Incidental Mutation 'R1547:Cd101'
ID 172250
Institutional Source Beutler Lab
Gene Symbol Cd101
Ensembl Gene ENSMUSG00000086564
Gene Name CD101 antigen
Synonyms LOC381460, Igsf2
MMRRC Submission 039586-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R1547 (G1)
Quality Score 225
Status Not validated
Chromosome 3
Chromosomal Location 100900845-100936872 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 100926267 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Alanine at position 151 (T151A)
Ref Sequence ENSEMBL: ENSMUSP00000126027 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000147399] [ENSMUST00000167086]
AlphaFold A8E0Y8
Predicted Effect possibly damaging
Transcript: ENSMUST00000147399
AA Change: T155A

PolyPhen 2 Score 0.943 (Sensitivity: 0.80; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000116643
Gene: ENSMUSG00000086564
AA Change: T155A

DomainStartEndE-ValueType
signal peptide 1 20 N/A INTRINSIC
IG 28 143 4.96e-8 SMART
IG 153 266 4.74e-5 SMART
IG_like 274 379 2.19e-1 SMART
IG 289 395 3.25e-3 SMART
IG 417 533 4.85e-11 SMART
IG 545 659 1.52e-3 SMART
IG 680 805 3.16e-1 SMART
IG_like 827 927 2.95e-1 SMART
IG 856 955 1.04e-1 SMART
transmembrane domain 971 993 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000167086
AA Change: T151A

PolyPhen 2 Score 0.943 (Sensitivity: 0.80; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000126027
Gene: ENSMUSG00000086564
AA Change: T151A

DomainStartEndE-ValueType
IG 24 139 4.96e-8 SMART
IG 149 262 4.74e-5 SMART
IG_like 270 375 2.19e-1 SMART
IG 285 391 3.25e-3 SMART
IG 413 529 4.85e-11 SMART
IG 541 655 1.52e-3 SMART
IG 676 801 3.16e-1 SMART
IG_like 823 923 2.95e-1 SMART
IG 852 951 1.04e-1 SMART
transmembrane domain 967 989 N/A INTRINSIC
Coding Region Coverage
  • 1x: 99.0%
  • 3x: 98.1%
  • 10x: 95.5%
  • 20x: 89.3%
Validation Efficiency
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele exhibit reduced Gr-1+ cells. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 56 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adam17 A C 12: 21,403,958 (GRCm39) V96G probably damaging Het
Adam5 G T 8: 25,300,729 (GRCm39) Q267K probably benign Het
Adamts6 A G 13: 104,581,383 (GRCm39) T833A probably benign Het
Ago4 C T 4: 126,405,206 (GRCm39) E456K probably benign Het
Anapc1 T C 2: 128,459,476 (GRCm39) Q1861R probably benign Het
Apob A T 12: 8,053,368 (GRCm39) D1270V probably benign Het
Arb2a T C 13: 77,973,509 (GRCm39) probably null Het
Arhgef11 T A 3: 87,602,709 (GRCm39) I196N possibly damaging Het
Armh4 A T 14: 50,010,953 (GRCm39) D251E probably benign Het
Capzb G A 4: 138,989,409 (GRCm39) probably null Het
Ccdc183 T A 2: 25,499,362 (GRCm39) T466S probably benign Het
Cdc42bpa A T 1: 179,902,209 (GRCm39) I489F probably damaging Het
Cetn4 T C 3: 37,363,600 (GRCm39) K52R possibly damaging Het
Dock6 C T 9: 21,725,884 (GRCm39) E1440K probably damaging Het
Edem2 A G 2: 155,564,436 (GRCm39) F94L probably damaging Het
Elp1 C A 4: 56,792,090 (GRCm39) R226L probably damaging Het
Elp1 C T 4: 56,798,810 (GRCm39) V51M probably damaging Het
Entrep1 T C 19: 23,957,065 (GRCm39) D315G probably damaging Het
Etl4 T C 2: 20,790,039 (GRCm39) S881P probably damaging Het
Fat2 G A 11: 55,143,081 (GRCm39) P4256L probably benign Het
Fmnl2 A G 2: 52,995,549 (GRCm39) E424G probably damaging Het
Kif19a A G 11: 114,677,398 (GRCm39) E594G probably benign Het
Kifap3 A G 1: 163,621,655 (GRCm39) D101G probably benign Het
Klhl6 T C 16: 19,784,832 (GRCm39) D102G probably benign Het
Klra3 G C 6: 130,310,107 (GRCm39) R138G probably benign Het
Lamb2 A G 9: 108,359,824 (GRCm39) H388R probably benign Het
Lmna T C 3: 88,389,658 (GRCm39) S656G probably benign Het
Map3k12 T A 15: 102,412,287 (GRCm39) I285F probably damaging Het
Map3k7 A G 4: 31,991,796 (GRCm39) I345V probably benign Het
Mcph1 A G 8: 18,672,702 (GRCm39) R111G possibly damaging Het
Mfsd6l T A 11: 68,447,434 (GRCm39) V95D probably damaging Het
Mogs T A 6: 83,093,006 (GRCm39) M118K possibly damaging Het
Npy5r T C 8: 67,133,686 (GRCm39) E369G possibly damaging Het
Nudt16l2 A T 9: 105,021,889 (GRCm39) F52L probably damaging Het
Or10j3 T A 1: 173,031,239 (GRCm39) Y105* probably null Het
Or2t49 A G 11: 58,392,651 (GRCm39) S244P probably damaging Het
Or8b12b A C 9: 37,683,960 (GRCm39) T2P probably benign Het
Pde7b C A 10: 20,310,340 (GRCm39) L207F probably damaging Het
Pigo A G 4: 43,020,689 (GRCm39) V751A probably benign Het
Polr2a T C 11: 69,625,381 (GRCm39) Y1923C probably benign Het
Prokr2 T C 2: 132,215,522 (GRCm39) Y152C probably damaging Het
Rab40c A G 17: 26,102,724 (GRCm39) S223P probably damaging Het
Recql4 A C 15: 76,590,511 (GRCm39) C658G probably damaging Het
Sgca T C 11: 94,860,259 (GRCm39) T46A probably damaging Het
Slc39a4 G T 15: 76,498,347 (GRCm39) C363* probably null Het
Snap25 A T 2: 136,619,389 (GRCm39) I181F possibly damaging Het
Snx32 T A 19: 5,547,339 (GRCm39) Q256L possibly damaging Het
Soat1 A G 1: 156,267,331 (GRCm39) V284A probably damaging Het
Sox6 G A 7: 115,300,957 (GRCm39) T170M possibly damaging Het
Spag16 G T 1: 69,912,402 (GRCm39) V246F possibly damaging Het
St6galnac6 T C 2: 32,504,977 (GRCm39) V141A possibly damaging Het
Sult2a7 T A 7: 14,211,047 (GRCm39) probably null Het
Syngr3 A T 17: 24,906,698 (GRCm39) V39E probably damaging Het
Tango6 A G 8: 107,508,418 (GRCm39) T917A probably damaging Het
Tas1r1 A G 4: 152,112,876 (GRCm39) S726P probably damaging Het
Zeb1 C T 18: 5,767,450 (GRCm39) R654C possibly damaging Het
Other mutations in Cd101
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00958:Cd101 APN 3 100,911,018 (GRCm39) missense probably damaging 1.00
IGL01443:Cd101 APN 3 100,910,887 (GRCm39) missense probably benign
IGL02000:Cd101 APN 3 100,919,398 (GRCm39) missense probably benign 0.11
IGL02178:Cd101 APN 3 100,901,082 (GRCm39) missense probably damaging 1.00
IGL02224:Cd101 APN 3 100,924,318 (GRCm39) missense probably benign
IGL02450:Cd101 APN 3 100,901,054 (GRCm39) missense probably damaging 0.99
IGL02502:Cd101 APN 3 100,919,141 (GRCm39) missense probably damaging 0.99
IGL02536:Cd101 APN 3 100,910,913 (GRCm39) missense probably damaging 1.00
IGL02749:Cd101 APN 3 100,927,715 (GRCm39) missense probably damaging 1.00
IGL02818:Cd101 APN 3 100,919,245 (GRCm39) missense probably damaging 1.00
IGL02829:Cd101 APN 3 100,925,881 (GRCm39) splice site probably benign
IGL02902:Cd101 APN 3 100,926,310 (GRCm39) splice site probably benign
tax_day UTSW 3 100,911,021 (GRCm39) missense possibly damaging 0.86
R0069:Cd101 UTSW 3 100,915,533 (GRCm39) missense probably benign 0.08
R0069:Cd101 UTSW 3 100,915,533 (GRCm39) missense probably benign 0.08
R0411:Cd101 UTSW 3 100,925,843 (GRCm39) splice site probably null
R0486:Cd101 UTSW 3 100,915,408 (GRCm39) missense possibly damaging 0.94
R0556:Cd101 UTSW 3 100,927,970 (GRCm39) missense probably damaging 1.00
R0726:Cd101 UTSW 3 100,927,938 (GRCm39) missense possibly damaging 0.95
R0966:Cd101 UTSW 3 100,915,538 (GRCm39) missense probably benign 0.13
R1344:Cd101 UTSW 3 100,926,091 (GRCm39) nonsense probably null
R1418:Cd101 UTSW 3 100,926,091 (GRCm39) nonsense probably null
R1551:Cd101 UTSW 3 100,919,329 (GRCm39) missense probably damaging 0.99
R1845:Cd101 UTSW 3 100,936,764 (GRCm39) splice site probably null
R1919:Cd101 UTSW 3 100,926,233 (GRCm39) missense probably damaging 1.00
R1976:Cd101 UTSW 3 100,915,377 (GRCm39) missense probably damaging 0.96
R2260:Cd101 UTSW 3 100,924,261 (GRCm39) missense possibly damaging 0.82
R2679:Cd101 UTSW 3 100,901,079 (GRCm39) missense probably benign 0.00
R2873:Cd101 UTSW 3 100,911,164 (GRCm39) missense probably benign 0.00
R3606:Cd101 UTSW 3 100,927,913 (GRCm39) missense probably damaging 1.00
R4201:Cd101 UTSW 3 100,926,001 (GRCm39) missense probably damaging 1.00
R4202:Cd101 UTSW 3 100,926,001 (GRCm39) missense probably damaging 1.00
R4205:Cd101 UTSW 3 100,926,001 (GRCm39) missense probably damaging 1.00
R4349:Cd101 UTSW 3 100,920,630 (GRCm39) missense possibly damaging 0.93
R4574:Cd101 UTSW 3 100,920,469 (GRCm39) missense probably benign 0.02
R4601:Cd101 UTSW 3 100,901,204 (GRCm39) missense possibly damaging 0.84
R4820:Cd101 UTSW 3 100,929,471 (GRCm39) missense probably benign 0.01
R4910:Cd101 UTSW 3 100,901,205 (GRCm39) missense probably benign 0.13
R5014:Cd101 UTSW 3 100,911,139 (GRCm39) missense probably damaging 0.99
R5081:Cd101 UTSW 3 100,911,021 (GRCm39) missense possibly damaging 0.86
R5396:Cd101 UTSW 3 100,926,126 (GRCm39) missense probably damaging 1.00
R5425:Cd101 UTSW 3 100,926,002 (GRCm39) missense probably damaging 1.00
R6193:Cd101 UTSW 3 100,927,778 (GRCm39) missense probably damaging 1.00
R6210:Cd101 UTSW 3 100,925,959 (GRCm39) missense probably damaging 1.00
R6732:Cd101 UTSW 3 100,915,515 (GRCm39) missense probably benign 0.01
R6830:Cd101 UTSW 3 100,901,012 (GRCm39) missense probably benign 0.12
R6897:Cd101 UTSW 3 100,920,376 (GRCm39) missense probably damaging 1.00
R6940:Cd101 UTSW 3 100,911,018 (GRCm39) missense probably damaging 1.00
R7335:Cd101 UTSW 3 100,926,045 (GRCm39) missense probably benign 0.01
R7565:Cd101 UTSW 3 100,926,108 (GRCm39) missense probably benign 0.00
R7880:Cd101 UTSW 3 100,915,182 (GRCm39) missense probably benign 0.00
R8121:Cd101 UTSW 3 100,927,898 (GRCm39) missense probably damaging 1.00
R8233:Cd101 UTSW 3 100,900,989 (GRCm39) missense unknown
R8900:Cd101 UTSW 3 100,926,062 (GRCm39) missense probably benign 0.19
R8960:Cd101 UTSW 3 100,910,817 (GRCm39) missense probably benign 0.01
R9260:Cd101 UTSW 3 100,920,599 (GRCm39) missense probably benign 0.16
R9335:Cd101 UTSW 3 100,915,431 (GRCm39) missense probably benign 0.18
R9663:Cd101 UTSW 3 100,911,222 (GRCm39) missense probably benign 0.21
X0018:Cd101 UTSW 3 100,925,948 (GRCm39) missense possibly damaging 0.95
X0023:Cd101 UTSW 3 100,926,171 (GRCm39) missense probably benign
X0058:Cd101 UTSW 3 100,927,737 (GRCm39) missense probably damaging 1.00
Z1177:Cd101 UTSW 3 100,924,456 (GRCm39) missense probably benign 0.02
Z1177:Cd101 UTSW 3 100,919,232 (GRCm39) missense probably benign 0.03
Predicted Primers PCR Primer
(F):5'- AAGCTTGTCCAGCCGTACATCACC -3'
(R):5'- GAGCCACTCACTCTGCAAAGTTCC -3'

Sequencing Primer
(F):5'- ACAAACCTGTCTGCATAGGAG -3'
(R):5'- GTTCCTATGCTCTCTCAGCAAAAAG -3'
Posted On 2014-04-13