Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01861:Ndufv1'

178335

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Ndufv1

Ensembl Gene

ENSMUSG00000037916

Gene Name

NADH:ubiquinone oxidoreductase core subunit V1

Synonyms

24 kDa (FP)

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

IGL01861

Quality Score

Status

Chromosome

Chromosomal Location

4057499-4062755 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 4058803 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Alanine at position 235 (V235A)

Ref Sequence

ENSEMBL: ENSMUSP00000042967 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000025806] [ENSMUST00000042497] [ENSMUST00000128787] [ENSMUST00000129706] [ENSMUST00000133474] [ENSMUST00000134479] [ENSMUST00000136921] [ENSMUST00000155405]

AlphaFold

Q91YT0

Predicted Effect

probably benign
Transcript: ENSMUST00000025806

SMART Domains

Protein: ENSMUSP00000025806
Gene: ENSMUSG00000024871

Domain	Start	End	E-Value	Type
C2	99	206	1.14e-10	SMART
low complexity region	231	243	N/A	INTRINSIC
C2	259	373	5.14e-18	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000042497
AA Change: V235A

PolyPhen 2 Score 0.032 (Sensitivity: 0.95; Specificity: 0.82)

SMART Domains

Protein: ENSMUSP00000042967
Gene: ENSMUSG00000037916
AA Change: V235A

Domain	Start	End	E-Value	Type
Pfam:Complex1_51K	80	252	2.4e-52	PFAM
Pfam:SLBB	275	327	5.1e-10	PFAM
NADH_4Fe-4S	364	409	1.05e-22	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000127016

Predicted Effect

probably benign
Transcript: ENSMUST00000128787
AA Change: V226A

PolyPhen 2 Score 0.030 (Sensitivity: 0.95; Specificity: 0.82)

SMART Domains

Protein: ENSMUSP00000123069
Gene: ENSMUSG00000037916
AA Change: V226A

Domain	Start	End	E-Value	Type
Pfam:Complex1_51K	71	243	1.6e-52	PFAM
Pfam:SLBB	266	318	8.6e-10	PFAM
NADH_4Fe-4S	355	400	1.05e-22	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000129706

SMART Domains

Protein: ENSMUSP00000115653
Gene: ENSMUSG00000037916

Domain	Start	End	E-Value	Type
Pfam:Complex1_51K	80	115	1.4e-9	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000132747

Predicted Effect

probably benign
Transcript: ENSMUST00000133474

SMART Domains

Protein: ENSMUSP00000120223
Gene: ENSMUSG00000037916

Domain	Start	End	E-Value	Type
Pfam:Complex1_51K	1	146	3.3e-48	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000134479
AA Change: V156A

PolyPhen 2 Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)

SMART Domains

Protein: ENSMUSP00000121915
Gene: ENSMUSG00000037916
AA Change: V156A

Domain	Start	End	E-Value	Type
Pfam:Complex1_51K	1	173	3.6e-53	PFAM
Pfam:SLBB	196	248	5.2e-11	PFAM
NADH_4Fe-4S	285	330	1.05e-22	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000134049

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000138917

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000148283

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000147806

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000150852

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000149482

Predicted Effect

probably benign
Transcript: ENSMUST00000136921

SMART Domains

Protein: ENSMUSP00000123680
Gene: ENSMUSG00000037916

Domain	Start	End	E-Value	Type
Pfam:Complex1_51K	1	114	6.7e-37	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000155405

SMART Domains

Protein: ENSMUSP00000119218
Gene: ENSMUSG00000024869

Domain	Start	End	E-Value	Type
Pfam:NUDIX	29	159	8.1e-15	PFAM

Coding Region Coverage

Validation Efficiency

MGI Phenotype

FUNCTION: This gene encodes a subunit of the NADH-ubiquinone oxidoreductase (complex I) enzyme, which is a large, multimeric protein. It is the first enzyme complex in the mitochondrial electron transport chain and catalyzes the transfer of electrons from NADH to the electron acceptor ubiquinone. The proton gradient created by electron transfer drives the conversion of ADP to ATP. This gene is a core subunit and is conserved in prokaryotes and eukaryotes. The human ortholog of this protein has been characterized. It has consensus motifs for NADH, flavin mononucleotide, and iron-sulfur binding sites and participates in the oxidation of NADH as part of the dehydrogenase module of complex I. In humans, deficiencies in complex I are associated with myopathies, encephalomyopathies, and neurodegenerative disorders. [provided by RefSeq, Jun 2013]

Allele List at MGI

Other mutations in this stock

Total: 32 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Arrdc5	T	C	17: 56,607,144 (GRCm39)	T34A	possibly damaging	Het
Atm	C	A	9: 53,405,912 (GRCm39)	R1252L	probably null	Het
Cd34	T	C	1: 194,640,888 (GRCm39)		probably benign	Het
Cmya5	A	G	13: 93,226,256 (GRCm39)	V2944A	probably damaging	Het
Cntnap3	C	T	13: 64,946,922 (GRCm39)	G169D	probably damaging	Het
Dnah7a	T	A	1: 53,679,508 (GRCm39)	T326S	probably benign	Het
Dnah7a	C	T	1: 53,623,608 (GRCm39)		probably benign	Het
Fam133b	A	G	5: 3,614,242 (GRCm39)		probably benign	Het
Fhod1	A	G	8: 106,057,808 (GRCm39)	S906P	probably damaging	Het
Gli3	A	G	13: 15,899,910 (GRCm39)	Y1099C	probably damaging	Het
Gpr63	C	T	4: 25,008,545 (GRCm39)	T423M	probably damaging	Het
Hpx	A	T	7: 105,241,393 (GRCm39)	Y339*	probably null	Het
Lingo2	A	T	4: 35,709,526 (GRCm39)	D151E	probably benign	Het
Mill2	A	T	7: 18,590,565 (GRCm39)	Q215L	probably damaging	Het
Naf1	T	C	8: 67,317,185 (GRCm39)		probably benign	Het
Or8b41	T	C	9: 38,055,046 (GRCm39)	I205T	probably damaging	Het
Pafah1b1	A	T	11: 74,581,403 (GRCm39)	N22K	possibly damaging	Het
Prune1	G	T	3: 95,172,868 (GRCm39)	R66S	probably damaging	Het
Ptcd1	A	T	5: 145,095,587 (GRCm39)	I291N	possibly damaging	Het
Ptprk	A	G	10: 28,259,441 (GRCm39)	I294V	possibly damaging	Het
Rfx6	G	A	10: 51,597,675 (GRCm39)	V471M	probably damaging	Het
Rnase6	C	A	14: 51,367,748 (GRCm39)	Q47K	probably benign	Het
Skint5	T	C	4: 113,417,021 (GRCm39)		probably benign	Het
Srcap	T	A	7: 127,124,457 (GRCm39)		probably benign	Het
Stap1	A	G	5: 86,244,383 (GRCm39)	I217V	possibly damaging	Het
Taf1d	T	C	9: 15,220,035 (GRCm39)		probably null	Het
Tecta	T	C	9: 42,284,658 (GRCm39)	H809R	probably benign	Het
Tex15	A	G	8: 34,060,717 (GRCm39)	N49S	probably damaging	Het
Tubb4b-ps1	A	G	5: 7,229,374 (GRCm39)		probably benign	Het
Uhrf2	A	G	19: 30,063,804 (GRCm39)	Y589C	probably damaging	Het
Zfp616	A	T	11: 73,973,742 (GRCm39)	T4S	possibly damaging	Het
Zfp687	A	T	3: 94,919,171 (GRCm39)	F200L	probably damaging	Het

Other mutations in Ndufv1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02376:Ndufv1	APN	19	4,057,823 (GRCm39)	splice site	probably null
R1929:Ndufv1	UTSW	19	4,058,347 (GRCm39)	missense	probably benign	0.11
R2270:Ndufv1	UTSW	19	4,058,347 (GRCm39)	missense	probably benign	0.11
R2271:Ndufv1	UTSW	19	4,058,347 (GRCm39)	missense	probably benign	0.11
R3917:Ndufv1	UTSW	19	4,060,002 (GRCm39)	missense	probably damaging	1.00
R4844:Ndufv1	UTSW	19	4,062,574 (GRCm39)	missense	probably benign	0.00
R4875:Ndufv1	UTSW	19	4,062,653 (GRCm39)	splice site	probably null
R5188:Ndufv1	UTSW	19	4,059,988 (GRCm39)	missense	probably damaging	1.00
R5853:Ndufv1	UTSW	19	4,058,811 (GRCm39)	splice site	probably null
R6614:Ndufv1	UTSW	19	4,058,749 (GRCm39)	missense	probably benign	0.24
R7791:Ndufv1	UTSW	19	4,061,533 (GRCm39)	splice site	probably null
R9155:Ndufv1	UTSW	19	4,059,912 (GRCm39)	missense	probably damaging	0.97
R9253:Ndufv1	UTSW	19	4,059,412 (GRCm39)	missense	probably damaging	1.00
R9443:Ndufv1	UTSW	19	4,057,614 (GRCm39)	missense	probably benign	0.00
R9626:Ndufv1	UTSW	19	4,058,064 (GRCm39)	nonsense	probably null

Posted On

2014-05-07