Incidental Mutation 'R1554:Slc35d3'
ID170161
Institutional Source Beutler Lab
Gene Symbol Slc35d3
Ensembl Gene ENSMUSG00000050473
Gene Namesolute carrier family 35, member D3
Synonyms6230421J19Rik, Frcl1
MMRRC Submission 039593-MU
Accession Numbers
Is this an essential gene? Possibly non essential (E-score: 0.408) question?
Stock #R1554 (G1)
Quality Score113
Status Not validated
Chromosome10
Chromosomal Location19847916-19851459 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) G to T at 19850737 bp
ZygosityHeterozygous
Amino Acid Change Leucine to Methionine at position 96 (L96M)
Ref Sequence ENSEMBL: ENSMUSP00000060589 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000020182] [ENSMUST00000059805]
Predicted Effect probably benign
Transcript: ENSMUST00000020182
SMART Domains Protein: ENSMUSP00000020182
Gene: ENSMUSG00000020003

DomainStartEndE-ValueType
WD40 52 91 9.24e-4 SMART
WD40 95 136 6.14e-9 SMART
WD40 139 179 8.55e-8 SMART
WD40 182 222 3.5e-4 SMART
WD40 226 266 1.3e-7 SMART
WD40 270 310 6.66e-1 SMART
Predicted Effect probably damaging
Transcript: ENSMUST00000059805
AA Change: L96M

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000060589
Gene: ENSMUSG00000050473
AA Change: L96M

DomainStartEndE-ValueType
transmembrane domain 7 29 N/A INTRINSIC
low complexity region 47 64 N/A INTRINSIC
low complexity region 84 96 N/A INTRINSIC
transmembrane domain 101 123 N/A INTRINSIC
transmembrane domain 130 152 N/A INTRINSIC
transmembrane domain 156 175 N/A INTRINSIC
transmembrane domain 187 209 N/A INTRINSIC
transmembrane domain 224 246 N/A INTRINSIC
transmembrane domain 253 275 N/A INTRINSIC
transmembrane domain 280 302 N/A INTRINSIC
Coding Region Coverage
  • 1x: 99.0%
  • 3x: 98.0%
  • 10x: 95.2%
  • 20x: 89.0%
Validation Efficiency
MGI Phenotype PHENOTYPE: Mice homozygous for a spontaneous mutation exhibit decreased platelet serotonin. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 56 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A1cf T A 19: 31,908,902 D70E possibly damaging Het
Adamts7 A T 9: 90,173,650 D152V probably damaging Het
Api5 T C 2: 94,425,643 D233G probably benign Het
Btaf1 A G 19: 36,996,598 D1390G probably benign Het
Cep135 G A 5: 76,634,213 W893* probably null Het
Cmtm6 T A 9: 114,746,482 V153D possibly damaging Het
Dnah11 C T 12: 118,082,499 V1735I possibly damaging Het
Dnm1l T C 16: 16,341,426 N104S probably benign Het
Dpyd A T 3: 119,065,046 probably null Het
Dtx1 T C 5: 120,683,321 K387R probably damaging Het
Ercc4 A G 16: 13,147,622 D706G probably damaging Het
Fam208b A G 13: 3,576,374 V1192A possibly damaging Het
Fat2 T C 11: 55,253,664 N4128S probably benign Het
Gm42669 T A 5: 107,507,787 C639S possibly damaging Het
Grk3 T A 5: 112,969,269 I89L possibly damaging Het
Grm8 A T 6: 28,125,853 D91E probably benign Het
Havcr1 C A 11: 46,752,507 H85N probably benign Het
Il12rb1 G A 8: 70,813,372 probably null Het
Kif3a A G 11: 53,598,327 K117E probably damaging Het
Kitl T A 10: 100,087,438 F15L probably benign Het
Ktn1 T G 14: 47,695,507 L706R probably damaging Het
Lipg T C 18: 74,948,047 Y321C probably damaging Het
Mapk8ip3 T C 17: 24,903,059 D710G probably benign Het
Mb21d1 A T 9: 78,435,556 S321R probably damaging Het
Mchr1 A G 15: 81,235,820 N16S probably benign Het
Myadml2 A T 11: 120,647,727 L94* probably null Het
Npr3 C A 15: 11,848,563 M439I probably benign Het
Obscn A G 11: 59,003,648 I6677T unknown Het
Ogn A C 13: 49,621,044 D221A probably benign Het
Olfr889 T C 9: 38,115,934 I46T probably benign Het
Pard3b C A 1: 62,637,894 Q1195K probably damaging Het
Pcsk4 T C 10: 80,321,951 E608G probably benign Het
Pdlim1 T C 19: 40,223,072 D259G probably benign Het
Per1 T C 11: 69,103,627 S526P probably damaging Het
Pfkfb2 A G 1: 130,706,472 V156A probably damaging Het
Ppp4r3a A T 12: 101,055,822 D307E probably damaging Het
Rims4 T C 2: 163,879,122 S70G probably damaging Het
Rnf213 T C 11: 119,441,839 F2625L probably benign Het
Sap130 T C 18: 31,666,472 L334P probably damaging Het
Slc16a10 T C 10: 40,076,800 I233V probably benign Het
Slc16a7 A C 10: 125,230,922 F283V possibly damaging Het
Slc25a24 T C 3: 109,136,270 M81T probably benign Het
Slc30a9 A G 5: 67,326,921 R134G probably damaging Het
Slc7a11 C T 3: 50,381,896 G333D probably damaging Het
Stam T C 2: 14,141,828 S446P probably benign Het
Stk38 T A 17: 28,979,232 N248I possibly damaging Het
Tle6 A C 10: 81,595,385 S221A probably benign Het
Tmprss11b G A 5: 86,661,631 T334I probably benign Het
Tmprss11c T A 5: 86,289,260 M1L possibly damaging Het
Tpm1 T C 9: 67,023,429 H262R probably benign Het
Tspan33 T C 6: 29,711,082 S118P possibly damaging Het
Tyk2 A G 9: 21,107,922 V1068A probably damaging Het
Ubr2 T C 17: 46,972,951 I591V probably benign Het
Utp20 A T 10: 88,764,737 Y38* probably null Het
Vmn1r217 A T 13: 23,114,294 I146N possibly damaging Het
Zfp608 T C 18: 54,898,054 Y938C probably damaging Het
Other mutations in Slc35d3
AlleleSourceChrCoordTypePredicted EffectPPH Score
R0080:Slc35d3 UTSW 10 19849198 missense probably damaging 1.00
R1618:Slc35d3 UTSW 10 19849163 missense probably benign 0.42
R2867:Slc35d3 UTSW 10 19849463 missense probably benign
R2867:Slc35d3 UTSW 10 19849463 missense probably benign
R3930:Slc35d3 UTSW 10 19848859 missense probably damaging 1.00
R4393:Slc35d3 UTSW 10 19849606 splice site probably null
R4627:Slc35d3 UTSW 10 19849331 missense probably damaging 1.00
R6540:Slc35d3 UTSW 10 19849340 missense possibly damaging 0.94
R7804:Slc35d3 UTSW 10 19849370 missense probably damaging 1.00
Z1176:Slc35d3 UTSW 10 19850583 critical splice donor site probably null
Predicted Primers PCR Primer
(F):5'- ACTCAAAGCTCCCTGCCTCAGTATC -3'
(R):5'- TGCTCAAGTTCCTCATCAGCCG -3'

Sequencing Primer
(F):5'- TATCCCCATCTGGCAGTGAG -3'
(R):5'- ATCAGCCGCTACCAGTTC -3'
Posted On2014-04-13