Mutagenetix > Incidental Mutation

Incidental Mutation 'R1612:Glp2r'

176883

Institutional Source

Beutler Lab

Gene Symbol

Glp2r

Ensembl Gene

ENSMUSG00000049928

Gene Name

glucagon-like peptide 2 receptor

Synonyms

GLP-2, 9530092J08Rik

MMRRC Submission

039649-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R1612 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

67554877-67661979 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to T at 67633033 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Methionine at position 98 (V98M)

Ref Sequence

ENSEMBL: ENSMUSP00000021289 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000021289] [ENSMUST00000051765]

AlphaFold

Q5IXF8

Predicted Effect

possibly damaging
Transcript: ENSMUST00000021289
AA Change: V98M

PolyPhen 2 Score 0.456 (Sensitivity: 0.89; Specificity: 0.90)

SMART Domains

Protein: ENSMUSP00000021289
Gene: ENSMUSG00000049928
AA Change: V98M

Domain	Start	End	E-Value	Type
Pfam:7tm_2	17	225	4.8e-54	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000051765
AA Change: V267M

PolyPhen 2 Score 0.072 (Sensitivity: 0.94; Specificity: 0.84)

SMART Domains

Protein: ENSMUSP00000061560
Gene: ENSMUSG00000049928
AA Change: V267M

Domain	Start	End	E-Value	Type
signal peptide	1	26	N/A	INTRINSIC
Pfam:HRM	53	122	3.4e-16	PFAM
Pfam:7tm_2	137	394	1.5e-79	PFAM

Meta Mutation Damage Score

0.1795

Coding Region Coverage

1x: 99.2%
3x: 98.4%
10x: 96.6%
20x: 93.6%

Validation Efficiency

97% (69/71)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a G protein-coupled receptor that is closely related to the glucagon receptor and binds to glucagon-like peptide-2 (GLP2). Signalling through GLP2 stimulates intestinal growth and increases villus height in the small intestine, concomitant with increased crypt cell proliferation and decreased enterocyte apoptosis. [provided by RefSeq, Dec 2014]
PHENOTYPE: Mice homozygous for a null mutation display defects in Paneth cell physiology, increased small bowel bacterial loads, and increased susceptibility to small bowel injury. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 64 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930579G24Rik	A	G	3: 79,538,451 (GRCm39)	T66A	probably benign	Het
Actb	A	G	5: 142,891,350 (GRCm39)	F31S	probably damaging	Het
Adamts7	T	C	9: 90,070,750 (GRCm39)	S624P	possibly damaging	Het
Adh7	T	C	3: 137,934,642 (GRCm39)	I355T	possibly damaging	Het
Arhgef40	A	G	14: 52,241,538 (GRCm39)	E106G	probably damaging	Het
Brd10	A	G	19: 29,695,245 (GRCm39)	V1483A	possibly damaging	Het
Cabp7	T	C	11: 4,689,198 (GRCm39)	D149G	probably damaging	Het
Cass4	A	T	2: 172,268,998 (GRCm39)	Q362L	possibly damaging	Het
Cd14	G	A	18: 36,858,718 (GRCm39)	Q246*	probably null	Het
Cdr2l	A	C	11: 115,284,232 (GRCm39)	E189D	probably benign	Het
Col6a6	A	G	9: 105,654,748 (GRCm39)	V991A	probably damaging	Het
Coq7	A	G	7: 118,109,134 (GRCm39)	W305R	unknown	Het
Cracr2a	G	T	6: 127,580,892 (GRCm39)	G23*	probably null	Het
Dclk2	C	T	3: 86,712,946 (GRCm39)	R503Q	possibly damaging	Het
Epcam	T	C	17: 87,947,366 (GRCm39)	L40P	possibly damaging	Het
Eps8	G	A	6: 137,477,616 (GRCm39)	P531S	probably benign	Het
Faap100	C	A	11: 120,267,914 (GRCm39)	L286F	probably damaging	Het
Fabp3	C	T	4: 130,206,180 (GRCm39)	T57I	probably benign	Het
Fbn2	A	T	18: 58,194,824 (GRCm39)	C1446S	probably damaging	Het
Fmo3	A	G	1: 162,795,454 (GRCm39)	V127A	probably damaging	Het
Frem3	A	G	8: 81,341,490 (GRCm39)	D1261G	probably damaging	Het
Gabbr1	A	G	17: 37,381,561 (GRCm39)	Y775C	probably damaging	Het
Gbp11	G	T	5: 105,474,462 (GRCm39)	Q405K	possibly damaging	Het
Gdi2	T	A	13: 3,610,051 (GRCm39)	V260E	probably benign	Het
Gm13741	T	C	2: 87,486,431 (GRCm39)	Y278C	probably damaging	Het
Gm7732	G	A	17: 21,350,177 (GRCm39)		noncoding transcript	Het
Gnptab	T	A	10: 88,264,344 (GRCm39)		probably null	Het
Hbs1l	T	G	10: 21,234,734 (GRCm39)	F596V	probably damaging	Het
Krt78	A	T	15: 101,860,279 (GRCm39)		probably null	Het
Krt87	A	T	15: 101,386,092 (GRCm39)	L223Q	probably benign	Het
Lcmt2	T	C	2: 120,969,601 (GRCm39)	Y274C	probably damaging	Het
Limd1	A	G	9: 123,347,219 (GRCm39)	Y620C	probably damaging	Het
Lvrn	G	T	18: 47,027,770 (GRCm39)	A862S	probably damaging	Het
Map4k2	A	G	19: 6,393,371 (GRCm39)	E206G	probably damaging	Het
Med16	A	G	10: 79,735,079 (GRCm39)	S461P	probably damaging	Het
Mrfap1	C	A	5: 36,953,706 (GRCm39)	A78S	probably damaging	Het
Nav2	T	A	7: 49,220,959 (GRCm39)	N1715K	probably damaging	Het
Ndc1	A	G	4: 107,252,265 (GRCm39)		probably benign	Het
Ngly1	G	T	14: 16,290,867 (GRCm38)	G450*	probably null	Het
Or13c25	T	A	4: 52,911,501 (GRCm39)	M98L	probably benign	Het
Or5k3	T	C	16: 58,969,987 (GRCm39)	M258T	probably benign	Het
Pde3b	T	A	7: 114,118,791 (GRCm39)	Y643*	probably null	Het
Pdilt	T	G	7: 119,086,198 (GRCm39)	N506H	possibly damaging	Het
Pear1	C	T	3: 87,659,160 (GRCm39)		probably null	Het
Pfkp	A	T	13: 6,638,625 (GRCm39)	M582K	probably damaging	Het
Pigl	T	A	11: 62,403,820 (GRCm39)	F251I	probably benign	Het
Plk3	A	G	4: 116,989,004 (GRCm39)	Y252H	probably damaging	Het
Prdx3	A	G	19: 60,862,872 (GRCm39)	S12P	possibly damaging	Het
Prkag2	T	C	5: 25,082,026 (GRCm39)	I96V	probably benign	Het
Pwwp3a	T	A	10: 80,068,889 (GRCm39)		probably benign	Het
Rgs3	G	A	4: 62,544,172 (GRCm39)	V146M	probably damaging	Het
Serpinh1	T	C	7: 98,998,138 (GRCm39)	D164G	probably damaging	Het
Slc35d2	T	C	13: 64,259,324 (GRCm39)		probably benign	Het
Slc6a6	A	G	6: 91,718,008 (GRCm39)	N316D	probably damaging	Het
Snx14	A	T	9: 88,258,958 (GRCm39)	M973K	possibly damaging	Het
Sptan1	C	G	2: 29,893,348 (GRCm39)	R1126G	probably damaging	Het
Stpg3	T	C	2: 25,103,866 (GRCm39)	T157A	probably benign	Het
Tmem39b	A	T	4: 129,580,715 (GRCm39)	M259K	possibly damaging	Het
Tomm40l	A	T	1: 171,049,471 (GRCm39)		probably null	Het
Tsen34	G	T	7: 3,698,395 (GRCm39)	G180W	probably damaging	Het
Ube2l6	C	T	2: 84,636,717 (GRCm39)	R54W	probably damaging	Het
Vdac1	A	T	11: 52,274,897 (GRCm39)	T182S	probably benign	Het
Wdr3	T	C	3: 100,058,515 (GRCm39)		probably benign	Het
Wsb1	T	A	11: 79,139,411 (GRCm39)	Q95L	probably benign	Het

Other mutations in Glp2r

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01018:Glp2r	APN	11	67,600,470 (GRCm39)	missense	probably benign
IGL02244:Glp2r	APN	11	67,612,817 (GRCm39)	missense	probably damaging	1.00
IGL02484:Glp2r	APN	11	67,630,992 (GRCm39)	missense	possibly damaging	0.90
R0013:Glp2r	UTSW	11	67,600,538 (GRCm39)	missense	possibly damaging	0.88
R0013:Glp2r	UTSW	11	67,600,538 (GRCm39)	missense	possibly damaging	0.88
R0195:Glp2r	UTSW	11	67,600,534 (GRCm39)	missense	probably damaging	0.99
R1699:Glp2r	UTSW	11	67,648,367 (GRCm39)	missense	probably benign	0.09
R1944:Glp2r	UTSW	11	67,637,618 (GRCm39)	missense	probably benign	0.01
R3971:Glp2r	UTSW	11	67,637,641 (GRCm39)	missense	possibly damaging	0.65
R4417:Glp2r	UTSW	11	67,555,342 (GRCm39)	intron	probably benign
R4681:Glp2r	UTSW	11	67,621,453 (GRCm39)	splice site	probably null
R4914:Glp2r	UTSW	11	67,648,419 (GRCm39)	nonsense	probably null
R4918:Glp2r	UTSW	11	67,648,419 (GRCm39)	nonsense	probably null
R4938:Glp2r	UTSW	11	67,648,419 (GRCm39)	nonsense	probably null
R4940:Glp2r	UTSW	11	67,648,419 (GRCm39)	nonsense	probably null
R4941:Glp2r	UTSW	11	67,637,529 (GRCm39)	splice site	probably null
R4963:Glp2r	UTSW	11	67,648,419 (GRCm39)	nonsense	probably null
R4966:Glp2r	UTSW	11	67,648,419 (GRCm39)	nonsense	probably null
R5023:Glp2r	UTSW	11	67,631,858 (GRCm39)	missense	possibly damaging	0.82
R5121:Glp2r	UTSW	11	67,612,926 (GRCm39)	splice site	probably null
R5313:Glp2r	UTSW	11	67,648,357 (GRCm39)	missense	probably damaging	0.96
R5705:Glp2r	UTSW	11	67,600,565 (GRCm39)	missense	probably benign	0.30
R5790:Glp2r	UTSW	11	67,655,625 (GRCm39)	missense	probably damaging	1.00
R6074:Glp2r	UTSW	11	67,637,640 (GRCm39)	missense	unknown
R6595:Glp2r	UTSW	11	67,655,603 (GRCm39)	missense	probably benign	0.10
R6910:Glp2r	UTSW	11	67,621,497 (GRCm39)	missense	probably benign	0.28
R7511:Glp2r	UTSW	11	67,648,417 (GRCm39)	missense	probably damaging	0.98
R7627:Glp2r	UTSW	11	67,637,589 (GRCm39)	missense	unknown
R7681:Glp2r	UTSW	11	67,600,505 (GRCm39)	missense	probably benign	0.45
R7779:Glp2r	UTSW	11	67,600,609 (GRCm39)	nonsense	probably null
R8743:Glp2r	UTSW	11	67,612,901 (GRCm39)	missense	probably damaging	0.98
R8841:Glp2r	UTSW	11	67,653,555 (GRCm39)	missense	probably damaging	1.00
R9093:Glp2r	UTSW	11	67,621,459 (GRCm39)	nonsense	probably null
R9380:Glp2r	UTSW	11	67,637,572 (GRCm39)	missense	possibly damaging	0.67
R9576:Glp2r	UTSW	11	67,655,622 (GRCm39)	missense	probably benign	0.01
R9733:Glp2r	UTSW	11	67,648,367 (GRCm39)	missense	probably benign	0.09
Z1186:Glp2r	UTSW	11	67,635,773 (GRCm39)	missense	probably benign
Z1186:Glp2r	UTSW	11	67,661,662 (GRCm39)	missense	probably benign	0.01
Z1186:Glp2r	UTSW	11	67,600,394 (GRCm39)	missense	probably damaging	0.98
Z1186:Glp2r	UTSW	11	67,600,470 (GRCm39)	missense	probably benign
Z1186:Glp2r	UTSW	11	67,600,472 (GRCm39)	missense	probably benign
Z1186:Glp2r	UTSW	11	67,630,949 (GRCm39)	missense	probably benign	0.03
Z1186:Glp2r	UTSW	11	67,630,993 (GRCm39)	missense	probably benign
Z1186:Glp2r	UTSW	11	67,631,878 (GRCm39)	missense	probably benign
Z1186:Glp2r	UTSW	11	67,631,885 (GRCm39)	missense	probably benign	0.00
Z1186:Glp2r	UTSW	11	67,633,129 (GRCm39)	missense	probably benign
Z1187:Glp2r	UTSW	11	67,635,773 (GRCm39)	missense	probably benign
Z1187:Glp2r	UTSW	11	67,633,129 (GRCm39)	missense	probably benign
Z1187:Glp2r	UTSW	11	67,631,885 (GRCm39)	missense	probably benign	0.00
Z1187:Glp2r	UTSW	11	67,631,878 (GRCm39)	missense	probably benign
Z1187:Glp2r	UTSW	11	67,630,993 (GRCm39)	missense	probably benign
Z1187:Glp2r	UTSW	11	67,600,472 (GRCm39)	missense	probably benign
Z1187:Glp2r	UTSW	11	67,600,470 (GRCm39)	missense	probably benign
Z1187:Glp2r	UTSW	11	67,600,394 (GRCm39)	missense	probably damaging	0.98
Z1187:Glp2r	UTSW	11	67,661,662 (GRCm39)	missense	probably benign	0.01
Z1188:Glp2r	UTSW	11	67,635,773 (GRCm39)	missense	probably benign
Z1188:Glp2r	UTSW	11	67,633,129 (GRCm39)	missense	probably benign
Z1188:Glp2r	UTSW	11	67,631,885 (GRCm39)	missense	probably benign	0.00
Z1188:Glp2r	UTSW	11	67,631,878 (GRCm39)	missense	probably benign
Z1188:Glp2r	UTSW	11	67,630,993 (GRCm39)	missense	probably benign
Z1188:Glp2r	UTSW	11	67,600,472 (GRCm39)	missense	probably benign
Z1188:Glp2r	UTSW	11	67,600,470 (GRCm39)	missense	probably benign
Z1188:Glp2r	UTSW	11	67,600,394 (GRCm39)	missense	probably damaging	0.98
Z1188:Glp2r	UTSW	11	67,661,662 (GRCm39)	missense	probably benign	0.01
Z1189:Glp2r	UTSW	11	67,661,662 (GRCm39)	missense	probably benign	0.01
Z1189:Glp2r	UTSW	11	67,600,394 (GRCm39)	missense	probably damaging	0.98
Z1189:Glp2r	UTSW	11	67,631,885 (GRCm39)	missense	probably benign	0.00
Z1189:Glp2r	UTSW	11	67,635,773 (GRCm39)	missense	probably benign
Z1190:Glp2r	UTSW	11	67,633,129 (GRCm39)	missense	probably benign
Z1190:Glp2r	UTSW	11	67,631,885 (GRCm39)	missense	probably benign	0.00
Z1190:Glp2r	UTSW	11	67,631,878 (GRCm39)	missense	probably benign
Z1190:Glp2r	UTSW	11	67,630,993 (GRCm39)	missense	probably benign
Z1190:Glp2r	UTSW	11	67,630,949 (GRCm39)	missense	probably benign	0.03
Z1190:Glp2r	UTSW	11	67,600,472 (GRCm39)	missense	probably benign
Z1190:Glp2r	UTSW	11	67,600,470 (GRCm39)	missense	probably benign
Z1190:Glp2r	UTSW	11	67,600,394 (GRCm39)	missense	probably damaging	0.98
Z1190:Glp2r	UTSW	11	67,661,662 (GRCm39)	missense	probably benign	0.01
Z1190:Glp2r	UTSW	11	67,635,773 (GRCm39)	missense	probably benign
Z1191:Glp2r	UTSW	11	67,635,773 (GRCm39)	missense	probably benign
Z1191:Glp2r	UTSW	11	67,633,129 (GRCm39)	missense	probably benign
Z1191:Glp2r	UTSW	11	67,631,885 (GRCm39)	missense	probably benign	0.00
Z1191:Glp2r	UTSW	11	67,631,878 (GRCm39)	missense	probably benign
Z1191:Glp2r	UTSW	11	67,630,993 (GRCm39)	missense	probably benign
Z1191:Glp2r	UTSW	11	67,600,472 (GRCm39)	missense	probably benign
Z1191:Glp2r	UTSW	11	67,600,470 (GRCm39)	missense	probably benign
Z1191:Glp2r	UTSW	11	67,600,394 (GRCm39)	missense	probably damaging	0.98
Z1191:Glp2r	UTSW	11	67,661,662 (GRCm39)	missense	probably benign	0.01
Z1192:Glp2r	UTSW	11	67,661,662 (GRCm39)	missense	probably benign	0.01
Z1192:Glp2r	UTSW	11	67,635,773 (GRCm39)	missense	probably benign
Z1192:Glp2r	UTSW	11	67,633,129 (GRCm39)	missense	probably benign
Z1192:Glp2r	UTSW	11	67,631,885 (GRCm39)	missense	probably benign	0.00
Z1192:Glp2r	UTSW	11	67,631,878 (GRCm39)	missense	probably benign
Z1192:Glp2r	UTSW	11	67,600,472 (GRCm39)	missense	probably benign
Z1192:Glp2r	UTSW	11	67,600,470 (GRCm39)	missense	probably benign
Z1192:Glp2r	UTSW	11	67,600,394 (GRCm39)	missense	probably damaging	0.98

Predicted Primers

PCR Primer
(F):5'- GGGCATATAGCACCTATGCTTGTGAA -3'
(R):5'- TCATGTGCTGAGAGTGCCAGGA -3'

Sequencing Primer
(F):5'- ATGCACATGCATGTGCAC -3'
(R):5'- TGAGAGTGCCAGGACTCAC -3'

Posted On

2014-04-24