Mutagenetix > Incidental Mutation

Incidental Mutation 'R1641:Or9r3'

173544

Institutional Source

Beutler Lab

Gene Symbol

Or9r3

Ensembl Gene

ENSMUSG00000096747

Gene Name

olfactory receptor family 9 subfamily R member 3

Synonyms

Olfr823, MOR210-4, GA_x6K02T2PULF-11783479-11782532

MMRRC Submission

039677-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.081) question?

Stock #

R1641 (G1)

Quality Score

198

Status

Not validated

Chromosome

Chromosomal Location

129947710-129948657 bp(-) (GRCm39)

Type of Mutation

nonsense

DNA Base Change (assembly)

A to T at 129947872 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Stop codon at position 262 (Y262*)

Ref Sequence

ENSEMBL: ENSMUSP00000150794 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000081469] [ENSMUST00000213145]

AlphaFold

Q7TRH2

Predicted Effect

probably null
Transcript: ENSMUST00000081469
AA Change: Y262*

SMART Domains

Protein: ENSMUSP00000080189
Gene: ENSMUSG00000096747
AA Change: Y262*

Domain	Start	End	E-Value	Type
Pfam:7tm_4	34	311	1.6e-54	PFAM
Pfam:7tm_1	44	293	7.6e-21	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000213145
AA Change: Y262*

Coding Region Coverage

1x: 99.0%
3x: 98.0%
10x: 95.3%
20x: 89.3%

Validation Efficiency

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 56 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aasdh	T	A	5: 77,039,626 (GRCm39)	T228S	probably benign	Het
Adamts2	C	T	11: 50,683,612 (GRCm39)	P965S	probably damaging	Het
Ankrd11	A	G	8: 123,618,485 (GRCm39)	I1768T	probably benign	Het
Arsi	G	A	18: 61,049,723 (GRCm39)	G202E	probably benign	Het
Baz2b	A	T	2: 59,743,234 (GRCm39)	L1579Q	probably damaging	Het
Btbd7	A	G	12: 102,757,034 (GRCm39)	V684A	probably damaging	Het
Camk1g	T	A	1: 193,038,665 (GRCm39)	I86F	probably benign	Het
Capn13	A	T	17: 73,689,889 (GRCm39)	S41T	possibly damaging	Het
Cep192	C	A	18: 67,980,504 (GRCm39)	L1422I	probably damaging	Het
Chaf1a	T	C	17: 56,354,380 (GRCm39)	F217L	unknown	Het
Clca3b	A	T	3: 144,529,274 (GRCm39)	M800K	possibly damaging	Het
Cplane1	A	G	15: 8,258,443 (GRCm39)	T2230A	probably benign	Het
Crocc	A	G	4: 140,744,388 (GRCm39)	V1836A	probably benign	Het
Csmd2	G	A	4: 128,377,188 (GRCm39)	V2023M	possibly damaging	Het
Cul9	A	G	17: 46,854,486 (GRCm39)	V72A	possibly damaging	Het
Ddx52	T	C	11: 83,834,269 (GRCm39)		probably null	Het
Dennd5b	A	C	6: 148,969,703 (GRCm39)	V250G	probably damaging	Het
Fabp3	C	T	4: 130,206,180 (GRCm39)	T57I	probably benign	Het
Gtpbp4	A	T	13: 9,023,285 (GRCm39)	M593K	probably benign	Het
Il21	A	G	3: 37,286,681 (GRCm39)	F12L	probably benign	Het
Lrit2	T	A	14: 36,791,105 (GRCm39)	N261K	probably benign	Het
Lrrc39	G	T	3: 116,364,562 (GRCm39)	C151F	probably damaging	Het
Lsm14a	C	A	7: 34,050,799 (GRCm39)	R426L	probably damaging	Het
Maml1	G	A	11: 50,157,774 (GRCm39)	P134S	probably benign	Het
Map3k13	T	C	16: 21,722,542 (GRCm39)	C235R	probably damaging	Het
Naip2	C	T	13: 100,298,489 (GRCm39)	A516T	possibly damaging	Het
Nsmaf	T	C	4: 6,409,884 (GRCm39)	E663G	probably benign	Het
Ntrk3	T	C	7: 78,005,822 (GRCm39)	N513S	probably damaging	Het
Nufip1	T	G	14: 76,363,692 (GRCm39)	N305K	possibly damaging	Het
Or10al5	C	T	17: 38,062,916 (GRCm39)	T57I	possibly damaging	Het
Or2ag1b	T	A	7: 106,288,918 (GRCm39)	T7S	probably benign	Het
Or4c10b	A	T	2: 89,711,745 (GRCm39)	T192S	probably benign	Het
Or51a6	T	A	7: 102,604,175 (GRCm39)	D218V	probably benign	Het
Pi4ka	A	G	16: 17,194,894 (GRCm39)	V168A	probably benign	Het
Prex2	T	C	1: 11,301,996 (GRCm39)	V1433A	probably damaging	Het
Prl7a1	A	T	13: 27,817,612 (GRCm39)	D217E	probably damaging	Het
Prr3	G	A	17: 36,285,484 (GRCm39)	R86*	probably null	Het
Ptprz1	T	C	6: 23,049,605 (GRCm39)	F1350L	probably damaging	Het
R3hcc1l	T	C	19: 42,552,046 (GRCm39)	S348P	possibly damaging	Het
Rag2	A	T	2: 101,459,960 (GRCm39)	Q90L	probably benign	Het
Scel	T	C	14: 103,770,752 (GRCm39)	L62P	probably damaging	Het
Serpini1	A	T	3: 75,521,977 (GRCm39)	E156V	possibly damaging	Het
Skint4	T	A	4: 111,993,240 (GRCm39)	I321K	possibly damaging	Het
Slc28a2	A	G	2: 122,286,098 (GRCm39)	D478G	probably damaging	Het
Sppl2b	G	T	10: 80,700,965 (GRCm39)	V164F	probably damaging	Het
Traf5	T	A	1: 191,729,470 (GRCm39)	N527I	probably benign	Het
Ttc3	T	A	16: 94,244,176 (GRCm39)	D17E	probably benign	Het
Txlnb	G	A	10: 17,682,521 (GRCm39)	A148T	possibly damaging	Het
Ubtf	A	G	11: 102,201,757 (GRCm39)	Y256H	probably damaging	Het
Usp25	T	C	16: 76,868,559 (GRCm39)	F320S	possibly damaging	Het
Utp14b	T	C	1: 78,643,656 (GRCm39)	V518A	probably benign	Het
Utp20	A	G	10: 88,593,834 (GRCm39)	V2192A	possibly damaging	Het
Vmn1r173	T	A	7: 23,402,533 (GRCm39)	M256K	probably benign	Het
Vmn2r114	T	A	17: 23,515,962 (GRCm39)	M510L	probably benign	Het
Xdh	T	A	17: 74,233,547 (GRCm39)	Q189L	probably benign	Het
Zfat	C	T	15: 68,051,959 (GRCm39)	A605T	probably benign	Het

Other mutations in Or9r3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02728:Or9r3	APN	10	129,948,487 (GRCm39)	missense	probably damaging	1.00
R0472:Or9r3	UTSW	10	129,948,449 (GRCm39)	missense	probably damaging	1.00
R0609:Or9r3	UTSW	10	129,948,449 (GRCm39)	missense	probably damaging	1.00
R1619:Or9r3	UTSW	10	129,948,548 (GRCm39)	missense	possibly damaging	0.89
R2057:Or9r3	UTSW	10	129,947,859 (GRCm39)	missense	probably benign	0.00
R6049:Or9r3	UTSW	10	129,948,481 (GRCm39)	missense	probably benign	0.01
R6638:Or9r3	UTSW	10	129,947,739 (GRCm39)	missense	probably benign	0.04
R7291:Or9r3	UTSW	10	129,948,093 (GRCm39)	missense	probably benign	0.07
R7602:Or9r3	UTSW	10	129,948,179 (GRCm39)	missense	probably benign	0.00
R8167:Or9r3	UTSW	10	129,948,350 (GRCm39)	missense	probably damaging	1.00
R8815:Or9r3	UTSW	10	129,947,808 (GRCm39)	missense	probably damaging	0.98
R9169:Or9r3	UTSW	10	129,947,723 (GRCm39)	missense	probably benign	0.04
R9647:Or9r3	UTSW	10	129,948,029 (GRCm39)	missense	probably damaging	0.99
X0022:Or9r3	UTSW	10	129,948,576 (GRCm39)	missense	probably benign

Predicted Primers

PCR Primer
(F):5'- TTCCATAAATGCCTGATGATGTGGCTT -3'
(R):5'- TCTGTGATGTCCCAGCTCTGATCAA -3'

Sequencing Primer
(F):5'- TTTCAGGTTGAAGGAAACTGAAAGTC -3'
(R):5'- CTCTGATCAAGATCTCATGTGTTG -3'

Posted On

2014-04-24