Incidental Mutation 'R0100:Trav7-6'
ID17911
Institutional Source Beutler Lab
Gene Symbol Trav7-6
Ensembl Gene ENSMUSG00000096138
Gene NameT cell receptor alpha variable 7-6
Synonyms
MMRRC Submission 038386-MU
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.092) question?
Stock #R0100 (G1)
Quality Score
Status Validated
Chromosome14
Chromosomal Location53716716-53717290 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to C at 53717072 bp
ZygosityHeterozygous
Amino Acid Change Serine to Proline at position 20 (S20P)
Ref Sequence ENSEMBL: ENSMUSP00000139015 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000103641] [ENSMUST00000184687]
Predicted Effect probably damaging
Transcript: ENSMUST00000103641
AA Change: S40P

PolyPhen 2 Score 0.989 (Sensitivity: 0.72; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000100418
Gene: ENSMUSG00000096138
AA Change: S40P

DomainStartEndE-ValueType
signal peptide 1 20 N/A INTRINSIC
IGv 38 111 8.57e-12 SMART
Predicted Effect probably damaging
Transcript: ENSMUST00000103666

PolyPhen 2 Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000100443
Gene: ENSMUSG00000096138

DomainStartEndE-ValueType
IGv 18 91 8.57e-12 SMART
Predicted Effect probably damaging
Transcript: ENSMUST00000184687
AA Change: S20P

PolyPhen 2 Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000139015
Gene: ENSMUSG00000096138
AA Change: S20P

DomainStartEndE-ValueType
IGv 18 91 8.57e-12 SMART
Meta Mutation Damage Score 0.6467 question?
Coding Region Coverage
  • 1x: 90.3%
  • 3x: 88.1%
  • 10x: 82.7%
  • 20x: 75.2%
Validation Efficiency 89% (68/76)
Allele List at MGI
Other mutations in this stock
Total: 42 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4931406P16Rik A G 7: 34,254,011 I442T possibly damaging Het
Agrn A G 4: 156,174,958 C814R probably damaging Het
Aoc1 T C 6: 48,908,604 I681T possibly damaging Het
Atp13a4 T C 16: 29,421,724 H793R probably damaging Het
Atp6v0a4 T C 6: 38,076,815 I351V probably benign Het
Bbof1 T A 12: 84,411,055 D31E probably benign Het
Cpxm2 T A 7: 132,054,871 H554L possibly damaging Het
Ddx55 C T 5: 124,556,782 T91I probably damaging Het
Dhx57 T C 17: 80,275,156 D340G possibly damaging Het
Dnah1 C T 14: 31,262,152 probably null Het
Dpp9 C T 17: 56,205,854 G118D possibly damaging Het
Etl4 T C 2: 20,339,905 S4P probably benign Het
Fat4 A C 3: 38,980,248 N2683T probably damaging Het
Gabrb2 A G 11: 42,487,314 D119G probably damaging Het
Greb1 T A 12: 16,680,224 Q1734L probably benign Het
Gtf2ird2 T C 5: 134,217,015 L705P probably damaging Het
H13 T A 2: 152,689,863 probably null Het
Hgs T G 11: 120,482,852 Y708D possibly damaging Het
Hip1 T C 5: 135,436,453 D367G probably benign Het
Ift140 C T 17: 25,090,954 Q1112* probably null Het
Il17b A G 18: 61,690,271 M59V probably benign Het
Lpin3 T C 2: 160,905,340 Y829H probably damaging Het
Lrrk2 A T 15: 91,745,796 N1230I probably damaging Het
Mindy2 C A 9: 70,607,449 probably benign Het
Nup210 T G 6: 91,069,193 E586A probably benign Het
Olfr1105 T C 2: 87,033,595 T209A probably benign Het
Olfr1344 C T 7: 6,440,400 R167C probably damaging Het
Olfr346 A T 2: 36,688,911 N303I probably benign Het
Osgepl1 A G 1: 53,323,213 I405V probably damaging Het
Pdcd11 T C 19: 47,102,666 S360P probably benign Het
Plekha6 T C 1: 133,270,177 S271P probably damaging Het
Plekhs1 A G 19: 56,478,502 E255G probably damaging Het
Pram1 T A 17: 33,641,399 N313K possibly damaging Het
Rapgef5 C T 12: 117,721,299 S261L probably benign Het
Spint5 T A 2: 164,717,000 C49S probably damaging Het
Tex22 T A 12: 113,088,772 I150N probably benign Het
Thoc6 A T 17: 23,669,850 W195R probably damaging Het
Tmem106a T C 11: 101,586,258 S98P probably benign Het
Tnfrsf18 A G 4: 156,028,366 T170A probably benign Het
Tor1aip1 A T 1: 156,007,075 D342E probably damaging Het
Trpc6 C T 9: 8,653,034 P614S probably damaging Het
Washc5 A G 15: 59,344,098 F811L possibly damaging Het
Other mutations in Trav7-6
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01320:Trav7-6 APN 14 53717108 missense possibly damaging 0.81
R3023:Trav7-6 UTSW 14 53717244 missense probably benign
R4020:Trav7-6 UTSW 14 53717181 missense probably benign 0.19
R5049:Trav7-6 UTSW 14 53717079 missense probably damaging 0.97
R7512:Trav7-6 UTSW 14 53717095 missense probably benign 0.22
R8205:Trav7-6 UTSW 14 53717093 missense probably benign 0.00
R8276:Trav7-6 UTSW 14 53717238 missense probably benign 0.01
Posted On2013-03-25