Mutagenetix > Incidental Mutations

Incidental Mutation 'R0067:Ticrr'

17013

Institutional Source

Beutler Lab

Gene Symbol

Ticrr

Ensembl Gene

ENSMUSG00000046591

Gene Name

TOPBP1-interacting checkpoint and replication regulator

Synonyms

5730590G19Rik

MMRRC Submission

038358-MU

Accession Numbers

Is this an essential gene?

Probably essential (E-score: 0.958) question?

Stock #

R0067 (G1)

Quality Score

Status

Validated

Chromosome

Chromosomal Location

79660196-79698148 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 79677410 bp

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Valine at position 622 (D622V)

Ref Sequence

ENSEMBL: ENSMUSP00000041377 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000035977] [ENSMUST00000206017] [ENSMUST00000206591] [ENSMUST00000206622]

Predicted Effect

probably damaging
Transcript: ENSMUST00000035977
AA Change: D622V

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000041377
Gene: ENSMUSG00000046591
AA Change: D622V

Domain	Start	End	E-Value	Type
low complexity region	23	31	N/A	INTRINSIC
Pfam:Treslin_N	211	1005	N/A	PFAM
low complexity region	1186	1197	N/A	INTRINSIC
low complexity region	1220	1235	N/A	INTRINSIC
low complexity region	1339	1359	N/A	INTRINSIC
low complexity region	1472	1480	N/A	INTRINSIC
low complexity region	1496	1514	N/A	INTRINSIC
low complexity region	1630	1643	N/A	INTRINSIC
low complexity region	1694	1707	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000206017

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000206072

Predicted Effect

probably damaging
Transcript: ENSMUST00000206591
AA Change: D622V

PolyPhen 2 Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)

Predicted Effect

probably damaging
Transcript: ENSMUST00000206622
AA Change: D622V

PolyPhen 2 Score 0.988 (Sensitivity: 0.73; Specificity: 0.96)

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000206677

Meta Mutation Damage Score

0.0946

Coding Region Coverage

1x: 87.3%
3x: 82.3%
10x: 64.1%
20x: 35.8%

Validation Efficiency

96% (73/76)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Treslin is involved in the initiation of DNA replication (Kumagai et al., 2010 [PubMed 20116089]).[supplied by OMIM, Apr 2010]
PHENOTYPE: Mice homozygous for an ENU-induced allele are mostly hairless, with only a light patch of hair around the face and tail. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 40 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Actn4	C	T	7: 28,911,570	V248M	possibly damaging	Het
AW209491	A	T	13: 14,637,743	I394F	probably benign	Het
Cacna1d	A	T	14: 30,075,010		probably benign	Het
Cacna1i	A	T	15: 80,381,172	I1542F	probably damaging	Het
Cep97	A	T	16: 55,915,561	N291K	possibly damaging	Het
Clasp2	A	T	9: 113,860,141		probably benign	Het
Dennd1c	T	C	17: 57,075,465	Q67R	probably damaging	Het
Eva1c	A	T	16: 90,866,417	D13V	possibly damaging	Het
Fam151b	T	C	13: 92,473,996	K95R	probably benign	Het
Gm13941	T	C	2: 111,059,416		noncoding transcript	Het
Gps2	C	T	11: 69,914,781	Q42*	probably null	Het
Hivep1	T	A	13: 42,158,656	D1457E	probably benign	Het
L3mbtl1	A	G	2: 162,948,828	K225E	probably damaging	Het
Limch1	A	G	5: 66,974,622	S143G	probably damaging	Het
Macf1	T	C	4: 123,475,248	K342E	possibly damaging	Het
Mc5r	T	G	18: 68,339,566	M332R	probably damaging	Het
Mcf2l	A	G	8: 13,013,060	T882A	probably benign	Het
Myf6	A	T	10: 107,493,479		probably null	Het
Plekha5	C	T	6: 140,524,903	T90I	probably damaging	Het
Ptbp2	T	C	3: 119,720,641	T478A	probably benign	Het
Rasgrp1	C	A	2: 117,294,820	R246S	probably damaging	Het
Rflnb	A	T	11: 76,022,161	S134T	possibly damaging	Het
Rnf214	A	G	9: 45,867,498		probably null	Het
Satb1	T	C	17: 51,804,336	T165A	probably damaging	Het
Scamp1	T	C	13: 94,204,150	Y237C	probably damaging	Het
Skint10	A	T	4: 112,711,556	F321L	probably benign	Het
Skiv2l2	C	T	13: 112,886,862	V727I	probably benign	Het
Slc8a1	A	G	17: 81,437,759	V672A	probably benign	Het
Spats2	C	A	15: 99,212,287	P522T	possibly damaging	Het
Stkld1	A	T	2: 26,949,340	E339D	probably benign	Het
Tbc1d9	A	G	8: 83,234,243	T241A	probably damaging	Het
Trmt1l	T	C	1: 151,448,380	V326A	probably benign	Het
Ube3c	A	G	5: 29,598,938	T180A	possibly damaging	Het
Unc13a	A	C	8: 71,634,658	F1482V	probably damaging	Het
Unc79	A	G	12: 103,059,518	E388G	probably damaging	Het
Ush2a	A	T	1: 188,964,846	D5167V	probably damaging	Het
Vmn2r93	A	T	17: 18,326,410	H848L	probably benign	Het
Zcchc9	T	C	13: 91,797,249	I72V	probably benign	Het
Zfc3h1	G	T	10: 115,423,474	L1650F	possibly damaging	Het
Zzz3	A	G	3: 152,428,403	D366G	possibly damaging	Het

Other mutations in Ticrr

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00087:Ticrr	APN	7	79677283	missense	probably damaging	1.00
IGL00596:Ticrr	APN	7	79677293	missense	probably damaging	1.00
IGL01327:Ticrr	APN	7	79694461	missense	probably benign	0.00
IGL01525:Ticrr	APN	7	79682449	missense	probably damaging	1.00
IGL01565:Ticrr	APN	7	79694548	missense	probably benign
IGL01936:Ticrr	APN	7	79694549	missense	probably benign	0.11
IGL02160:Ticrr	APN	7	79694019	missense	probably benign	0.29
IGL02246:Ticrr	APN	7	79675328	missense	probably damaging	1.00
IGL02487:Ticrr	APN	7	79683021	missense	possibly damaging	0.86
IGL02593:Ticrr	APN	7	79695466	missense	probably damaging	0.99
IGL02970:Ticrr	APN	7	79695171	missense	probably benign	0.01
FR4304:Ticrr	UTSW	7	79694311	intron	probably benign
PIT4305001:Ticrr	UTSW	7	79679023	missense	possibly damaging	0.95
PIT4791001:Ticrr	UTSW	7	79669638	missense	possibly damaging	0.92
R0016:Ticrr	UTSW	7	79693792	missense	probably benign	0.01
R0062:Ticrr	UTSW	7	79667906	missense	probably benign	0.01
R0062:Ticrr	UTSW	7	79667906	missense	probably benign	0.01
R0067:Ticrr	UTSW	7	79677410	missense	probably damaging	1.00
R0362:Ticrr	UTSW	7	79677340	missense	probably damaging	1.00
R0482:Ticrr	UTSW	7	79694488	missense	probably damaging	0.99
R0595:Ticrr	UTSW	7	79695563	missense	possibly damaging	0.94
R1118:Ticrr	UTSW	7	79693953	missense	probably benign	0.23
R1119:Ticrr	UTSW	7	79693953	missense	probably benign	0.23
R1572:Ticrr	UTSW	7	79681824	missense	probably damaging	1.00
R1658:Ticrr	UTSW	7	79695549	missense	possibly damaging	0.57
R1757:Ticrr	UTSW	7	79675323	missense	probably damaging	0.99
R1757:Ticrr	UTSW	7	79679046	nonsense	probably null
R1862:Ticrr	UTSW	7	79695207	missense	probably damaging	1.00
R1869:Ticrr	UTSW	7	79679135	missense	probably damaging	1.00
R1938:Ticrr	UTSW	7	79675394	missense	probably damaging	0.98
R1966:Ticrr	UTSW	7	79694735	nonsense	probably null
R2006:Ticrr	UTSW	7	79694073	missense	possibly damaging	0.93
R2178:Ticrr	UTSW	7	79665685	missense	probably benign	0.12
R3404:Ticrr	UTSW	7	79694791	missense	probably benign	0.06
R3405:Ticrr	UTSW	7	79694791	missense	probably benign	0.06
R3941:Ticrr	UTSW	7	79693697	intron	probably benign
R3950:Ticrr	UTSW	7	79682069	missense	probably damaging	1.00
R3951:Ticrr	UTSW	7	79682069	missense	probably damaging	1.00
R3952:Ticrr	UTSW	7	79682069	missense	probably damaging	1.00
R4967:Ticrr	UTSW	7	79660410	missense	probably damaging	0.99
R4972:Ticrr	UTSW	7	79669668	missense	probably damaging	0.98
R5259:Ticrr	UTSW	7	79694723	missense	probably benign	0.01
R5272:Ticrr	UTSW	7	79669605	missense	probably benign	0.44
R5374:Ticrr	UTSW	7	79690942	nonsense	probably null
R5480:Ticrr	UTSW	7	79660809	missense	probably damaging	1.00
R5568:Ticrr	UTSW	7	79689967	critical splice donor site	probably null
R5568:Ticrr	UTSW	7	79695296	nonsense	probably null
R5588:Ticrr	UTSW	7	79679105	missense	probably damaging	1.00
R5698:Ticrr	UTSW	7	79679133	missense	probably benign
R5879:Ticrr	UTSW	7	79696690	missense	probably benign	0.12
R5980:Ticrr	UTSW	7	79660955	missense	probably damaging	0.99
R6128:Ticrr	UTSW	7	79693968	missense	probably damaging	1.00
R6277:Ticrr	UTSW	7	79694696	missense	probably benign	0.00
R6335:Ticrr	UTSW	7	79694283	unclassified	probably null
R6866:Ticrr	UTSW	7	79693957	missense	possibly damaging	0.47
R6905:Ticrr	UTSW	7	79665850	missense	probably benign	0.00
R6923:Ticrr	UTSW	7	79691853	missense	probably damaging	0.98
R6962:Ticrr	UTSW	7	79665897	missense	possibly damaging	0.84
R7232:Ticrr	UTSW	7	79693742	missense	probably damaging	0.96
R7285:Ticrr	UTSW	7	79660862	missense	possibly damaging	0.93
R7385:Ticrr	UTSW	7	79691849	missense	possibly damaging	0.93
R7426:Ticrr	UTSW	7	79693986	missense	probably benign
R7583:Ticrr	UTSW	7	79696739	nonsense	probably null
R7749:Ticrr	UTSW	7	79679096	missense	possibly damaging	0.94
R7863:Ticrr	UTSW	7	79682012	missense	possibly damaging	0.92
R7899:Ticrr	UTSW	7	79669485	missense	probably benign	0.23
R8005:Ticrr	UTSW	7	79694048	missense	probably damaging	0.98
R8181:Ticrr	UTSW	7	79660980	missense	possibly damaging	0.92

Posted On

2013-01-20