Incidental Mutation 'R1541:Nlrp4b'
ID 171729
Institutional Source Beutler Lab
Gene Symbol Nlrp4b
Ensembl Gene ENSMUSG00000034087
Gene Name NLR family, pyrin domain containing 4B
Synonyms Nalp4b, Nalp-gamma
MMRRC Submission 039580-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.065) question?
Stock # R1541 (G1)
Quality Score 225
Status Not validated
Chromosome 7
Chromosomal Location 10421720-10464095 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) C to A at 10458979 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Asparagine at position 399 (T399N)
Ref Sequence ENSEMBL: ENSMUSP00000115831 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000047809] [ENSMUST00000117413] [ENSMUST00000132990] [ENSMUST00000211069]
AlphaFold Q8C6J9
Predicted Effect probably benign
Transcript: ENSMUST00000047809
AA Change: T766N

PolyPhen 2 Score 0.214 (Sensitivity: 0.92; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000043881
Gene: ENSMUSG00000034087
AA Change: T766N

DomainStartEndE-ValueType
PYRIN 6 89 1.4e-20 SMART
Pfam:NACHT 143 312 7.9e-40 PFAM
low complexity region 520 535 N/A INTRINSIC
LRR 683 710 4.9e0 SMART
LRR 712 739 1.97e0 SMART
LRR 740 767 1.13e-4 SMART
LRR 769 796 1.93e1 SMART
LRR 797 824 1.73e0 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000117413
AA Change: T766N

PolyPhen 2 Score 0.214 (Sensitivity: 0.92; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000113095
Gene: ENSMUSG00000034087
AA Change: T766N

DomainStartEndE-ValueType
PYRIN 6 89 1.4e-20 SMART
Pfam:NACHT 143 312 3.3e-39 PFAM
low complexity region 520 535 N/A INTRINSIC
LRR 683 710 4.9e0 SMART
LRR 712 739 1.97e0 SMART
LRR 740 767 1.13e-4 SMART
LRR 769 796 1.93e1 SMART
LRR 797 824 1.73e0 SMART
Predicted Effect possibly damaging
Transcript: ENSMUST00000132990
AA Change: T399N

PolyPhen 2 Score 0.910 (Sensitivity: 0.81; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000115831
Gene: ENSMUSG00000034087
AA Change: T399N

DomainStartEndE-ValueType
low complexity region 153 168 N/A INTRINSIC
LRR 316 343 4.9e0 SMART
LRR 345 372 1.97e0 SMART
LRR 373 400 1.13e-4 SMART
LRR 402 429 1.93e1 SMART
LRR 430 457 1.73e0 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000211069
AA Change: T152N

PolyPhen 2 Score 0.360 (Sensitivity: 0.90; Specificity: 0.89)
Predicted Effect unknown
Transcript: ENSMUST00000211258
AA Change: T61N
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.2%
  • 10x: 96.0%
  • 20x: 91.3%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 63 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acod1 A G 14: 103,286,769 (GRCm39) D24G probably damaging Het
Angptl2 G A 2: 33,136,177 (GRCm39) R454H probably benign Het
Atat1 T A 17: 36,215,223 (GRCm39) N181I probably damaging Het
Atp6v0d2 A C 4: 19,910,645 (GRCm39) F82V probably damaging Het
Calhm4 T C 10: 33,917,659 (GRCm39) H264R probably benign Het
Casp3 A G 8: 47,087,369 (GRCm39) I105M probably benign Het
Ccdc33 T A 9: 58,024,749 (GRCm39) D159V probably damaging Het
Cd163 A C 6: 124,304,920 (GRCm39) D1099A probably benign Het
Cep128 A T 12: 91,315,555 (GRCm39) S110R probably damaging Het
Cfap43 A T 19: 47,752,291 (GRCm39) probably null Het
Cfap58 T C 19: 47,971,969 (GRCm39) I633T probably damaging Het
Clvs1 A G 4: 9,281,814 (GRCm39) H86R probably benign Het
Comt T C 16: 18,230,565 (GRCm39) K48R probably benign Het
Crip2 T C 12: 113,108,586 (GRCm39) V64A possibly damaging Het
Cstdc5 T A 16: 36,187,863 (GRCm39) M1L probably damaging Het
Cwf19l2 T A 9: 3,456,760 (GRCm39) S698T probably damaging Het
Dis3l T C 9: 64,214,771 (GRCm39) I933V probably benign Het
Dnah8 C A 17: 30,966,221 (GRCm39) N2470K probably damaging Het
Dstn T C 2: 143,780,408 (GRCm39) V36A possibly damaging Het
Dtx1 T A 5: 120,848,411 (GRCm39) probably benign Het
Dzip1 G A 14: 119,116,890 (GRCm39) S782L probably damaging Het
Ece1 T A 4: 137,675,971 (GRCm39) probably null Het
Erich1 A G 8: 14,080,688 (GRCm39) I277T probably damaging Het
Gbp4 T A 5: 105,266,275 (GRCm39) M589L probably benign Het
Grip1 T C 10: 119,836,448 (GRCm39) I440T probably damaging Het
Helz C T 11: 107,560,874 (GRCm39) S1311L probably benign Het
Herc2 A T 7: 55,785,405 (GRCm39) I1552F probably damaging Het
Kif13a T C 13: 46,962,689 (GRCm39) T459A probably benign Het
Knop1 G A 7: 118,455,009 (GRCm39) probably benign Het
Llgl2 C A 11: 115,743,947 (GRCm39) T758K probably benign Het
Lonrf2 G A 1: 38,852,357 (GRCm39) P165S probably benign Het
Lrrc71 T C 3: 87,649,148 (GRCm39) D340G possibly damaging Het
Luzp1 A G 4: 136,270,636 (GRCm39) D953G probably damaging Het
Mst1r T C 9: 107,794,562 (GRCm39) V1247A probably damaging Het
Ncoa4 A T 14: 31,898,845 (GRCm39) K555M probably damaging Het
Ncoa6 A T 2: 155,257,224 (GRCm39) L773Q probably benign Het
Ndc1 C T 4: 107,228,485 (GRCm39) Q70* probably null Het
Nfe2l3 C T 6: 51,434,585 (GRCm39) L382F probably damaging Het
Nsmce2 T A 15: 59,473,234 (GRCm39) D250E probably damaging Het
Nudt14 A T 12: 112,898,548 (GRCm39) L184Q probably damaging Het
Ogdhl G A 14: 32,062,624 (GRCm39) R570H possibly damaging Het
Or5p56 T C 7: 107,590,048 (GRCm39) F159L probably benign Het
Pira13 T C 7: 3,819,988 (GRCm39) D525G probably damaging Het
Plag1 A G 4: 3,904,085 (GRCm39) S369P probably benign Het
Ranbp2 A T 10: 58,318,916 (GRCm39) T2476S possibly damaging Het
Rnmt T C 18: 68,440,853 (GRCm39) L172P probably damaging Het
Sec24a T A 11: 51,634,623 (GRCm39) H101L probably benign Het
Sirpd T A 3: 15,385,744 (GRCm39) T53S possibly damaging Het
Srm A G 4: 148,677,881 (GRCm39) D173G probably damaging Het
Srp54b A G 12: 55,302,844 (GRCm39) D380G probably benign Het
Svs5 C T 2: 164,078,929 (GRCm39) R326Q possibly damaging Het
Tent4b T C 8: 88,972,227 (GRCm39) V222A probably damaging Het
Tfap2b C T 1: 19,304,294 (GRCm39) T350M probably damaging Het
Tie1 A T 4: 118,341,070 (GRCm39) C304S probably damaging Het
Tsc2 G T 17: 24,850,950 (GRCm39) T36N probably damaging Het
Wdhd1 A T 14: 47,505,649 (GRCm39) Y274* probably null Het
Wdr37 T C 13: 8,870,574 (GRCm39) T373A probably benign Het
Xirp2 A T 2: 67,342,634 (GRCm39) N1625I possibly damaging Het
Ythdf1 A C 2: 180,560,936 (GRCm39) S35A probably damaging Het
Zfp462 A G 4: 55,008,928 (GRCm39) N298S possibly damaging Het
Zfp541 T A 7: 15,812,437 (GRCm39) D363E probably benign Het
Zgpat A G 2: 181,020,658 (GRCm39) D277G probably benign Het
Znfx1 A T 2: 166,898,110 (GRCm39) N271K probably damaging Het
Other mutations in Nlrp4b
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00971:Nlrp4b APN 7 10,448,882 (GRCm39) missense possibly damaging 0.68
IGL01456:Nlrp4b APN 7 10,448,150 (GRCm39) missense probably benign 0.26
IGL01537:Nlrp4b APN 7 10,448,918 (GRCm39) missense probably damaging 1.00
IGL02539:Nlrp4b APN 7 10,448,355 (GRCm39) missense probably damaging 0.96
IGL02730:Nlrp4b APN 7 10,448,685 (GRCm39) missense probably damaging 1.00
IGL02871:Nlrp4b APN 7 10,449,192 (GRCm39) missense probably benign 0.26
IGL03008:Nlrp4b APN 7 10,448,516 (GRCm39) missense probably benign 0.00
IGL03109:Nlrp4b APN 7 10,448,873 (GRCm39) missense probably damaging 1.00
IGL03251:Nlrp4b APN 7 10,448,427 (GRCm39) missense probably benign 0.01
IGL03354:Nlrp4b APN 7 10,448,465 (GRCm39) missense probably damaging 0.99
R0052:Nlrp4b UTSW 7 10,459,889 (GRCm39) nonsense probably null
R0348:Nlrp4b UTSW 7 10,449,108 (GRCm39) missense possibly damaging 0.60
R0564:Nlrp4b UTSW 7 10,448,585 (GRCm39) missense probably benign 0.15
R0573:Nlrp4b UTSW 7 10,448,142 (GRCm39) missense probably benign 0.01
R0581:Nlrp4b UTSW 7 10,448,457 (GRCm39) missense probably damaging 1.00
R1201:Nlrp4b UTSW 7 10,449,363 (GRCm39) missense possibly damaging 0.64
R1771:Nlrp4b UTSW 7 10,452,520 (GRCm39) missense probably damaging 0.96
R1781:Nlrp4b UTSW 7 10,449,266 (GRCm39) missense probably benign 0.13
R1833:Nlrp4b UTSW 7 10,459,863 (GRCm39) missense probably benign 0.00
R2405:Nlrp4b UTSW 7 10,448,655 (GRCm39) missense probably benign 0.08
R2871:Nlrp4b UTSW 7 10,444,170 (GRCm39) nonsense probably null
R2871:Nlrp4b UTSW 7 10,444,170 (GRCm39) nonsense probably null
R2873:Nlrp4b UTSW 7 10,444,170 (GRCm39) nonsense probably null
R2904:Nlrp4b UTSW 7 10,448,294 (GRCm39) missense probably damaging 1.00
R3410:Nlrp4b UTSW 7 10,449,456 (GRCm39) missense probably damaging 1.00
R3714:Nlrp4b UTSW 7 10,448,808 (GRCm39) missense probably benign 0.04
R3982:Nlrp4b UTSW 7 10,448,358 (GRCm39) missense possibly damaging 0.95
R4668:Nlrp4b UTSW 7 10,448,660 (GRCm39) missense possibly damaging 0.66
R4690:Nlrp4b UTSW 7 10,453,130 (GRCm39) missense probably benign 0.00
R4857:Nlrp4b UTSW 7 10,449,225 (GRCm39) missense probably benign 0.05
R5247:Nlrp4b UTSW 7 10,448,145 (GRCm39) missense probably benign 0.21
R5381:Nlrp4b UTSW 7 10,449,172 (GRCm39) nonsense probably null
R5529:Nlrp4b UTSW 7 10,448,873 (GRCm39) missense possibly damaging 0.91
R5589:Nlrp4b UTSW 7 10,449,512 (GRCm39) missense probably benign 0.34
R5770:Nlrp4b UTSW 7 10,449,414 (GRCm39) missense probably benign 0.00
R5990:Nlrp4b UTSW 7 10,448,418 (GRCm39) missense possibly damaging 0.61
R6049:Nlrp4b UTSW 7 10,448,640 (GRCm39) nonsense probably null
R6329:Nlrp4b UTSW 7 10,458,847 (GRCm39) missense probably benign 0.16
R6377:Nlrp4b UTSW 7 10,449,339 (GRCm39) missense probably benign 0.00
R7107:Nlrp4b UTSW 7 10,449,144 (GRCm39) missense probably damaging 0.96
R7209:Nlrp4b UTSW 7 10,444,297 (GRCm39) missense probably benign 0.01
R7237:Nlrp4b UTSW 7 10,449,143 (GRCm39) missense probably benign 0.12
R7537:Nlrp4b UTSW 7 10,448,816 (GRCm39) missense probably benign 0.05
R7793:Nlrp4b UTSW 7 10,459,001 (GRCm39) missense probably benign 0.00
R8138:Nlrp4b UTSW 7 10,449,458 (GRCm39) missense probably benign 0.01
R8190:Nlrp4b UTSW 7 10,448,319 (GRCm39) missense probably damaging 0.96
R8326:Nlrp4b UTSW 7 10,452,471 (GRCm39) missense probably benign 0.05
R8353:Nlrp4b UTSW 7 10,449,528 (GRCm39) missense probably damaging 0.99
R8417:Nlrp4b UTSW 7 10,459,880 (GRCm39) nonsense probably null
R8453:Nlrp4b UTSW 7 10,449,528 (GRCm39) missense probably damaging 0.99
R8998:Nlrp4b UTSW 7 10,449,629 (GRCm39) missense probably null 0.00
R9002:Nlrp4b UTSW 7 10,448,886 (GRCm39) missense probably damaging 1.00
R9072:Nlrp4b UTSW 7 10,459,870 (GRCm39) missense probably benign 0.02
R9073:Nlrp4b UTSW 7 10,459,870 (GRCm39) missense probably benign 0.02
R9258:Nlrp4b UTSW 7 10,444,087 (GRCm39) missense probably damaging 1.00
R9373:Nlrp4b UTSW 7 10,449,126 (GRCm39) missense probably benign 0.01
R9525:Nlrp4b UTSW 7 10,448,748 (GRCm39) missense probably damaging 0.99
R9604:Nlrp4b UTSW 7 10,444,295 (GRCm39) missense probably benign 0.00
R9670:Nlrp4b UTSW 7 10,448,651 (GRCm39) missense probably benign 0.11
R9679:Nlrp4b UTSW 7 10,449,184 (GRCm39) missense probably benign 0.00
X0063:Nlrp4b UTSW 7 10,463,514 (GRCm39) missense probably benign 0.01
Predicted Primers PCR Primer
(F):5'- AGCTAAAAGTTCGTCCCCTTGCTTG -3'
(R):5'- GTGGCTTCCCACCATTTACCAAAAC -3'

Sequencing Primer
(F):5'- AAGGTTTTCTGCCCATTCATATAC -3'
(R):5'- CCATGACACAGAGGTCAAGG -3'
Posted On 2014-04-13