Incidental Mutation 'IGL01884:Tcte1'
ID179077
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Tcte1
Ensembl Gene ENSMUSG00000023949
Gene Namet-complex-associated testis expressed 1
SynonymsTcte-1, D17Sil1
Accession Numbers
Is this an essential gene? Non essential (E-score: 0.000) question?
Stock #IGL01884
Quality Score
Status
Chromosome17
Chromosomal Location45523434-45542679 bp(+) (GRCm38)
Type of Mutationunclassified (2131 bp from exon)
DNA Base Change (assembly) T to C at 45539809 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000136337 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000113547] [ENSMUST00000180252]
Predicted Effect probably damaging
Transcript: ENSMUST00000113547
AA Change: L337P

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000109175
Gene: ENSMUSG00000023949
AA Change: L337P

DomainStartEndE-ValueType
low complexity region 6 17 N/A INTRINSIC
low complexity region 28 47 N/A INTRINSIC
low complexity region 206 222 N/A INTRINSIC
Blast:LRR 235 274 7e-14 BLAST
LRR 304 331 5.02e-6 SMART
LRR 332 358 1.28e-3 SMART
LRR 359 386 5.81e-2 SMART
LRR 387 414 2.05e-2 SMART
LRR 415 442 1.13e-4 SMART
Blast:LRR 443 470 3e-8 BLAST
Predicted Effect probably null
Transcript: ENSMUST00000180252
SMART Domains Protein: ENSMUSP00000136337
Gene: ENSMUSG00000096847

DomainStartEndE-ValueType
low complexity region 2 27 N/A INTRINSIC
Pfam:TMEM151 40 486 2e-213 PFAM
low complexity region 511 518 N/A INTRINSIC
low complexity region 542 556 N/A INTRINSIC
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 23 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1190005I06Rik G A 8: 120,609,035 probably benign Het
Col11a1 G A 3: 114,066,542 G206R unknown Het
Cyp2e1 T C 7: 140,773,750 Y426H probably benign Het
Fcrl1 A G 3: 87,384,737 K68E probably damaging Het
Gabbr2 A G 4: 46,875,711 V137A probably damaging Het
Gm10718 A T 9: 3,025,118 Y194F probably benign Het
Gm21738 G A 14: 19,416,979 S144L probably benign Het
Hacd1 G A 2: 14,035,782 P221S probably damaging Het
Kndc1 C T 7: 139,914,194 T535I probably damaging Het
Lce1f G T 3: 92,719,301 C16* probably null Het
Lrba C T 3: 86,310,412 A543V possibly damaging Het
Lrp1b A T 2: 41,284,213 C676* probably null Het
Mocos A G 18: 24,683,216 K617E probably damaging Het
Muc5b A G 7: 141,868,083 probably benign Het
Mylk A T 16: 34,988,877 probably benign Het
Naip2 A G 13: 100,188,821 probably benign Het
Olfr809 A G 10: 129,776,828 K320E probably benign Het
Pcdhb5 C T 18: 37,321,334 P256S probably benign Het
Rbl2 A G 8: 91,096,836 E464G probably damaging Het
Rfc1 A T 5: 65,274,460 L769Q possibly damaging Het
Setd7 T C 3: 51,542,711 Y98C possibly damaging Het
Tbc1d8 A G 1: 39,376,445 Y920H probably damaging Het
Vmn2r-ps159 C T 4: 156,338,254 noncoding transcript Het
Other mutations in Tcte1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00094:Tcte1 APN 17 45534928 missense probably damaging 1.00
IGL00945:Tcte1 APN 17 45541189 missense probably benign 0.15
IGL01120:Tcte1 APN 17 45539668 missense probably damaging 0.99
IGL01132:Tcte1 APN 17 45539862 missense possibly damaging 0.93
IGL02418:Tcte1 APN 17 45541202 missense probably benign 0.37
IGL02731:Tcte1 APN 17 45539886 missense probably benign 0.00
IGL03130:Tcte1 APN 17 45533296 missense probably damaging 1.00
R0358:Tcte1 UTSW 17 45535285 missense probably benign 0.34
R1519:Tcte1 UTSW 17 45535252 missense probably damaging 1.00
R2013:Tcte1 UTSW 17 45541311 missense probably benign 0.30
R2014:Tcte1 UTSW 17 45541311 missense probably benign 0.30
R3744:Tcte1 UTSW 17 45539671 missense probably damaging 0.99
R4250:Tcte1 UTSW 17 45539691 missense probably benign 0.04
R4976:Tcte1 UTSW 17 45534928 missense probably damaging 1.00
R5398:Tcte1 UTSW 17 45539826 nonsense probably null
R6169:Tcte1 UTSW 17 45535070 missense probably benign 0.01
R6251:Tcte1 UTSW 17 45535159 missense probably benign
R6279:Tcte1 UTSW 17 45533289 missense possibly damaging 0.69
R6300:Tcte1 UTSW 17 45533289 missense possibly damaging 0.69
R6316:Tcte1 UTSW 17 45534860 missense probably benign
R6417:Tcte1 UTSW 17 45535130 missense probably damaging 0.97
R6892:Tcte1 UTSW 17 45533157 missense probably benign
R7047:Tcte1 UTSW 17 45533368 missense possibly damaging 0.52
R7645:Tcte1 UTSW 17 45534989 missense probably benign 0.00
Posted On2014-05-07