Mutagenetix > Incidental Mutation

Incidental Mutation 'R1585:Ncor2'

177425

Institutional Source

Beutler Lab

Gene Symbol

Ncor2

Ensembl Gene

ENSMUSG00000029478

Gene Name

nuclear receptor co-repressor 2

Synonyms

SMRTe, SMRT

MMRRC Submission

039622-MU

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R1585 (G1)

Quality Score

188

Status

Validated

Chromosome

Chromosomal Location

125094217-125256283 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 125162062 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamine to Arginine at position 404 (Q404R)

Ref Sequence

ENSEMBL: ENSMUSP00000107033 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000055256] [ENSMUST00000086083] [ENSMUST00000111393] [ENSMUST00000111394] [ENSMUST00000111398] [ENSMUST00000111402]

AlphaFold

Q9WU42

Predicted Effect

unknown
Transcript: ENSMUST00000055256
AA Change: Q404R

SMART Domains

Protein: ENSMUSP00000055954
Gene: ENSMUSG00000029478
AA Change: Q404R

Domain	Start	End	E-Value	Type
low complexity region	147	154	N/A	INTRINSIC
coiled coil region	167	207	N/A	INTRINSIC
SANT	428	476	4.42e-6	SMART
coiled coil region	494	550	N/A	INTRINSIC
SANT	607	655	1.43e-14	SMART
low complexity region	668	686	N/A	INTRINSIC
low complexity region	699	726	N/A	INTRINSIC
low complexity region	768	813	N/A	INTRINSIC
low complexity region	822	828	N/A	INTRINSIC
low complexity region	848	860	N/A	INTRINSIC
low complexity region	867	874	N/A	INTRINSIC
low complexity region	905	919	N/A	INTRINSIC
low complexity region	935	944	N/A	INTRINSIC
low complexity region	989	1000	N/A	INTRINSIC
low complexity region	1011	1025	N/A	INTRINSIC
low complexity region	1027	1043	N/A	INTRINSIC
low complexity region	1086	1096	N/A	INTRINSIC
low complexity region	1100	1116	N/A	INTRINSIC
low complexity region	1366	1380	N/A	INTRINSIC
low complexity region	1481	1497	N/A	INTRINSIC
low complexity region	1616	1622	N/A	INTRINSIC
low complexity region	1709	1726	N/A	INTRINSIC
low complexity region	1737	1754	N/A	INTRINSIC
low complexity region	1764	1776	N/A	INTRINSIC
low complexity region	1800	1807	N/A	INTRINSIC
low complexity region	1921	1939	N/A	INTRINSIC
low complexity region	1959	1975	N/A	INTRINSIC
low complexity region	2062	2076	N/A	INTRINSIC
PDB:2GPV\|I	2293	2314	8e-8	PDB
low complexity region	2324	2336	N/A	INTRINSIC
low complexity region	2433	2453	N/A	INTRINSIC

Predicted Effect

unknown
Transcript: ENSMUST00000086083
AA Change: Q404R

SMART Domains

Protein: ENSMUSP00000083250
Gene: ENSMUSG00000029478
AA Change: Q404R

Domain	Start	End	E-Value	Type
low complexity region	147	154	N/A	INTRINSIC
coiled coil region	167	207	N/A	INTRINSIC
SANT	428	476	4.42e-6	SMART
coiled coil region	494	550	N/A	INTRINSIC
SANT	607	655	1.43e-14	SMART
low complexity region	668	686	N/A	INTRINSIC
low complexity region	699	726	N/A	INTRINSIC
low complexity region	768	813	N/A	INTRINSIC
low complexity region	822	828	N/A	INTRINSIC
low complexity region	848	860	N/A	INTRINSIC
low complexity region	867	874	N/A	INTRINSIC
low complexity region	905	919	N/A	INTRINSIC
low complexity region	935	944	N/A	INTRINSIC
low complexity region	988	999	N/A	INTRINSIC
low complexity region	1010	1024	N/A	INTRINSIC
low complexity region	1026	1042	N/A	INTRINSIC
low complexity region	1085	1095	N/A	INTRINSIC
low complexity region	1099	1115	N/A	INTRINSIC
low complexity region	1364	1378	N/A	INTRINSIC
low complexity region	1479	1495	N/A	INTRINSIC
low complexity region	1614	1620	N/A	INTRINSIC
low complexity region	1707	1724	N/A	INTRINSIC
low complexity region	1735	1752	N/A	INTRINSIC
low complexity region	1762	1774	N/A	INTRINSIC
low complexity region	1798	1805	N/A	INTRINSIC
low complexity region	1916	1934	N/A	INTRINSIC
low complexity region	1954	1970	N/A	INTRINSIC
low complexity region	2057	2071	N/A	INTRINSIC
PDB:2GPV\|I	2288	2309	8e-8	PDB
low complexity region	2319	2331	N/A	INTRINSIC
low complexity region	2428	2448	N/A	INTRINSIC

Predicted Effect

unknown
Transcript: ENSMUST00000111393
AA Change: Q229R

SMART Domains

Protein: ENSMUSP00000107024
Gene: ENSMUSG00000029478
AA Change: Q229R

Domain	Start	End	E-Value	Type
coiled coil region	1	32	N/A	INTRINSIC
SANT	253	301	4.42e-6	SMART
coiled coil region	319	375	N/A	INTRINSIC
SANT	432	480	1.43e-14	SMART
low complexity region	493	511	N/A	INTRINSIC
low complexity region	524	551	N/A	INTRINSIC
low complexity region	593	638	N/A	INTRINSIC
low complexity region	647	653	N/A	INTRINSIC
low complexity region	673	685	N/A	INTRINSIC
low complexity region	692	699	N/A	INTRINSIC
low complexity region	730	744	N/A	INTRINSIC
low complexity region	760	769	N/A	INTRINSIC
low complexity region	813	824	N/A	INTRINSIC
low complexity region	835	849	N/A	INTRINSIC
low complexity region	851	867	N/A	INTRINSIC
low complexity region	910	920	N/A	INTRINSIC
low complexity region	924	940	N/A	INTRINSIC
low complexity region	1225	1239	N/A	INTRINSIC
low complexity region	1340	1356	N/A	INTRINSIC
low complexity region	1475	1481	N/A	INTRINSIC
low complexity region	1568	1585	N/A	INTRINSIC
low complexity region	1596	1613	N/A	INTRINSIC
low complexity region	1623	1635	N/A	INTRINSIC
low complexity region	1659	1666	N/A	INTRINSIC
low complexity region	1780	1798	N/A	INTRINSIC
low complexity region	1818	1834	N/A	INTRINSIC
low complexity region	1921	1935	N/A	INTRINSIC
PDB:2GPV\|I	2152	2173	7e-8	PDB
low complexity region	2183	2195	N/A	INTRINSIC
low complexity region	2292	2312	N/A	INTRINSIC

Predicted Effect

unknown
Transcript: ENSMUST00000111394
AA Change: Q185R

SMART Domains

Protein: ENSMUSP00000107025
Gene: ENSMUSG00000029478
AA Change: Q185R

Domain	Start	End	E-Value	Type
SANT	209	257	4.42e-6	SMART
coiled coil region	275	331	N/A	INTRINSIC
SANT	388	436	1.43e-14	SMART
low complexity region	449	467	N/A	INTRINSIC
low complexity region	480	507	N/A	INTRINSIC
low complexity region	549	594	N/A	INTRINSIC
low complexity region	603	609	N/A	INTRINSIC
low complexity region	629	641	N/A	INTRINSIC
low complexity region	648	655	N/A	INTRINSIC
low complexity region	686	700	N/A	INTRINSIC
low complexity region	716	725	N/A	INTRINSIC
low complexity region	769	780	N/A	INTRINSIC
low complexity region	791	805	N/A	INTRINSIC
low complexity region	807	823	N/A	INTRINSIC
low complexity region	866	876	N/A	INTRINSIC
low complexity region	880	896	N/A	INTRINSIC
low complexity region	1146	1160	N/A	INTRINSIC
low complexity region	1261	1277	N/A	INTRINSIC
low complexity region	1396	1402	N/A	INTRINSIC
low complexity region	1489	1506	N/A	INTRINSIC
low complexity region	1517	1534	N/A	INTRINSIC
low complexity region	1544	1556	N/A	INTRINSIC
low complexity region	1580	1587	N/A	INTRINSIC
low complexity region	1701	1719	N/A	INTRINSIC
low complexity region	1739	1755	N/A	INTRINSIC
low complexity region	1842	1856	N/A	INTRINSIC
PDB:2GPV\|I	2073	2094	7e-8	PDB
low complexity region	2104	2116	N/A	INTRINSIC
low complexity region	2213	2233	N/A	INTRINSIC

Predicted Effect

unknown
Transcript: ENSMUST00000111398
AA Change: Q404R

SMART Domains

Protein: ENSMUSP00000107029
Gene: ENSMUSG00000029478
AA Change: Q404R

Domain	Start	End	E-Value	Type
low complexity region	147	154	N/A	INTRINSIC
coiled coil region	167	207	N/A	INTRINSIC
SANT	428	476	4.42e-6	SMART
coiled coil region	494	550	N/A	INTRINSIC
SANT	607	655	1.43e-14	SMART
low complexity region	668	686	N/A	INTRINSIC
low complexity region	699	726	N/A	INTRINSIC
low complexity region	768	813	N/A	INTRINSIC
low complexity region	822	828	N/A	INTRINSIC
low complexity region	848	860	N/A	INTRINSIC
low complexity region	867	874	N/A	INTRINSIC
low complexity region	905	919	N/A	INTRINSIC
low complexity region	935	944	N/A	INTRINSIC
low complexity region	988	999	N/A	INTRINSIC
low complexity region	1010	1024	N/A	INTRINSIC
low complexity region	1026	1042	N/A	INTRINSIC
low complexity region	1085	1095	N/A	INTRINSIC
low complexity region	1099	1115	N/A	INTRINSIC
low complexity region	1365	1379	N/A	INTRINSIC
low complexity region	1480	1496	N/A	INTRINSIC
low complexity region	1615	1621	N/A	INTRINSIC
low complexity region	1708	1725	N/A	INTRINSIC
low complexity region	1736	1753	N/A	INTRINSIC
low complexity region	1763	1775	N/A	INTRINSIC
low complexity region	1799	1806	N/A	INTRINSIC
low complexity region	1920	1938	N/A	INTRINSIC
low complexity region	1958	1974	N/A	INTRINSIC
low complexity region	2061	2075	N/A	INTRINSIC
PDB:2GPV\|I	2292	2313	8e-8	PDB
low complexity region	2323	2335	N/A	INTRINSIC
low complexity region	2432	2452	N/A	INTRINSIC

Predicted Effect

unknown
Transcript: ENSMUST00000111402
AA Change: Q404R

SMART Domains

Protein: ENSMUSP00000107033
Gene: ENSMUSG00000029478
AA Change: Q404R

Domain	Start	End	E-Value	Type
Pfam:GPS2_interact	141	229	4.9e-41	PFAM
SANT	428	476	4.42e-6	SMART
coiled coil region	494	550	N/A	INTRINSIC
SANT	607	655	1.43e-14	SMART
low complexity region	668	686	N/A	INTRINSIC
low complexity region	699	726	N/A	INTRINSIC
low complexity region	768	813	N/A	INTRINSIC
low complexity region	822	828	N/A	INTRINSIC
low complexity region	848	860	N/A	INTRINSIC
low complexity region	867	874	N/A	INTRINSIC
low complexity region	905	919	N/A	INTRINSIC
low complexity region	935	944	N/A	INTRINSIC
low complexity region	988	999	N/A	INTRINSIC
low complexity region	1010	1024	N/A	INTRINSIC
low complexity region	1026	1042	N/A	INTRINSIC
low complexity region	1085	1095	N/A	INTRINSIC
low complexity region	1099	1115	N/A	INTRINSIC
low complexity region	1400	1414	N/A	INTRINSIC
low complexity region	1515	1531	N/A	INTRINSIC
low complexity region	1650	1656	N/A	INTRINSIC
low complexity region	1743	1760	N/A	INTRINSIC
low complexity region	1771	1788	N/A	INTRINSIC
low complexity region	1798	1810	N/A	INTRINSIC
low complexity region	1834	1841	N/A	INTRINSIC
low complexity region	1955	1973	N/A	INTRINSIC
low complexity region	1993	2009	N/A	INTRINSIC
low complexity region	2096	2110	N/A	INTRINSIC
PDB:2GPV\|I	2327	2348	8e-8	PDB
low complexity region	2358	2370	N/A	INTRINSIC
low complexity region	2467	2487	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000198978

Meta Mutation Damage Score

0.1525

Coding Region Coverage

1x: 99.1%
3x: 98.1%
10x: 95.7%
20x: 91.2%

Validation Efficiency

95% (81/85)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a nuclear receptor co-repressor that mediates transcriptional silencing of certain target genes. The encoded protein is a member of a family of thyroid hormone- and retinoic acid receptor-associated co-repressors. This protein acts as part of a multisubunit complex which includes histone deacetylases to modify chromatin structure that prevents basal transcriptional activity of target genes. Aberrant expression of this gene is associated with certain cancers. Alternate splicing results in multiple transcript variants encoding different isoforms.[provided by RefSeq, Apr 2011]
PHENOTYPE: Mice homozygous for a null allele die before E16.5 of heart defects and exhibit neural defects. [provided by MGI curators]

Allele List at MGI

All alleles(145) : Targeted(2) Gene trapped(143)

Other mutations in this stock

Total: 72 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2310057J18Rik	T	A	10: 28,858,518 (GRCm39)	I50F	possibly damaging	Het
4930505A04Rik	T	C	11: 30,377,175 (GRCm39)		probably benign	Het
Aadat	A	T	8: 60,979,714 (GRCm39)	D192V	possibly damaging	Het
Akap12	A	G	10: 4,303,640 (GRCm39)	D150G	probably benign	Het
Amigo3	A	T	9: 107,931,231 (GRCm39)	N218I	probably damaging	Het
Ankmy1	A	G	1: 92,827,373 (GRCm39)	S60P	probably benign	Het
Apol7e	G	A	15: 77,602,029 (GRCm39)	S209N	probably damaging	Het
AW551984	A	T	9: 39,510,632 (GRCm39)	Y234*	probably null	Het
Bcam	A	T	7: 19,494,111 (GRCm39)	D393E	probably damaging	Het
Card9	A	G	2: 26,244,398 (GRCm39)	L444P	probably benign	Het
Ccar1	T	C	10: 62,586,780 (GRCm39)	E886G	unknown	Het
Ccnb2	A	T	9: 70,317,559 (GRCm39)		probably null	Het
Cd276	T	C	9: 58,442,838 (GRCm39)	S206G	probably damaging	Het
Cds1	T	A	5: 101,965,828 (GRCm39)		probably benign	Het
Cfap96	G	A	8: 46,409,515 (GRCm39)	S268L	probably benign	Het
Chuk	T	C	19: 44,065,812 (GRCm39)	S661G	possibly damaging	Het
Col17a1	T	C	19: 47,639,276 (GRCm39)	N1090D	probably benign	Het
Col3a1	A	T	1: 45,367,026 (GRCm39)		probably null	Het
Crispld1	G	T	1: 17,821,024 (GRCm39)	V355F	possibly damaging	Het
Cspg4	A	T	9: 56,806,151 (GRCm39)	R2321W	probably damaging	Het
Dner	T	C	1: 84,563,177 (GRCm39)	T61A	probably benign	Het
Dnmt3a	A	T	12: 3,951,660 (GRCm39)	Y679F	probably damaging	Het
Dzip3	A	T	16: 48,798,241 (GRCm39)		probably benign	Het
Eif3l	T	C	15: 78,968,381 (GRCm39)	S217P	possibly damaging	Het
Fbxo42	T	A	4: 140,925,417 (GRCm39)		probably benign	Het
Fhod1	A	T	8: 106,063,957 (GRCm39)		probably benign	Het
Fzd1	T	A	5: 4,806,278 (GRCm39)	I435F	probably damaging	Het
Gapvd1	C	T	2: 34,602,207 (GRCm39)	V647I	possibly damaging	Het
Gm14496	T	C	2: 181,638,002 (GRCm39)	S359P	possibly damaging	Het
Gm5218	C	A	15: 81,383,741 (GRCm39)		noncoding transcript	Het
Hnrnph3	A	G	10: 62,851,579 (GRCm39)		probably null	Het
Hsd17b12	G	T	2: 93,864,321 (GRCm39)	T262K	probably damaging	Het
Igsf10	G	C	3: 59,237,838 (GRCm39)	P781R	probably damaging	Het
Il11ra1	T	A	4: 41,768,207 (GRCm39)	S373T	probably damaging	Het
Kdm3b	A	G	18: 34,942,345 (GRCm39)	D612G	probably damaging	Het
Ldb1	T	C	19: 46,022,903 (GRCm39)	T261A	probably damaging	Het
Lep	C	A	6: 29,069,089 (GRCm39)	H47N	possibly damaging	Het
Lrrtm2	A	T	18: 35,346,428 (GRCm39)	S291R	possibly damaging	Het
Nlrp4d	T	C	7: 10,116,437 (GRCm39)	H148R	probably benign	Het
Nlrp9a	T	A	7: 26,258,093 (GRCm39)	D570E	probably benign	Het
Nphp3	G	A	9: 103,886,413 (GRCm39)	V202I	probably damaging	Het
Nptn	T	A	9: 58,548,073 (GRCm39)	N159K	probably benign	Het
Or4a69	T	A	2: 89,313,315 (GRCm39)	T55S	probably benign	Het
Or4a72	A	T	2: 89,405,746 (GRCm39)	V108D	possibly damaging	Het
Or51f2	G	A	7: 102,526,980 (GRCm39)	V218I	probably benign	Het
Or52a24	A	T	7: 103,381,585 (GRCm39)	T151S	possibly damaging	Het
Or8b53	A	T	9: 38,667,716 (GRCm39)	H244L	probably damaging	Het
Pcolce	T	A	5: 137,608,769 (GRCm39)	R13*	probably null	Het
Pdgfra	A	G	5: 75,353,264 (GRCm39)	Y1018C	probably damaging	Het
Prima1	A	G	12: 103,201,854 (GRCm39)	S74P	probably damaging	Het
Prl7c1	A	G	13: 27,962,838 (GRCm39)	L55P	probably damaging	Het
Rasef	A	G	4: 73,658,574 (GRCm39)	V513A	probably damaging	Het
Rgs1	T	C	1: 144,121,227 (GRCm39)		probably null	Het
Rlf	T	C	4: 121,005,488 (GRCm39)	E1164G	probably benign	Het
Rnf213	A	T	11: 119,354,171 (GRCm39)	N4016I	probably damaging	Het
Sae1	C	T	7: 16,064,537 (GRCm39)		probably null	Het
Serping1	A	T	2: 84,601,848 (GRCm39)	D207E	probably benign	Het
Setd2	T	A	9: 110,380,464 (GRCm39)	D33E	unknown	Het
Simc1	T	C	13: 54,673,071 (GRCm39)	M473T	probably benign	Het
Slc30a6	T	A	17: 74,725,610 (GRCm39)		probably benign	Het
Slc4a5	T	C	6: 83,242,669 (GRCm39)	L346P	probably damaging	Het
Spef2	T	A	15: 9,596,660 (GRCm39)	Q1473L	probably damaging	Het
St3gal3	G	T	4: 117,817,204 (GRCm39)	A44D	possibly damaging	Het
Sv2b	G	T	7: 74,797,425 (GRCm39)	T323K	probably damaging	Het
Sycp2	T	A	2: 177,993,461 (GRCm39)	N1228I	possibly damaging	Het
Thbs2	T	A	17: 14,910,030 (GRCm39)	M190L	probably benign	Het
Tnrc6a	G	A	7: 122,776,098 (GRCm39)	V1190I	probably benign	Het
Utrn	A	T	10: 12,312,029 (GRCm39)	I673K	possibly damaging	Het
Vmn2r114	C	T	17: 23,510,675 (GRCm39)	V602M	probably damaging	Het
Wdr7	A	T	18: 64,057,989 (GRCm39)	I1273L	probably benign	Het
Zfp618	T	C	4: 63,051,175 (GRCm39)	L652P	probably damaging	Het
Zfp804a	G	A	2: 81,884,095 (GRCm39)		probably benign	Het

Other mutations in Ncor2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00330:Ncor2	APN	5	125,119,807 (GRCm39)	critical splice donor site	probably null
IGL00519:Ncor2	APN	5	125,161,988 (GRCm39)	missense	unknown
IGL00900:Ncor2	APN	5	125,102,848 (GRCm39)	missense	probably damaging	1.00
IGL00950:Ncor2	APN	5	125,163,954 (GRCm39)	missense	unknown
IGL01320:Ncor2	APN	5	125,186,991 (GRCm39)	missense	probably benign	0.00
IGL01382:Ncor2	APN	5	125,132,837 (GRCm39)	missense	probably damaging	0.96
IGL01573:Ncor2	APN	5	125,162,090 (GRCm39)	missense	unknown
IGL01721:Ncor2	APN	5	125,128,001 (GRCm39)	missense	probably damaging	1.00
IGL01875:Ncor2	APN	5	125,142,934 (GRCm39)	missense	unknown
IGL02090:Ncor2	APN	5	125,111,467 (GRCm39)	missense	probably damaging	0.99
IGL02192:Ncor2	APN	5	125,101,301 (GRCm39)	missense	probably damaging	1.00
IGL02396:Ncor2	APN	5	125,114,978 (GRCm39)	missense	probably damaging	1.00
IGL02934:Ncor2	APN	5	125,102,621 (GRCm39)	missense	probably benign	0.33
IGL02997:Ncor2	APN	5	125,196,634 (GRCm39)	intron	probably benign
R0019:Ncor2	UTSW	5	125,196,545 (GRCm39)	critical splice donor site	probably null
R0331:Ncor2	UTSW	5	125,161,981 (GRCm39)	missense	unknown
R0333:Ncor2	UTSW	5	125,111,408 (GRCm39)	splice site	probably benign
R0403:Ncor2	UTSW	5	125,110,401 (GRCm39)	missense	possibly damaging	0.73
R0557:Ncor2	UTSW	5	125,183,369 (GRCm39)	nonsense	probably null
R0562:Ncor2	UTSW	5	125,162,093 (GRCm39)	missense	unknown
R0671:Ncor2	UTSW	5	125,126,451 (GRCm39)	missense	probably benign	0.13
R0699:Ncor2	UTSW	5	125,106,176 (GRCm39)	unclassified	probably benign
R0865:Ncor2	UTSW	5	125,116,046 (GRCm39)	missense	probably benign	0.17
R1183:Ncor2	UTSW	5	125,100,585 (GRCm39)	missense	possibly damaging	0.65
R1325:Ncor2	UTSW	5	125,195,844 (GRCm39)	intron	probably benign
R1344:Ncor2	UTSW	5	125,102,510 (GRCm39)	missense	probably damaging	1.00
R1433:Ncor2	UTSW	5	125,187,039 (GRCm39)	intron	probably benign
R1481:Ncor2	UTSW	5	125,104,202 (GRCm39)	nonsense	probably null
R1539:Ncor2	UTSW	5	125,187,003 (GRCm39)	missense	probably benign	0.07
R1558:Ncor2	UTSW	5	125,110,610 (GRCm39)	missense	probably damaging	1.00
R1611:Ncor2	UTSW	5	125,187,084 (GRCm39)	intron	probably benign
R1764:Ncor2	UTSW	5	125,105,679 (GRCm39)	missense	possibly damaging	0.91
R1789:Ncor2	UTSW	5	125,096,954 (GRCm39)	missense	probably damaging	1.00
R1809:Ncor2	UTSW	5	125,195,857 (GRCm39)	intron	probably benign
R1901:Ncor2	UTSW	5	125,102,489 (GRCm39)	missense	probably benign	0.39
R1946:Ncor2	UTSW	5	125,111,476 (GRCm39)	missense	probably damaging	1.00
R1970:Ncor2	UTSW	5	125,115,982 (GRCm39)	missense	probably damaging	0.99
R2048:Ncor2	UTSW	5	125,161,996 (GRCm39)	missense	unknown
R2137:Ncor2	UTSW	5	125,107,776 (GRCm39)	missense	probably damaging	1.00
R2270:Ncor2	UTSW	5	125,115,019 (GRCm39)	missense	probably benign	0.33
R2380:Ncor2	UTSW	5	125,113,144 (GRCm39)	missense	possibly damaging	0.89
R2570:Ncor2	UTSW	5	125,105,864 (GRCm39)	critical splice acceptor site	probably null
R2918:Ncor2	UTSW	5	125,102,824 (GRCm39)	missense	probably damaging	0.99
R2921:Ncor2	UTSW	5	125,132,855 (GRCm39)	missense	probably damaging	1.00
R2922:Ncor2	UTSW	5	125,132,855 (GRCm39)	missense	probably damaging	1.00
R2923:Ncor2	UTSW	5	125,132,855 (GRCm39)	missense	probably damaging	1.00
R3116:Ncor2	UTSW	5	125,101,230 (GRCm39)	missense	probably damaging	1.00
R3768:Ncor2	UTSW	5	125,105,751 (GRCm39)	missense	probably damaging	1.00
R3826:Ncor2	UTSW	5	125,195,756 (GRCm39)	intron	probably benign
R3829:Ncor2	UTSW	5	125,195,756 (GRCm39)	intron	probably benign
R3830:Ncor2	UTSW	5	125,195,756 (GRCm39)	intron	probably benign
R3951:Ncor2	UTSW	5	125,109,320 (GRCm39)	missense	possibly damaging	0.94
R4175:Ncor2	UTSW	5	125,128,020 (GRCm39)	missense	probably damaging	0.99
R4360:Ncor2	UTSW	5	125,106,036 (GRCm39)	missense	probably damaging	1.00
R4470:Ncor2	UTSW	5	125,179,705 (GRCm39)	critical splice donor site	probably null
R4490:Ncor2	UTSW	5	125,113,879 (GRCm39)	splice site	probably null
R4573:Ncor2	UTSW	5	125,132,889 (GRCm39)	missense	probably damaging	0.99
R4611:Ncor2	UTSW	5	125,107,923 (GRCm39)	missense	probably damaging	1.00
R4799:Ncor2	UTSW	5	125,114,124 (GRCm39)	critical splice donor site	probably null
R4851:Ncor2	UTSW	5	125,110,431 (GRCm39)	missense	possibly damaging	0.93
R4853:Ncor2	UTSW	5	125,158,247 (GRCm39)	missense	unknown
R4853:Ncor2	UTSW	5	125,102,169 (GRCm39)	missense	probably damaging	0.99
R4896:Ncor2	UTSW	5	125,126,404 (GRCm39)	critical splice donor site	probably null
R4997:Ncor2	UTSW	5	125,111,074 (GRCm39)	missense	probably damaging	0.99
R5057:Ncor2	UTSW	5	125,125,130 (GRCm39)	missense	possibly damaging	0.86
R5253:Ncor2	UTSW	5	125,103,994 (GRCm39)	missense	probably benign	0.44
R5461:Ncor2	UTSW	5	125,104,177 (GRCm39)	missense	probably damaging	1.00
R5585:Ncor2	UTSW	5	125,144,975 (GRCm39)	nonsense	probably null
R5638:Ncor2	UTSW	5	125,125,364 (GRCm39)	missense	probably benign	0.33
R5879:Ncor2	UTSW	5	125,103,839 (GRCm39)	unclassified	probably benign
R5967:Ncor2	UTSW	5	125,146,048 (GRCm39)	missense	unknown
R5999:Ncor2	UTSW	5	125,110,505 (GRCm39)	missense	probably damaging	1.00
R6020:Ncor2	UTSW	5	125,097,075 (GRCm39)	missense	probably benign	0.14
R6109:Ncor2	UTSW	5	125,132,910 (GRCm39)	missense	probably damaging	1.00
R6423:Ncor2	UTSW	5	125,164,966 (GRCm39)	missense	unknown
R6462:Ncor2	UTSW	5	125,101,236 (GRCm39)	missense	probably damaging	1.00
R6478:Ncor2	UTSW	5	125,187,069 (GRCm39)	intron	probably benign
R7074:Ncor2	UTSW	5	125,126,430 (GRCm39)	nonsense	probably null
R7179:Ncor2	UTSW	5	125,132,847 (GRCm39)	missense	unknown
R7261:Ncor2	UTSW	5	125,187,143 (GRCm39)	splice site	probably null
R7263:Ncor2	UTSW	5	125,109,196 (GRCm39)	missense
R7273:Ncor2	UTSW	5	125,100,687 (GRCm39)	missense
R7282:Ncor2	UTSW	5	125,097,104 (GRCm39)	missense
R7570:Ncor2	UTSW	5	125,107,153 (GRCm39)	missense
R7725:Ncor2	UTSW	5	125,100,630 (GRCm39)	missense
R7747:Ncor2	UTSW	5	125,104,102 (GRCm39)	missense
R7748:Ncor2	UTSW	5	125,187,031 (GRCm39)	missense	unknown
R7825:Ncor2	UTSW	5	125,114,141 (GRCm39)	missense	possibly damaging	0.53
R8008:Ncor2	UTSW	5	125,144,983 (GRCm39)	missense	unknown
R8126:Ncor2	UTSW	5	125,183,268 (GRCm39)	missense	unknown
R8137:Ncor2	UTSW	5	125,114,957 (GRCm39)	missense
R8706:Ncor2	UTSW	5	125,145,010 (GRCm39)	missense	unknown
R8751:Ncor2	UTSW	5	125,115,964 (GRCm39)	missense
R8819:Ncor2	UTSW	5	125,106,291 (GRCm39)	missense
R8820:Ncor2	UTSW	5	125,106,291 (GRCm39)	missense
R8824:Ncor2	UTSW	5	125,195,821 (GRCm39)	missense
R8867:Ncor2	UTSW	5	125,179,739 (GRCm39)	missense	unknown
R8919:Ncor2	UTSW	5	125,106,253 (GRCm39)	missense
R8922:Ncor2	UTSW	5	125,163,939 (GRCm39)	missense	unknown
R9076:Ncor2	UTSW	5	125,111,086 (GRCm39)	missense
R9249:Ncor2	UTSW	5	125,186,988 (GRCm39)	missense	unknown
R9276:Ncor2	UTSW	5	125,113,150 (GRCm39)	missense
R9362:Ncor2	UTSW	5	125,095,265 (GRCm39)	missense
R9667:Ncor2	UTSW	5	125,125,545 (GRCm39)	missense	unknown
R9684:Ncor2	UTSW	5	125,102,139 (GRCm39)	missense
Z1088:Ncor2	UTSW	5	125,163,904 (GRCm39)	critical splice donor site	probably null
Z1088:Ncor2	UTSW	5	125,144,852 (GRCm39)	missense	unknown
Z1177:Ncor2	UTSW	5	125,113,913 (GRCm39)	missense
Z1177:Ncor2	UTSW	5	125,125,058 (GRCm39)	missense	probably damaging	0.98

Predicted Primers

PCR Primer
(F):5'- CAGGAGCTGTCTGGCTGAATGAATG -3'
(R):5'- AGGTCCTCTGCATACCTTGTGCTG -3'

Sequencing Primer
(F):5'- GGGACAAGGAGATCCATCTATTACC -3'
(R):5'- TTAAGCCAGACAGACATGTGC -3'

Posted On

2014-04-24