Incidental Mutation 'IGL01903:Hal'
ID179609
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Hal
Ensembl Gene ENSMUSG00000020017
Gene Namehistidine ammonia lyase
Synonymshistidase, Hsd
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.072) question?
Stock #IGL01903
Quality Score
Status
Chromosome10
Chromosomal Location93488768-93519304 bp(+) (GRCm38)
Type of Mutationsplice site
DNA Base Change (assembly) G to A at 93500607 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000123336 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000016031] [ENSMUST00000129421]
Predicted Effect probably benign
Transcript: ENSMUST00000016031
SMART Domains Protein: ENSMUSP00000016031
Gene: ENSMUSG00000020017

DomainStartEndE-ValueType
low complexity region 60 71 N/A INTRINSIC
SCOP:d1gkma_ 114 161 6e-3 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000129421
SMART Domains Protein: ENSMUSP00000123336
Gene: ENSMUSG00000020017

DomainStartEndE-ValueType
Pfam:DUF3534 3 128 6e-9 PFAM
Pfam:Lyase_aromatic 116 590 1.3e-199 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000132624
Predicted Effect noncoding transcript
Transcript: ENSMUST00000152883
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: This gene encodes a member of the histidase protein family. The encoded protein is a cytosolic enzyme which catalyzes the first reaction in histidine catabolism. Defects in this protein cause histidinemia, which is characterized by increased histidine in blood, urine, and cerebrospinal fluid. [provided by RefSeq, Dec 2015]
PHENOTYPE: Mutations in this gene cause elevated histidine levels. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 42 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca4 T A 3: 122,155,401 probably benign Het
Adad1 T A 3: 37,085,082 probably null Het
Asxl3 T A 18: 22,434,576 D70E probably benign Het
Atat1 T A 17: 35,897,800 I380L probably benign Het
Ccnj A G 19: 40,846,010 E351G probably damaging Het
Clca4b A T 3: 144,928,259 Y132N probably damaging Het
Cttnbp2 A C 6: 18,501,965 V16G probably damaging Het
Gcdh A T 8: 84,888,604 L389Q probably damaging Het
Ggta1 A T 2: 35,402,557 F258Y possibly damaging Het
Gm10717 C T 9: 3,025,616 S67L probably benign Het
Gm10718 A T 9: 3,025,118 Y194F probably benign Het
Gm21738 G A 14: 19,416,979 S144L probably benign Het
Gm3696 T A 14: 7,089,782 probably benign Het
Gramd3 A T 18: 56,474,029 S72C probably damaging Het
Haus4 A T 14: 54,542,429 S288T possibly damaging Het
Herc1 A T 9: 66,386,872 K499* probably null Het
Hyou1 C T 9: 44,381,141 probably benign Het
Kng2 C T 16: 22,987,790 R553Q possibly damaging Het
Leng9 G A 7: 4,148,747 A310V probably damaging Het
Magi3 G T 3: 104,051,210 Q520K possibly damaging Het
Mark1 A G 1: 184,929,380 probably benign Het
Mybl1 T A 1: 9,671,576 probably null Het
Ncapd2 A G 6: 125,177,460 S598P probably benign Het
Olfr1110 A C 2: 87,135,379 probably null Het
Olfr126 T C 17: 37,609,867 I295V possibly damaging Het
Olfr1297 T C 2: 111,621,658 K139E probably benign Het
Olfr1441 G A 19: 12,422,683 V125I probably benign Het
Otud6b C T 4: 14,818,458 E148K probably benign Het
Pgghg A G 7: 140,946,828 Q686R probably benign Het
Pkhd1 C A 1: 20,198,137 C3339F probably damaging Het
Pla2g4a T C 1: 149,840,619 D697G possibly damaging Het
Serping1 A T 2: 84,769,772 probably null Het
Sfxn4 T C 19: 60,858,680 Y55C probably damaging Het
Sh3bp5l A G 11: 58,346,038 R274G probably damaging Het
Snx13 A G 12: 35,085,969 T88A probably benign Het
Spz1 G T 13: 92,574,899 N356K probably damaging Het
Taf2 A T 15: 55,060,016 F288L probably benign Het
Tti1 T C 2: 158,000,622 E829G probably benign Het
Ube2z T C 11: 96,065,000 D92G possibly damaging Het
Vmn2r7 A G 3: 64,719,443 Y142H probably benign Het
Vmn2r-ps159 C T 4: 156,338,254 noncoding transcript Het
Zfp397 T A 18: 23,960,029 N190K probably benign Het
Other mutations in Hal
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00465:Hal APN 10 93490069 critical splice donor site probably null
IGL01528:Hal APN 10 93497593 missense probably damaging 1.00
IGL01818:Hal APN 10 93490984 missense probably damaging 0.99
IGL02152:Hal APN 10 93503542 missense possibly damaging 0.74
IGL02249:Hal APN 10 93497538 missense probably damaging 0.99
IGL02366:Hal APN 10 93503528 missense probably damaging 1.00
IGL02421:Hal APN 10 93503473 missense probably damaging 0.98
IGL02721:Hal APN 10 93507498 nonsense probably null
2k1 UTSW 10 93514143 critical splice donor site probably null
alger UTSW 10 93507551 critical splice donor site probably null
Whittaker UTSW 10 93516284 missense probably benign
R0048:Hal UTSW 10 93498991 missense probably damaging 1.00
R0238:Hal UTSW 10 93503482 missense possibly damaging 0.61
R0238:Hal UTSW 10 93503482 missense possibly damaging 0.61
R0239:Hal UTSW 10 93503482 missense possibly damaging 0.61
R0239:Hal UTSW 10 93503482 missense possibly damaging 0.61
R0372:Hal UTSW 10 93507553 splice site probably benign
R0465:Hal UTSW 10 93516284 missense probably benign
R0504:Hal UTSW 10 93489174 missense probably damaging 0.99
R1357:Hal UTSW 10 93500623 missense probably damaging 0.96
R1623:Hal UTSW 10 93516297 missense probably benign 0.00
R1757:Hal UTSW 10 93494628 missense probably benign 0.14
R1918:Hal UTSW 10 93496607 missense probably damaging 1.00
R2048:Hal UTSW 10 93491140 missense probably damaging 0.98
R2291:Hal UTSW 10 93503536 missense probably damaging 0.98
R3001:Hal UTSW 10 93507519 missense probably damaging 1.00
R3002:Hal UTSW 10 93507519 missense probably damaging 1.00
R3927:Hal UTSW 10 93514026 splice site probably benign
R3948:Hal UTSW 10 93489907 missense possibly damaging 0.94
R4394:Hal UTSW 10 93496559 intron probably benign
R4623:Hal UTSW 10 93507439 missense probably damaging 1.00
R4922:Hal UTSW 10 93503539 missense probably damaging 1.00
R5018:Hal UTSW 10 93507551 critical splice donor site probably null
R5072:Hal UTSW 10 93514042 missense probably damaging 0.99
R5073:Hal UTSW 10 93514042 missense probably damaging 0.99
R5074:Hal UTSW 10 93514042 missense probably damaging 0.99
R5303:Hal UTSW 10 93516365 utr 3 prime probably benign
R5806:Hal UTSW 10 93490984 missense probably damaging 0.97
R5992:Hal UTSW 10 93490916 missense probably damaging 1.00
R6294:Hal UTSW 10 93514143 critical splice donor site probably null
R6370:Hal UTSW 10 93497506 missense probably damaging 1.00
R6747:Hal UTSW 10 93500677 missense probably damaging 1.00
R7142:Hal UTSW 10 93500651 missense possibly damaging 0.85
R7299:Hal UTSW 10 93492561 missense probably benign 0.00
R7301:Hal UTSW 10 93492561 missense probably benign 0.00
Posted On2014-05-07