Incidental Mutation 'IGL01879:Vmn1r88'
ID179004
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn1r88
Ensembl Gene ENSMUSG00000095902
Gene Namevomeronasal 1 receptor, 88
Synonyms
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.070) question?
Stock #IGL01879
Quality Score
Status
Chromosome7
Chromosomal Location13177719-13178669 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to A at 13178302 bp
ZygosityHeterozygous
Amino Acid Change Methionine to Lysine at position 195 (M195K)
Ref Sequence ENSEMBL: ENSMUSP00000128946 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000171783]
Predicted Effect noncoding transcript
Transcript: ENSMUST00000122190
Predicted Effect probably benign
Transcript: ENSMUST00000171783
AA Change: M195K

PolyPhen 2 Score 0.120 (Sensitivity: 0.93; Specificity: 0.86)
SMART Domains Protein: ENSMUSP00000128946
Gene: ENSMUSG00000095902
AA Change: M195K

DomainStartEndE-ValueType
Pfam:TAS2R 1 306 2e-14 PFAM
Pfam:V1R 35 301 1.4e-30 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 32 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Cgn G A 3: 94,774,364 R474* probably null Het
Chmp4b T C 2: 154,692,681 probably benign Het
Chst15 A G 7: 132,270,265 Y96H possibly damaging Het
Clstn3 A G 6: 124,438,810 S638P probably damaging Het
Colq C T 14: 31,543,995 G187E probably damaging Het
Cyp2b23 A G 7: 26,672,854 Y389H probably benign Het
Cyp3a13 T C 5: 137,919,003 Q54R probably benign Het
Dscc1 T C 15: 55,086,816 I178V probably benign Het
Fbxo4 G A 15: 3,975,954 T148M probably damaging Het
Gm10717 A T 9: 3,026,287 Y195F probably damaging Het
Gm10718 A T 9: 3,025,118 Y194F probably benign Het
Gm21738 G A 14: 19,416,979 S144L probably benign Het
Gpr162 A G 6: 124,861,241 S149P probably damaging Het
Grid1 T A 14: 35,450,370 I611N possibly damaging Het
Mgat5 T C 1: 127,397,550 F385L probably damaging Het
Npepps T C 11: 97,258,340 T17A possibly damaging Het
Olfr1233 T C 2: 89,340,022 I93M probably benign Het
Olfr484 A T 7: 108,125,164 I33N possibly damaging Het
Olfr733 A G 14: 50,298,512 S266P probably benign Het
Olfr847 A T 9: 19,375,407 L158* probably null Het
Parg T C 14: 32,271,622 probably benign Het
Rad51ap2 A G 12: 11,458,138 D687G probably benign Het
Sh3bp1 T G 15: 78,907,992 S450A probably damaging Het
Skap2 T C 6: 51,996,034 D90G possibly damaging Het
Smc5 C T 19: 23,228,184 R796H probably damaging Het
Tdrd12 A C 7: 35,521,923 I146S probably damaging Het
Tinf2 T C 14: 55,680,906 probably benign Het
Trio G A 15: 27,741,033 T2702I probably benign Het
Vmn2r110 T C 17: 20,573,860 H849R probably benign Het
Vmn2r4 C T 3: 64,391,010 G566R probably damaging Het
Vmn2r-ps159 C T 4: 156,338,254 noncoding transcript Het
Wdpcp A G 11: 21,711,630 T301A probably damaging Het
Other mutations in Vmn1r88
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01828:Vmn1r88 APN 7 13177735 missense probably damaging 1.00
IGL02028:Vmn1r88 APN 7 13177792 missense probably benign
IGL02586:Vmn1r88 APN 7 13177808 nonsense probably null
IGL03176:Vmn1r88 APN 7 13177852 missense probably damaging 1.00
PIT4466001:Vmn1r88 UTSW 7 13178476 missense possibly damaging 0.83
R1163:Vmn1r88 UTSW 7 13178133 missense probably benign
R1478:Vmn1r88 UTSW 7 13177951 missense probably damaging 1.00
R2376:Vmn1r88 UTSW 7 13177858 missense probably damaging 0.99
R3624:Vmn1r88 UTSW 7 13177863 missense probably benign 0.08
R4543:Vmn1r88 UTSW 7 13177980 missense possibly damaging 0.52
R4593:Vmn1r88 UTSW 7 13177842 missense probably damaging 0.96
R4721:Vmn1r88 UTSW 7 13178524 nonsense probably null
R5927:Vmn1r88 UTSW 7 13178513 missense probably benign 0.12
R6411:Vmn1r88 UTSW 7 13178043 missense probably damaging 1.00
R6535:Vmn1r88 UTSW 7 13178185 missense probably benign 0.03
R6598:Vmn1r88 UTSW 7 13178223 missense probably damaging 1.00
R6857:Vmn1r88 UTSW 7 13178331 missense possibly damaging 0.87
Posted On2014-05-07