,885 (GRCm39) |
R219G |
possibly damaging |
Het |
Calml3 |
T |
A |
13: 3,854,071 (GRCm39) |
T45S |
probably benign |
Het |
Casp8 |
A |
G |
1: 58,868,081 (GRCm39) |
E174G |
probably damaging |
Het |
Ces4a |
G |
A |
8: 105,864,729 (GRCm39) |
G69S |
probably damaging |
Het |
Cfap221 |
A |
C |
1: 119,881,358 (GRCm39) |
L368R |
probably benign |
Het |
Chd9 |
A |
G |
8: 91,733,123 (GRCm39) |
|
probably null |
Het |
Cnot1 |
A |
T |
8: 96,455,295 (GRCm39) |
I2035N |
probably damaging |
Het |
Cyp2c67 |
T |
C |
19: 39,637,408 (GRCm39) |
R23G |
probably benign |
Het |
Dnah10 |
A |
C |
5: 124,831,303 (GRCm39) |
H777P |
possibly damaging |
Het |
Fabp3 |
C |
T |
4: 130,206,180 (GRCm39) |
T57I |
probably benign |
Het |
Fam162b |
G |
A |
10: 51,463,298 (GRCm39) |
A123V |
probably damaging |
Het |
Golgb1 |
T |
A |
16: 36,740,005 (GRCm39) |
N2781K |
possibly damaging |
Het |
Hs2st1 |
C |
A |
3: 144,140,322 (GRCm39) |
R333L |
probably benign |
Het |
Kmt2e |
A |
G |
5: 23,705,533 (GRCm39) |
H1319R |
probably null |
Het |
Necab1 |
A |
T |
4: 14,960,047 (GRCm39) |
M300K |
probably benign |
Het |
Ntrk3 |
T |
A |
7: 78,110,272 (GRCm39) |
I321F |
probably damaging |
Het |
Or5p60 |
A |
G |
7: 107,724,200 (GRCm39) |
V90A |
probably benign |
Het |
Or7e169 |
A |
T |
9: 19,757,084 (GRCm39) |
M277K |
probably benign |
Het |
Or8g52 |
A |
G |
9: 39,630,774 (GRCm39) |
N84D |
probably damaging |
Het |
Or8k41 |
A |
T |
2: 86,313,557 (GRCm39) |
H176Q |
possibly damaging |
Het |
Osbpl6 |
T |
C |
2: 76,409,586 (GRCm39) |
S483P |
probably damaging |
Het |
Pcdhb17 |
A |
C |
18: 37,619,875 (GRCm39) |
N555T |
probably damaging |
Het |
Pdgfc |
G |
A |
3: 81,116,543 (GRCm39) |
R299H |
possibly damaging |
Het |
Ptpn7 |
A |
T |
1: 135,062,302 (GRCm39) |
T83S |
probably benign |
Het |
Rapgef5 |
T |
C |
12: 117,652,354 (GRCm39) |
V79A |
possibly damaging |
Het |
Rexo5 |
T |
A |
7: 119,398,826 (GRCm39) |
C54* |
probably null |
Het |
Riok3 |
A |
G |
18: 12,285,935 (GRCm39) |
K418R |
probably benign |
Het |
Robo4 |
G |
A |
9: 37,314,523 (GRCm39) |
G170D |
probably damaging |
Het |
Rpl8 |
A |
G |
15: 76,788,610 (GRCm39) |
D33G |
possibly damaging |
Het |
Rspo2 |
T |
C |
15: 42,939,239 (GRCm39) |
T184A |
probably damaging |
Het |
Ryr2 |
A |
T |
13: 11,569,478 (GRCm39) |
M4942K |
possibly damaging |
Het |
Sel1l |
T |
C |
12: 91,780,736 (GRCm39) |
Y585C |
probably damaging |
Het |
Slc25a11 |
G |
T |
11: 70,537,650 (GRCm39) |
D13E |
probably benign |
Het |
Slc5a6 |
G |
T |
5: 31,194,455 (GRCm39) |
H584N |
probably benign |
Het |
Snrpf |
A |
G |
10: 93,419,381 (GRCm39) |
V69A |
possibly damaging |
Het |
Sorbs3 |
T |
A |
14: 70,428,251 (GRCm39) |
K475* |
probably null |
Het |
Speg |
G |
A |
1: 75,352,186 (GRCm39) |
V35I |
probably benign |
Het |
Tlk2 |
T |
G |
11: 105,151,121 (GRCm39) |
V468G |
probably damaging |
Het |
Trim6 |
T |
A |
7: 103,881,771 (GRCm39) |
W341R |
probably damaging |
Het |
Ttll5 |
T |
A |
12: 85,926,184 (GRCm39) |
I326N |
probably damaging |
Het |
Vipas39 |
T |
C |
12: 87,292,934 (GRCm39) |
Y318C |
probably damaging |
Het |
Vmn1r185 |
T |
A |
7: 26,310,903 (GRCm39) |
I201F |
probably damaging |
Het |
Vwce |
A |
G |
19: 10,641,608 (GRCm39) |
H778R |
probably benign |
Het |
Zbtb14 |
C |
G |
17: 69,694,759 (GRCm39) |
I152M |
probably benign |
Het |
|
Other mutations in Ap2m1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01718:Ap2m1
|
APN |
16 |
20,360,944 (GRCm39) |
unclassified |
probably benign |
|
R0110:Ap2m1
|
UTSW |
16 |
20,360,990 (GRCm39) |
missense |
possibly damaging |
0.67 |
R0390:Ap2m1
|
UTSW |
16 |
20,359,849 (GRCm39) |
missense |
probably damaging |
0.98 |
R0450:Ap2m1
|
UTSW |
16 |
20,360,990 (GRCm39) |
missense |
possibly damaging |
0.67 |
R0510:Ap2m1
|
UTSW |
16 |
20,360,990 (GRCm39) |
missense |
possibly damaging |
0.67 |
R1386:Ap2m1
|
UTSW |
16 |
20,359,979 (GRCm39) |
missense |
probably damaging |
1.00 |
R1728:Ap2m1
|
UTSW |
16 |
20,358,088 (GRCm39) |
missense |
probably damaging |
0.99 |
R1729:Ap2m1
|
UTSW |
16 |
20,358,088 (GRCm39) |
missense |
probably damaging |
0.99 |
R4433:Ap2m1
|
UTSW |
16 |
20,362,134 (GRCm39) |
missense |
possibly damaging |
0.55 |
R5773:Ap2m1
|
UTSW |
16 |
20,362,140 (GRCm39) |
missense |
probably damaging |
0.96 |
R6953:Ap2m1
|
UTSW |
16 |
20,361,468 (GRCm39) |
missense |
probably damaging |
0.96 |
R7226:Ap2m1
|
UTSW |
16 |
20,358,201 (GRCm39) |
missense |
probably damaging |
0.99 |
R7266:Ap2m1
|
UTSW |
16 |
20,362,095 (GRCm39) |
missense |
probably damaging |
1.00 |
R7735:Ap2m1
|
UTSW |
16 |
20,358,269 (GRCm39) |
missense |
probably benign |
0.01 |
R9571:Ap2m1
|
UTSW |
16 |
20,360,037 (GRCm39) |
missense |
probably damaging |
1.00 |
R9777:Ap2m1
|
UTSW |
16 |
20,358,113 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TCTAAAGCGTACAGTCTGGGTGAGG -3'
(R):5'- TCAGGACACATCTGAAGCTGAGCC -3'
Sequencing Primer
(F):5'- TCTGGGTGAGGGAGAAACTG -3'
(R):5'- AATCCTTAGGTTGCCAGAGC -3'
|
Posted On |
2014-04-13 |