Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01895:Ttc17'

179374

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Ttc17

Ensembl Gene

ENSMUSG00000027194

Gene Name

tetratricopeptide repeat domain 17

Synonyms

D2Bwg1005e, 9130020K17Rik

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.556) question?

Stock #

IGL01895

Quality Score

Status

Chromosome

Chromosomal Location

94131112-94237034 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to C at 94205491 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Glycine at position 285 (V285G)

Ref Sequence

ENSEMBL: ENSMUSP00000092395 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000094801] [ENSMUST00000111237] [ENSMUST00000111238]

AlphaFold

E9PVB5

Predicted Effect

possibly damaging
Transcript: ENSMUST00000094801
AA Change: V285G

PolyPhen 2 Score 0.798 (Sensitivity: 0.84; Specificity: 0.93)

SMART Domains

Protein: ENSMUSP00000092395
Gene: ENSMUSG00000027194
AA Change: V285G

Domain	Start	End	E-Value	Type
low complexity region	22	38	N/A	INTRINSIC
internal_repeat_1	113	271	7.26e-16	PROSPERO
low complexity region	275	293	N/A	INTRINSIC
TPR	295	328	1.39e-3	SMART
coiled coil region	340	382	N/A	INTRINSIC
TPR	619	652	1.33e1	SMART
Blast:TPR	655	688	3e-10	BLAST
TPR	689	722	4.91e-4	SMART
low complexity region	899	917	N/A	INTRINSIC

Predicted Effect

possibly damaging
Transcript: ENSMUST00000111237
AA Change: V285G

PolyPhen 2 Score 0.665 (Sensitivity: 0.86; Specificity: 0.91)

SMART Domains

Protein: ENSMUSP00000106868
Gene: ENSMUSG00000027194
AA Change: V285G

Domain	Start	End	E-Value	Type
low complexity region	22	38	N/A	INTRINSIC
Blast:TPR	225	258	8e-11	BLAST
low complexity region	275	293	N/A	INTRINSIC
TPR	295	328	1.39e-3	SMART
TPR	619	652	1.33e1	SMART
Blast:TPR	655	688	4e-10	BLAST
TPR	689	722	4.91e-4	SMART
low complexity region	842	860	N/A	INTRINSIC
TPR	1015	1048	2.43e1	SMART
TPR	1051	1084	6.75e1	SMART
TPR	1085	1118	6.84e-3	SMART

Predicted Effect

possibly damaging
Transcript: ENSMUST00000111238
AA Change: V285G

PolyPhen 2 Score 0.665 (Sensitivity: 0.86; Specificity: 0.91)

SMART Domains

Protein: ENSMUSP00000106869
Gene: ENSMUSG00000027194
AA Change: V285G

Domain	Start	End	E-Value	Type
low complexity region	22	38	N/A	INTRINSIC
internal_repeat_2	113	271	8.31e-15	PROSPERO
low complexity region	275	293	N/A	INTRINSIC
TPR	295	328	1.39e-3	SMART
coiled coil region	340	382	N/A	INTRINSIC
TPR	619	652	1.33e1	SMART
Blast:TPR	655	688	4e-10	BLAST
TPR	689	722	4.91e-4	SMART
low complexity region	899	917	N/A	INTRINSIC
TPR	1072	1105	2.43e1	SMART
TPR	1108	1141	6.75e1	SMART
TPR	1142	1175	6.84e-3	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000150266

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 38 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcc6	A	T	7: 45,678,482 (GRCm39)	I56N	possibly damaging	Het
Akr1c13	A	T	13: 4,255,372 (GRCm39)	E321V	possibly damaging	Het
Atp8b3	A	T	10: 80,357,662 (GRCm39)	V1119D	possibly damaging	Het
Cacna1e	G	T	1: 154,319,646 (GRCm39)	F1351L	probably damaging	Het
Cadps2	A	G	6: 23,427,274 (GRCm39)	W585R	probably damaging	Het
Ccdc113	C	T	8: 96,263,086 (GRCm39)		probably benign	Het
Ccer1	A	T	10: 97,529,912 (GRCm39)	I192F	unknown	Het
Chd8	T	C	14: 52,436,551 (GRCm39)	N90S	probably benign	Het
Clca3a1	A	T	3: 144,453,333 (GRCm39)	C463*	probably null	Het
Cplane1	T	A	15: 8,258,591 (GRCm39)	V2279E	possibly damaging	Het
Cyp2c65	T	A	19: 39,060,676 (GRCm39)	C179S	possibly damaging	Het
Dennd4b	A	G	3: 90,182,874 (GRCm39)	Q35R	probably benign	Het
Enpep	T	C	3: 129,063,983 (GRCm39)	E928G	possibly damaging	Het
Fem1c	T	C	18: 46,638,629 (GRCm39)	T458A	probably benign	Het
Fezf2	A	T	14: 12,342,498 (GRCm38)	*456R	probably null	Het
Gm10718	A	T	9: 3,025,118 (GRCm39)	Y194F	probably benign	Het
Gm21738	G	A	14: 19,416,979 (GRCm38)	S144L	probably benign	Het
Iqcm	T	G	8: 76,615,188 (GRCm39)	L423R	probably damaging	Het
Kcnc4	C	A	3: 107,355,534 (GRCm39)	V305L	probably benign	Het
Kif1a	G	A	1: 92,953,455 (GRCm39)	T1337I	possibly damaging	Het
Lpxn	A	G	19: 12,810,450 (GRCm39)	D298G	probably damaging	Het
Lypd8	A	G	11: 58,281,046 (GRCm39)	T203A	possibly damaging	Het
Mrps28	C	T	3: 8,965,119 (GRCm39)	V107M	probably damaging	Het
Myo15b	A	G	11: 115,774,324 (GRCm39)	E586G	possibly damaging	Het
Pdzk1	C	T	3: 96,776,417 (GRCm39)	A459V	possibly damaging	Het
Rbpj	A	G	5: 53,808,728 (GRCm39)	D285G	probably damaging	Het
Rimbp3	T	C	16: 17,029,300 (GRCm39)	L908P	probably damaging	Het
Samd4b	T	C	7: 28,101,334 (GRCm39)		probably null	Het
Slc28a2b	A	C	2: 122,355,572 (GRCm39)	Y588S	possibly damaging	Het
Stau2	C	T	1: 16,416,161 (GRCm39)	G401S	probably damaging	Het
Trpa1	A	T	1: 14,957,867 (GRCm39)	I697K	possibly damaging	Het
Unc5b	A	G	10: 60,602,864 (GRCm39)	F845S	probably damaging	Het
Vmn1r19	A	T	6: 57,382,245 (GRCm39)	Q266L	probably benign	Het
Vmn2r106	T	C	17: 20,499,227 (GRCm39)	N228S	probably benign	Het
Vps13d	A	G	4: 144,882,836 (GRCm39)	F919S	possibly damaging	Het
Zbtb38	C	T	9: 96,570,461 (GRCm39)	V208I	probably benign	Het
Zfp990	A	T	4: 145,263,427 (GRCm39)	T142S	probably damaging	Het
Zfp990	C	A	4: 145,263,428 (GRCm39)	T142N	probably damaging	Het

Other mutations in Ttc17

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00163:Ttc17	APN	2	94,153,428 (GRCm39)	splice site	probably benign
IGL00870:Ttc17	APN	2	94,202,078 (GRCm39)	splice site	probably null
IGL01120:Ttc17	APN	2	94,202,141 (GRCm39)	missense	probably damaging	1.00
IGL01845:Ttc17	APN	2	94,163,177 (GRCm39)	nonsense	probably null
IGL02064:Ttc17	APN	2	94,161,012 (GRCm39)	missense	probably damaging	1.00
IGL02296:Ttc17	APN	2	94,208,055 (GRCm39)	missense	probably damaging	1.00
IGL02309:Ttc17	APN	2	94,173,006 (GRCm39)	missense	probably benign
IGL02456:Ttc17	APN	2	94,193,130 (GRCm39)	splice site	probably benign
IGL02475:Ttc17	APN	2	94,194,721 (GRCm39)	missense	probably damaging	1.00
IGL03341:Ttc17	APN	2	94,205,566 (GRCm39)	missense	probably damaging	1.00
IGL03371:Ttc17	APN	2	94,216,450 (GRCm39)	missense	probably damaging	1.00
R0389:Ttc17	UTSW	2	94,208,439 (GRCm39)	missense	probably benign	0.03
R0443:Ttc17	UTSW	2	94,208,439 (GRCm39)	missense	probably benign	0.03
R0511:Ttc17	UTSW	2	94,153,465 (GRCm39)	missense	possibly damaging	0.87
R0763:Ttc17	UTSW	2	94,163,148 (GRCm39)	missense	probably benign	0.08
R1980:Ttc17	UTSW	2	94,157,049 (GRCm39)	missense	probably benign	0.14
R1981:Ttc17	UTSW	2	94,157,049 (GRCm39)	missense	probably benign	0.14
R1987:Ttc17	UTSW	2	94,194,690 (GRCm39)	missense	probably benign
R2064:Ttc17	UTSW	2	94,196,892 (GRCm39)	missense	probably damaging	1.00
R2147:Ttc17	UTSW	2	94,132,139 (GRCm39)	missense	possibly damaging	0.87
R2155:Ttc17	UTSW	2	94,196,987 (GRCm39)	missense	possibly damaging	0.88
R2844:Ttc17	UTSW	2	94,206,419 (GRCm39)	nonsense	probably null
R3719:Ttc17	UTSW	2	94,194,672 (GRCm39)	missense	probably benign	0.27
R3852:Ttc17	UTSW	2	94,199,758 (GRCm39)	missense	possibly damaging	0.86
R3947:Ttc17	UTSW	2	94,206,491 (GRCm39)	splice site	probably benign
R4411:Ttc17	UTSW	2	94,173,098 (GRCm39)	missense	probably damaging	0.97
R4461:Ttc17	UTSW	2	94,196,916 (GRCm39)	missense	probably benign	0.02
R4660:Ttc17	UTSW	2	94,194,774 (GRCm39)	missense	possibly damaging	0.51
R4762:Ttc17	UTSW	2	94,202,113 (GRCm39)	missense	probably damaging	1.00
R4818:Ttc17	UTSW	2	94,163,236 (GRCm39)	missense	possibly damaging	0.91
R4819:Ttc17	UTSW	2	94,194,955 (GRCm39)	missense	probably damaging	1.00
R4864:Ttc17	UTSW	2	94,196,980 (GRCm39)	missense	probably benign	0.01
R4870:Ttc17	UTSW	2	94,196,954 (GRCm39)	missense	probably damaging	1.00
R5203:Ttc17	UTSW	2	94,209,061 (GRCm39)	missense	probably damaging	1.00
R5288:Ttc17	UTSW	2	94,133,985 (GRCm39)	missense	probably damaging	1.00
R5385:Ttc17	UTSW	2	94,133,985 (GRCm39)	missense	probably damaging	1.00
R5386:Ttc17	UTSW	2	94,133,985 (GRCm39)	missense	probably damaging	1.00
R5453:Ttc17	UTSW	2	94,133,905 (GRCm39)	missense	probably damaging	1.00
R5583:Ttc17	UTSW	2	94,208,027 (GRCm39)	missense	probably damaging	1.00
R5683:Ttc17	UTSW	2	94,192,866 (GRCm39)	missense	probably damaging	1.00
R5921:Ttc17	UTSW	2	94,209,193 (GRCm39)	missense	probably damaging	1.00
R6272:Ttc17	UTSW	2	94,189,100 (GRCm39)	missense	probably damaging	1.00
R6444:Ttc17	UTSW	2	94,133,891 (GRCm39)	missense	possibly damaging	0.57
R6748:Ttc17	UTSW	2	94,216,447 (GRCm39)	missense	probably benign	0.02
R7204:Ttc17	UTSW	2	94,192,773 (GRCm39)	missense	possibly damaging	0.95
R7300:Ttc17	UTSW	2	94,205,479 (GRCm39)	missense	probably damaging	1.00
R7446:Ttc17	UTSW	2	94,205,495 (GRCm39)	missense	probably damaging	0.97
R7680:Ttc17	UTSW	2	94,196,889 (GRCm39)	missense	probably benign	0.06
R7912:Ttc17	UTSW	2	94,209,166 (GRCm39)	missense	probably damaging	1.00
R8083:Ttc17	UTSW	2	94,204,909 (GRCm39)	missense	probably damaging	1.00
R8304:Ttc17	UTSW	2	94,199,526 (GRCm39)	intron	probably benign
R8381:Ttc17	UTSW	2	94,132,166 (GRCm39)	missense	probably damaging	1.00
R8512:Ttc17	UTSW	2	94,202,108 (GRCm39)	missense	probably damaging	1.00
R8737:Ttc17	UTSW	2	94,206,374 (GRCm39)	critical splice donor site	probably null
R8850:Ttc17	UTSW	2	94,237,003 (GRCm39)	missense	possibly damaging	0.55
R8886:Ttc17	UTSW	2	94,205,473 (GRCm39)	missense	probably benign	0.19
R8888:Ttc17	UTSW	2	94,157,049 (GRCm39)	missense	probably benign	0.14
R8891:Ttc17	UTSW	2	94,192,764 (GRCm39)	missense	probably damaging	1.00
R9336:Ttc17	UTSW	2	94,189,198 (GRCm39)	missense	probably benign	0.00
R9600:Ttc17	UTSW	2	94,204,890 (GRCm39)	missense	probably damaging	1.00
R9632:Ttc17	UTSW	2	94,209,097 (GRCm39)	missense	probably damaging	1.00
R9642:Ttc17	UTSW	2	94,194,735 (GRCm39)	missense	probably benign	0.00
R9657:Ttc17	UTSW	2	94,237,010 (GRCm39)	start codon destroyed	probably benign	0.02
X0013:Ttc17	UTSW	2	94,161,015 (GRCm39)	missense	probably damaging	1.00
X0018:Ttc17	UTSW	2	94,209,061 (GRCm39)	missense	probably damaging	1.00
X0025:Ttc17	UTSW	2	94,154,861 (GRCm39)	missense	possibly damaging	0.86

Posted On

2014-05-07