Mutagenetix > Incidental Mutation

Incidental Mutation 'R1591:Chd9'

175500

Institutional Source

Beutler Lab

Gene Symbol

Chd9

Ensembl Gene

ENSMUSG00000056608

Gene Name

chromodomain helicase DNA binding protein 9

Synonyms

AD013, 1810014J18Rik, 9030205D12Rik, A330063D19Rik

MMRRC Submission

039628-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R1591 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

91554980-91781144 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 91710166 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Glycine at position 314 (D314G)

Ref Sequence

ENSEMBL: ENSMUSP00000147741 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000048665] [ENSMUST00000109614] [ENSMUST00000209203] [ENSMUST00000209423] [ENSMUST00000210947]

AlphaFold

no structure available at present

Predicted Effect

unknown
Transcript: ENSMUST00000048665
AA Change: D787G

SMART Domains

Protein: ENSMUSP00000046356
Gene: ENSMUSG00000056608
AA Change: D787G

Domain	Start	End	E-Value	Type
low complexity region	323	334	N/A	INTRINSIC
low complexity region	586	605	N/A	INTRINSIC
CHROMO	687	753	2.41e-10	SMART
CHROMO	770	828	4.35e-8	SMART
DEXDc	855	1056	3.8e-36	SMART
Blast:DEXDc	1149	1174	7e-6	BLAST
HELICc	1211	1295	2.86e-22	SMART
low complexity region	1462	1475	N/A	INTRINSIC
Blast:DEXDc	1506	1551	3e-16	BLAST
low complexity region	2048	2067	N/A	INTRINSIC
low complexity region	2127	2199	N/A	INTRINSIC
BRK	2456	2505	6.77e-25	SMART
BRK	2530	2574	1.5e-17	SMART
low complexity region	2594	2608	N/A	INTRINSIC
low complexity region	2609	2639	N/A	INTRINSIC
low complexity region	2642	2659	N/A	INTRINSIC
low complexity region	2690	2704	N/A	INTRINSIC
low complexity region	2746	2771	N/A	INTRINSIC
low complexity region	2802	2813	N/A	INTRINSIC
low complexity region	2843	2869	N/A	INTRINSIC

Predicted Effect

unknown
Transcript: ENSMUST00000109614
AA Change: D787G

SMART Domains

Protein: ENSMUSP00000105243
Gene: ENSMUSG00000056608
AA Change: D787G

Domain	Start	End	E-Value	Type
low complexity region	323	334	N/A	INTRINSIC
low complexity region	586	605	N/A	INTRINSIC
CHROMO	687	753	2.41e-10	SMART
CHROMO	770	828	4.35e-8	SMART
DEXDc	855	1056	3.8e-36	SMART
Blast:DEXDc	1149	1174	7e-6	BLAST
HELICc	1211	1295	2.86e-22	SMART
low complexity region	1462	1475	N/A	INTRINSIC
Blast:DEXDc	1506	1551	3e-16	BLAST
low complexity region	2048	2067	N/A	INTRINSIC
low complexity region	2127	2199	N/A	INTRINSIC
BRK	2472	2521	6.77e-25	SMART
BRK	2546	2590	1.5e-17	SMART
low complexity region	2610	2624	N/A	INTRINSIC
low complexity region	2625	2655	N/A	INTRINSIC
low complexity region	2658	2675	N/A	INTRINSIC
low complexity region	2706	2720	N/A	INTRINSIC
low complexity region	2762	2787	N/A	INTRINSIC
low complexity region	2818	2829	N/A	INTRINSIC
low complexity region	2859	2885	N/A	INTRINSIC

Predicted Effect

possibly damaging
Transcript: ENSMUST00000209203
AA Change: D787G

PolyPhen 2 Score 0.944 (Sensitivity: 0.80; Specificity: 0.95)

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000209341

Predicted Effect

unknown
Transcript: ENSMUST00000209423
AA Change: D787G

Predicted Effect

probably damaging
Transcript: ENSMUST00000210947
AA Change: D314G

PolyPhen 2 Score 0.973 (Sensitivity: 0.76; Specificity: 0.96)

Meta Mutation Damage Score

0.1885

Coding Region Coverage

1x: 99.0%
3x: 98.1%
10x: 95.5%
20x: 89.7%

Validation Efficiency

100% (80/80)

Allele List at MGI

Other mutations in this stock

Total: 75 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abraxas1	G	T	5: 100,957,505 (GRCm39)	Q201K	probably benign	Het
Acacb	A	T	5: 114,341,484 (GRCm39)	I829F	possibly damaging	Het
Acvr1b	G	T	15: 101,091,905 (GRCm39)	V62L	probably benign	Het
Adam6b	A	T	12: 113,453,452 (GRCm39)	I90F	probably benign	Het
Adgrf1	T	C	17: 43,621,872 (GRCm39)	L703P	probably damaging	Het
Arf3	T	C	15: 98,640,669 (GRCm39)		probably benign	Het
Asns	T	C	6: 7,678,007 (GRCm39)	D357G	probably damaging	Het
Atr	T	C	9: 95,827,438 (GRCm39)	M2461T	probably damaging	Het
B3galt4	G	A	17: 34,169,813 (GRCm39)	R142C	probably damaging	Het
Bod1l	T	C	5: 41,976,563 (GRCm39)	I1584V	probably benign	Het
Bub3	T	C	7: 131,163,337 (GRCm39)		probably null	Het
Camkk2	A	G	5: 122,895,621 (GRCm39)		probably null	Het
Cand1	G	T	10: 119,047,774 (GRCm39)	T572K	possibly damaging	Het
Caprin2	A	T	6: 148,774,606 (GRCm39)	S235R	possibly damaging	Het
Cdh24	T	C	14: 54,873,799 (GRCm39)	T452A	probably benign	Het
Cdh4	T	C	2: 179,528,657 (GRCm39)		probably null	Het
Cfap61	A	G	2: 145,987,378 (GRCm39)	R1060G	probably benign	Het
Cplx3	C	T	9: 57,523,085 (GRCm39)	V125I	probably benign	Het
Csmd1	T	A	8: 15,950,710 (GRCm39)	I3500F	probably damaging	Het
Dnah1	G	T	14: 30,994,289 (GRCm39)	Q2858K	probably benign	Het
Dnah6	C	T	6: 73,053,583 (GRCm39)	E2884K	probably benign	Het
Ecm1	G	A	3: 95,643,275 (GRCm39)	R342C	probably damaging	Het
Exosc10	T	A	4: 148,652,840 (GRCm39)	I485N	probably benign	Het
Fap	T	C	2: 62,384,201 (GRCm39)	K2E	probably damaging	Het
Fgfr1	G	A	8: 26,062,736 (GRCm39)	G671D	probably damaging	Het
Fzr1	C	T	10: 81,206,201 (GRCm39)	R162Q	possibly damaging	Het
Grap2	A	T	15: 80,532,649 (GRCm39)	Y272F	probably damaging	Het
Il11ra1	T	A	4: 41,766,200 (GRCm39)	W246R	probably damaging	Het
Kcna3	A	T	3: 106,944,345 (GRCm39)	I203F	probably damaging	Het
Kcng1	T	C	2: 168,110,630 (GRCm39)	E178G	possibly damaging	Het
Kif19a	A	C	11: 114,680,057 (GRCm39)	H798P	probably benign	Het
Kif21b	T	C	1: 136,077,055 (GRCm39)	L359P	probably damaging	Het
Krt6a	A	T	15: 101,600,792 (GRCm39)		probably null	Het
Lrp1	C	T	10: 127,441,475 (GRCm39)	S216N	probably benign	Het
Lrp3	A	G	7: 34,901,790 (GRCm39)	V676A	probably benign	Het
Lrrc63	T	A	14: 75,363,332 (GRCm39)	K266N	possibly damaging	Het
Mccc1	C	T	3: 36,044,006 (GRCm39)	V246M	probably damaging	Het
Mdn1	T	C	4: 32,700,092 (GRCm39)	V1395A	possibly damaging	Het
Mmrn1	A	T	6: 60,921,755 (GRCm39)	R71*	probably null	Het
Mrps2	C	T	2: 28,359,500 (GRCm39)	A119V	probably benign	Het
Ogdh	T	C	11: 6,299,384 (GRCm39)	F750S	probably damaging	Het
Or1ak2	C	A	2: 36,827,990 (GRCm39)	N286K	probably damaging	Het
Or51aa2	T	G	7: 103,188,274 (GRCm39)	T56P	probably benign	Het
Or5p60	T	A	7: 107,723,571 (GRCm39)	I300F	possibly damaging	Het
Or8b3	A	G	9: 38,314,232 (GRCm39)	T18A	probably damaging	Het
Or8b42	A	T	9: 38,341,707 (GRCm39)	N43I	probably damaging	Het
Osbpl11	A	C	16: 33,030,353 (GRCm39)	I194L	probably benign	Het
Pacsin2	T	C	15: 83,269,252 (GRCm39)	E14G	probably damaging	Het
Pate7	T	C	9: 35,687,952 (GRCm39)	D96G	probably damaging	Het
Pcdh7	A	G	5: 57,877,764 (GRCm39)	T440A	probably damaging	Het
Pcdhb17	T	C	18: 37,618,878 (GRCm39)	S223P	probably damaging	Het
Pik3c2g	G	A	6: 139,693,904 (GRCm39)	R109K	probably benign	Het
Ppp2ca	T	C	11: 51,989,916 (GRCm39)	I14T	possibly damaging	Het
Rdh12	A	T	12: 79,258,278 (GRCm39)	T102S	probably damaging	Het
Rsf1	T	A	7: 97,288,520 (GRCm39)	C132*	probably null	Het
Rufy1	G	A	11: 50,285,755 (GRCm39)	L621F	probably damaging	Het
Ruvbl2	C	T	7: 45,074,135 (GRCm39)	R253H	possibly damaging	Het
Sdf2	A	G	11: 78,145,819 (GRCm39)	E172G	probably damaging	Het
Skint5	C	T	4: 113,856,651 (GRCm39)		probably null	Het
Slc25a27	A	G	17: 43,964,315 (GRCm39)	I185T	probably benign	Het
Slc41a3	A	C	6: 90,610,677 (GRCm39)	K180Q	probably benign	Het
Slc7a14	A	C	3: 31,291,598 (GRCm39)	F227V	probably damaging	Het
Smg1	T	C	7: 117,756,142 (GRCm39)		probably benign	Het
St6galnac1	A	T	11: 116,656,689 (GRCm39)	D483E	probably damaging	Het
Tes	A	G	6: 17,097,441 (GRCm39)	K183R	probably damaging	Het
Tgfbr1	G	T	4: 47,403,471 (GRCm39)	D290Y	probably damaging	Het
Tifab	T	A	13: 56,324,164 (GRCm39)	Y93F	probably benign	Het
Tmem131l	A	G	3: 83,848,196 (GRCm39)		probably null	Het
Tnfrsf21	T	A	17: 43,396,265 (GRCm39)	S516R	probably benign	Het
Ttn	T	C	2: 76,606,389 (GRCm39)	Y18140C	probably damaging	Het
Unc13b	T	A	4: 43,244,747 (GRCm39)	S3692T	probably damaging	Het
Vwa8	C	T	14: 79,145,670 (GRCm39)	R116C	probably damaging	Het
Zfp113	T	C	5: 138,149,459 (GRCm39)		probably benign	Het
Zfp26	T	C	9: 20,348,921 (GRCm39)	T548A	probably benign	Het
Zfp870	C	T	17: 33,102,990 (GRCm39)	G114D	probably damaging	Het

Other mutations in Chd9

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00420:Chd9	APN	8	91,752,020 (GRCm39)	missense	possibly damaging	0.79
IGL00547:Chd9	APN	8	91,732,426 (GRCm39)	missense	probably damaging	1.00
IGL00589:Chd9	APN	8	91,742,474 (GRCm39)	missense	probably damaging	1.00
IGL00640:Chd9	APN	8	91,712,760 (GRCm39)	missense	probably damaging	0.99
IGL00663:Chd9	APN	8	91,710,118 (GRCm39)	missense	probably damaging	1.00
IGL00852:Chd9	APN	8	91,699,835 (GRCm39)	missense	probably benign	0.29
IGL00908:Chd9	APN	8	91,723,508 (GRCm39)	missense	probably damaging	1.00
IGL00911:Chd9	APN	8	91,778,320 (GRCm39)	missense	probably damaging	1.00
IGL01068:Chd9	APN	8	91,768,744 (GRCm39)	missense	probably benign	0.13
IGL01668:Chd9	APN	8	91,753,404 (GRCm39)	missense	possibly damaging	0.53
IGL01873:Chd9	APN	8	91,660,395 (GRCm39)	missense	probably benign	0.00
IGL01969:Chd9	APN	8	91,760,138 (GRCm39)	missense	possibly damaging	0.72
IGL02105:Chd9	APN	8	91,659,116 (GRCm39)	missense	probably damaging	1.00
IGL02153:Chd9	APN	8	91,683,122 (GRCm39)	nonsense	probably null
IGL02164:Chd9	APN	8	91,659,849 (GRCm39)	missense	possibly damaging	0.94
IGL02725:Chd9	APN	8	91,778,312 (GRCm39)	missense	possibly damaging	0.78
IGL02755:Chd9	APN	8	91,760,210 (GRCm39)	missense	probably benign	0.33
IGL02892:Chd9	APN	8	91,703,543 (GRCm39)	splice site	probably benign
IGL02897:Chd9	APN	8	91,660,496 (GRCm39)	splice site	probably benign
IGL03005:Chd9	APN	8	91,738,075 (GRCm39)	missense	probably damaging	0.98
IGL03062:Chd9	APN	8	91,741,895 (GRCm39)	splice site	probably benign
IGL03140:Chd9	APN	8	91,768,856 (GRCm39)	missense	possibly damaging	0.91
hovel	UTSW	8	91,741,832 (GRCm39)	missense	probably benign	0.19
shack	UTSW	8	91,659,426 (GRCm39)	missense	probably damaging	1.00
R0056:Chd9	UTSW	8	91,660,165 (GRCm39)	missense	possibly damaging	0.62
R0157:Chd9	UTSW	8	91,735,464 (GRCm39)	splice site	probably null
R0238:Chd9	UTSW	8	91,659,456 (GRCm39)	missense	probably damaging	1.00
R0238:Chd9	UTSW	8	91,659,456 (GRCm39)	missense	probably damaging	1.00
R0432:Chd9	UTSW	8	91,721,078 (GRCm39)	splice site	probably benign
R0454:Chd9	UTSW	8	91,699,859 (GRCm39)	missense	possibly damaging	0.83
R0573:Chd9	UTSW	8	91,725,223 (GRCm39)	missense	probably damaging	1.00
R0580:Chd9	UTSW	8	91,721,191 (GRCm39)	missense	possibly damaging	0.91
R0604:Chd9	UTSW	8	91,763,170 (GRCm39)	missense	possibly damaging	0.82
R0662:Chd9	UTSW	8	91,704,304 (GRCm39)	missense	probably damaging	0.99
R0825:Chd9	UTSW	8	91,777,825 (GRCm39)	missense	probably benign	0.06
R0945:Chd9	UTSW	8	91,659,630 (GRCm39)	missense	possibly damaging	0.60
R0964:Chd9	UTSW	8	91,741,832 (GRCm39)	missense	probably benign	0.19
R0967:Chd9	UTSW	8	91,716,107 (GRCm39)	missense	probably damaging	1.00
R1015:Chd9	UTSW	8	91,659,206 (GRCm39)	missense	probably damaging	0.99
R1066:Chd9	UTSW	8	91,712,764 (GRCm39)	nonsense	probably null
R1244:Chd9	UTSW	8	91,749,557 (GRCm39)	missense	probably damaging	0.99
R1505:Chd9	UTSW	8	91,733,123 (GRCm39)	splice site	probably null
R1570:Chd9	UTSW	8	91,763,170 (GRCm39)	missense	probably benign	0.03
R1624:Chd9	UTSW	8	91,725,163 (GRCm39)	missense	probably benign	0.17
R1626:Chd9	UTSW	8	91,721,224 (GRCm39)	missense	probably benign	0.00
R1632:Chd9	UTSW	8	91,683,335 (GRCm39)	nonsense	probably null
R1649:Chd9	UTSW	8	91,659,229 (GRCm39)	missense	possibly damaging	0.88
R1664:Chd9	UTSW	8	91,749,418 (GRCm39)	splice site	probably null
R1668:Chd9	UTSW	8	91,767,814 (GRCm39)	missense	probably damaging	0.99
R1681:Chd9	UTSW	8	91,699,763 (GRCm39)	missense	probably damaging	0.98
R1695:Chd9	UTSW	8	91,728,410 (GRCm39)	missense	probably damaging	1.00
R1714:Chd9	UTSW	8	91,760,853 (GRCm39)	utr 3 prime	probably benign
R1746:Chd9	UTSW	8	91,737,326 (GRCm39)	missense	probably benign	0.01
R1843:Chd9	UTSW	8	91,737,422 (GRCm39)	missense	probably benign	0.19
R1844:Chd9	UTSW	8	91,683,323 (GRCm39)	nonsense	probably null
R1941:Chd9	UTSW	8	91,703,697 (GRCm39)	critical splice donor site	probably null
R2022:Chd9	UTSW	8	91,761,682 (GRCm39)	missense	probably benign	0.17
R2027:Chd9	UTSW	8	91,634,619 (GRCm39)	unclassified	probably benign
R2098:Chd9	UTSW	8	91,760,615 (GRCm39)	missense	probably benign	0.01
R2099:Chd9	UTSW	8	91,760,615 (GRCm39)	missense	probably benign	0.01
R2100:Chd9	UTSW	8	91,760,615 (GRCm39)	missense	probably benign	0.01
R2101:Chd9	UTSW	8	91,760,615 (GRCm39)	missense	probably benign	0.01
R2224:Chd9	UTSW	8	91,737,913 (GRCm39)	missense	probably benign	0.04
R2276:Chd9	UTSW	8	91,760,615 (GRCm39)	missense	probably benign	0.01
R2278:Chd9	UTSW	8	91,760,615 (GRCm39)	missense	probably benign	0.01
R2316:Chd9	UTSW	8	91,777,756 (GRCm39)	missense	probably damaging	0.99
R2507:Chd9	UTSW	8	91,760,615 (GRCm39)	missense	probably benign	0.01
R2508:Chd9	UTSW	8	91,760,615 (GRCm39)	missense	probably benign	0.01
R2988:Chd9	UTSW	8	91,757,088 (GRCm39)	splice site	probably null
R3418:Chd9	UTSW	8	91,763,219 (GRCm39)	missense	probably damaging	1.00
R3817:Chd9	UTSW	8	91,710,893 (GRCm39)	splice site	probably benign
R3923:Chd9	UTSW	8	91,660,147 (GRCm39)	missense	probably benign	0.16
R4001:Chd9	UTSW	8	91,683,185 (GRCm39)	missense	probably damaging	1.00
R4003:Chd9	UTSW	8	91,683,185 (GRCm39)	missense	probably damaging	1.00
R4006:Chd9	UTSW	8	91,660,188 (GRCm39)	missense	probably benign	0.12
R4013:Chd9	UTSW	8	91,699,797 (GRCm39)	missense	possibly damaging	0.82
R4067:Chd9	UTSW	8	91,750,202 (GRCm39)	missense	possibly damaging	0.53
R4108:Chd9	UTSW	8	91,737,304 (GRCm39)	missense	probably benign	0.04
R4125:Chd9	UTSW	8	91,777,912 (GRCm39)	missense	probably damaging	0.99
R4126:Chd9	UTSW	8	91,777,912 (GRCm39)	missense	probably damaging	0.99
R4452:Chd9	UTSW	8	91,704,308 (GRCm39)	missense	probably damaging	0.99
R4463:Chd9	UTSW	8	91,705,627 (GRCm39)	missense	probably benign	0.01
R4478:Chd9	UTSW	8	91,760,659 (GRCm39)	utr 3 prime	probably benign
R4587:Chd9	UTSW	8	91,763,134 (GRCm39)	missense	possibly damaging	0.95
R4628:Chd9	UTSW	8	91,710,091 (GRCm39)	missense	probably benign	0.05
R4667:Chd9	UTSW	8	91,760,428 (GRCm39)	missense	possibly damaging	0.73
R4908:Chd9	UTSW	8	91,741,877 (GRCm39)	missense	possibly damaging	0.50
R4912:Chd9	UTSW	8	91,760,858 (GRCm39)	missense	possibly damaging	0.84
R4977:Chd9	UTSW	8	91,760,336 (GRCm39)	missense	possibly damaging	0.96
R5016:Chd9	UTSW	8	91,733,254 (GRCm39)	nonsense	probably null
R5083:Chd9	UTSW	8	91,711,002 (GRCm39)	missense	probably damaging	1.00
R5088:Chd9	UTSW	8	91,704,147 (GRCm39)	missense	possibly damaging	0.94
R5090:Chd9	UTSW	8	91,753,462 (GRCm39)	nonsense	probably null
R5307:Chd9	UTSW	8	91,723,777 (GRCm39)	missense	probably damaging	1.00
R5541:Chd9	UTSW	8	91,778,132 (GRCm39)	missense	probably benign	0.09
R5559:Chd9	UTSW	8	91,742,553 (GRCm39)	critical splice donor site	probably null
R5638:Chd9	UTSW	8	91,738,078 (GRCm39)	missense	possibly damaging	0.67
R5640:Chd9	UTSW	8	91,763,190 (GRCm39)	missense	probably damaging	1.00
R5793:Chd9	UTSW	8	91,728,384 (GRCm39)	missense	probably damaging	1.00
R5827:Chd9	UTSW	8	91,716,078 (GRCm39)	missense	probably damaging	1.00
R5834:Chd9	UTSW	8	91,723,792 (GRCm39)	missense	probably damaging	1.00
R5875:Chd9	UTSW	8	91,778,464 (GRCm39)	missense	probably damaging	0.99
R6002:Chd9	UTSW	8	91,705,515 (GRCm39)	missense	probably damaging	1.00
R6091:Chd9	UTSW	8	91,761,691 (GRCm39)	missense	probably damaging	1.00
R6185:Chd9	UTSW	8	91,775,765 (GRCm39)	missense	probably damaging	1.00
R6246:Chd9	UTSW	8	91,659,045 (GRCm39)	missense	probably damaging	1.00
R6292:Chd9	UTSW	8	91,659,550 (GRCm39)	missense	probably benign	0.05
R6305:Chd9	UTSW	8	91,757,174 (GRCm39)	missense	possibly damaging	0.93
R6348:Chd9	UTSW	8	91,737,903 (GRCm39)	missense	possibly damaging	0.95
R6438:Chd9	UTSW	8	91,725,149 (GRCm39)	missense	probably benign	0.02
R6470:Chd9	UTSW	8	91,659,426 (GRCm39)	missense	probably damaging	1.00
R6798:Chd9	UTSW	8	91,778,182 (GRCm39)	missense	possibly damaging	0.56
R6902:Chd9	UTSW	8	91,769,579 (GRCm39)	missense	probably damaging	1.00
R6908:Chd9	UTSW	8	91,683,044 (GRCm39)	missense	probably benign	0.02
R6929:Chd9	UTSW	8	91,769,573 (GRCm39)	missense	probably damaging	1.00
R6969:Chd9	UTSW	8	91,705,542 (GRCm39)	missense	probably benign	0.34
R7043:Chd9	UTSW	8	91,760,843 (GRCm39)	utr 3 prime	probably benign
R7094:Chd9	UTSW	8	91,716,189 (GRCm39)	missense	unknown
R7126:Chd9	UTSW	8	91,741,853 (GRCm39)	missense	unknown
R7182:Chd9	UTSW	8	91,733,250 (GRCm39)	missense	unknown
R7219:Chd9	UTSW	8	91,728,394 (GRCm39)	missense	unknown
R7260:Chd9	UTSW	8	91,721,171 (GRCm39)	missense	unknown
R7293:Chd9	UTSW	8	91,760,707 (GRCm39)	missense	unknown
R7303:Chd9	UTSW	8	91,778,532 (GRCm39)	missense	unknown
R7358:Chd9	UTSW	8	91,760,846 (GRCm39)	missense	unknown
R7358:Chd9	UTSW	8	91,710,115 (GRCm39)	missense	unknown
R7451:Chd9	UTSW	8	91,760,446 (GRCm39)	missense	probably benign	0.27
R7451:Chd9	UTSW	8	91,760,418 (GRCm39)	frame shift	probably null
R7456:Chd9	UTSW	8	91,659,153 (GRCm39)	nonsense	probably null
R7481:Chd9	UTSW	8	91,683,066 (GRCm39)	missense	unknown
R7532:Chd9	UTSW	8	91,721,193 (GRCm39)	missense	unknown
R7570:Chd9	UTSW	8	91,721,208 (GRCm39)	missense	unknown
R7611:Chd9	UTSW	8	91,763,017 (GRCm39)	missense	probably damaging	1.00
R7673:Chd9	UTSW	8	91,778,325 (GRCm39)	missense	probably damaging	0.96
R7723:Chd9	UTSW	8	91,741,837 (GRCm39)	missense	unknown
R7739:Chd9	UTSW	8	91,761,653 (GRCm39)	missense	probably damaging	1.00
R7759:Chd9	UTSW	8	91,704,178 (GRCm39)	critical splice donor site	probably null
R7916:Chd9	UTSW	8	91,761,684 (GRCm39)	nonsense	probably null
R7921:Chd9	UTSW	8	91,768,909 (GRCm39)	critical splice donor site	probably null
R7957:Chd9	UTSW	8	91,778,326 (GRCm39)	missense	probably damaging	0.99
R7972:Chd9	UTSW	8	91,732,395 (GRCm39)	missense	unknown
R8108:Chd9	UTSW	8	91,659,852 (GRCm39)	missense	unknown
R8115:Chd9	UTSW	8	91,762,960 (GRCm39)	missense	probably damaging	0.99
R8165:Chd9	UTSW	8	91,767,769 (GRCm39)	missense	probably damaging	1.00
R8171:Chd9	UTSW	8	91,752,015 (GRCm39)	missense	possibly damaging	0.92
R8186:Chd9	UTSW	8	91,725,233 (GRCm39)	missense	unknown
R8208:Chd9	UTSW	8	91,763,891 (GRCm39)	splice site	probably null
R8256:Chd9	UTSW	8	91,660,129 (GRCm39)	missense	unknown
R8281:Chd9	UTSW	8	91,763,225 (GRCm39)	missense	probably damaging	1.00
R8504:Chd9	UTSW	8	91,723,472 (GRCm39)	missense	unknown
R8836:Chd9	UTSW	8	91,767,812 (GRCm39)	missense	probably damaging	0.99
R8892:Chd9	UTSW	8	91,660,468 (GRCm39)	missense	unknown
R8985:Chd9	UTSW	8	91,721,101 (GRCm39)	missense	unknown
R9029:Chd9	UTSW	8	91,683,198 (GRCm39)	missense	unknown
R9030:Chd9	UTSW	8	91,683,198 (GRCm39)	missense	unknown
R9038:Chd9	UTSW	8	91,716,233 (GRCm39)	missense	unknown
R9081:Chd9	UTSW	8	91,704,144 (GRCm39)	nonsense	probably null
R9134:Chd9	UTSW	8	91,659,754 (GRCm39)	missense	unknown
R9205:Chd9	UTSW	8	91,757,270 (GRCm39)	missense	probably benign	0.01
R9309:Chd9	UTSW	8	91,733,319 (GRCm39)	missense	unknown
R9375:Chd9	UTSW	8	91,725,335 (GRCm39)	critical splice donor site	probably null
R9449:Chd9	UTSW	8	91,659,174 (GRCm39)	missense	unknown
R9547:Chd9	UTSW	8	91,683,186 (GRCm39)	missense	unknown
R9573:Chd9	UTSW	8	91,704,302 (GRCm39)	missense	unknown
R9576:Chd9	UTSW	8	91,659,294 (GRCm39)	missense	unknown
R9601:Chd9	UTSW	8	91,732,360 (GRCm39)	nonsense	probably null
R9613:Chd9	UTSW	8	91,683,150 (GRCm39)	nonsense	probably null
R9639:Chd9	UTSW	8	91,760,840 (GRCm39)	missense	probably null
R9718:Chd9	UTSW	8	91,712,801 (GRCm39)	missense	unknown
R9746:Chd9	UTSW	8	91,738,063 (GRCm39)	missense	unknown
R9762:Chd9	UTSW	8	91,712,741 (GRCm39)	missense	unknown
R9764:Chd9	UTSW	8	91,721,220 (GRCm39)	missense	unknown
R9790:Chd9	UTSW	8	91,760,417 (GRCm39)	missense	possibly damaging	0.82
R9791:Chd9	UTSW	8	91,760,417 (GRCm39)	missense	possibly damaging	0.82
RF007:Chd9	UTSW	8	91,760,578 (GRCm39)	missense	possibly damaging	0.66
X0065:Chd9	UTSW	8	91,763,200 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- TGCTCAGCCAGACAAGTGCATAG -3'
(R):5'- tccaagccTTAGAACCATTCTCCCA -3'

Sequencing Primer
(F):5'- CTGCTAGAGTAGGTTACCTATCAG -3'
(R):5'- tgtatattttggctacaggaatgtc -3'

Posted On

2014-04-24