Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01945:Trhr'

181224

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Trhr

Ensembl Gene

ENSMUSG00000038760

Gene Name

thyrotropin releasing hormone receptor

Synonyms

TRH-R1

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

IGL01945

Quality Score

Status

Chromosome

Chromosomal Location

44196135-44235912 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 44197144 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Valine to Alanine at position 20 (V20A)

Ref Sequence

ENSEMBL: ENSMUSP00000154140 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000038856] [ENSMUST00000110289] [ENSMUST00000226626] [ENSMUST00000227505]

AlphaFold

P21761

Predicted Effect

probably benign
Transcript: ENSMUST00000038856
AA Change: V20A

PolyPhen 2 Score 0.006 (Sensitivity: 0.97; Specificity: 0.75)

SMART Domains

Protein: ENSMUSP00000036320
Gene: ENSMUSG00000038760
AA Change: V20A

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srx	33	177	1.6e-7	PFAM
Pfam:7TM_GPCR_Srsx	36	335	4.8e-12	PFAM
Pfam:7tm_1	42	320	1.6e-50	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000110289
AA Change: V20A

PolyPhen 2 Score 0.006 (Sensitivity: 0.97; Specificity: 0.75)

SMART Domains

Protein: ENSMUSP00000105918
Gene: ENSMUSG00000038760
AA Change: V20A

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srx	33	175	1.9e-7	PFAM
Pfam:7TM_GPCR_Srsx	36	335	4.8e-12	PFAM
Pfam:7tm_1	42	320	1.3e-58	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000226626
AA Change: V20A

PolyPhen 2 Score 0.006 (Sensitivity: 0.97; Specificity: 0.75)

Predicted Effect

probably damaging
Transcript: ENSMUST00000227505
AA Change: V20A

PolyPhen 2 Score 0.986 (Sensitivity: 0.74; Specificity: 0.96)

Coding Region Coverage

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a G protein-coupled receptor for thyrotropin-releasing hormone (TRH). Upon binding to TRH, this receptor activates the inositol phospholipid-calcium-protein kinase C transduction pathway. Mutations in this gene have been associated with generalized thyrotropin-releasing hormone resistance. [provided by RefSeq, Sep 2011]
PHENOTYPE: Homozygous null mice are fertile and display decreased thyroxine, triiodothyronine, and prolactin levels. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 53 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca8a	A	C	11: 110,083,304 (GRCm38)		probably benign	Het
Acta2	A	G	19: 34,251,854 (GRCm38)	V45A	probably benign	Het
Adam11	G	A	11: 102,772,910 (GRCm38)	V305M	probably damaging	Het
Adcy1	A	G	11: 7,161,891 (GRCm38)	K919E	probably damaging	Het
Afap1l1	T	C	18: 61,756,863 (GRCm38)	T101A	probably benign	Het
Apbb2	T	A	5: 66,400,251 (GRCm38)	D289V	probably damaging	Het
Appl1	A	G	14: 26,928,655 (GRCm38)	V520A	possibly damaging	Het
Atp5g3	G	A	2: 73,910,969 (GRCm38)	R9C	probably benign	Het
Atp8a2	A	G	14: 60,026,160 (GRCm38)	L375P	probably damaging	Het
C130026I21Rik	A	G	1: 85,254,186 (GRCm38)		probably benign	Het
Cavin1	A	T	11: 100,970,420 (GRCm38)	F16Y	probably benign	Het
Ccdc185	C	A	1: 182,748,876 (GRCm38)	V83L	probably benign	Het
Ccdc80	T	A	16: 45,118,245 (GRCm38)	S772T	probably damaging	Het
Cntn4	T	A	6: 106,437,904 (GRCm38)	V132E	probably damaging	Het
Coa5	A	T	1: 37,429,898 (GRCm38)	C24S	probably damaging	Het
Col6a5	A	T	9: 105,928,290 (GRCm38)	V1139D	unknown	Het
Ddx46	C	A	13: 55,655,072 (GRCm38)	S469*	probably null	Het
Ep300	A	G	15: 81,616,109 (GRCm38)		probably benign	Het
Fcna	A	T	2: 25,627,835 (GRCm38)	M1K	probably null	Het
Gm10718	A	T	9: 3,025,118 (GRCm38)	Y194F	probably benign	Het
Gstm3	T	C	3: 107,967,657 (GRCm38)	E93G	probably damaging	Het
Gtse1	A	G	15: 85,871,547 (GRCm38)	T471A	probably benign	Het
Hepacam2	T	A	6: 3,487,117 (GRCm38)	Y4F	probably benign	Het
Hipk1	T	C	3: 103,744,004 (GRCm38)	I1148V	possibly damaging	Het
Il1r2	A	G	1: 40,102,453 (GRCm38)	T9A	possibly damaging	Het
Kl	A	T	5: 150,988,937 (GRCm38)	D717V	probably damaging	Het
Krt75	G	A	15: 101,570,164 (GRCm38)	T345M	possibly damaging	Het
Myo5a	T	A	9: 75,140,671 (GRCm38)	H260Q	probably damaging	Het
Nckap1l	G	A	15: 103,461,642 (GRCm38)	G156D	probably damaging	Het
Nlrp1b	T	G	11: 71,181,407 (GRCm38)	T537P	probably damaging	Het
Nudt17	A	G	3: 96,707,039 (GRCm38)	I201T	probably damaging	Het
Olfr195	T	C	16: 59,149,464 (GRCm38)	S205P	probably benign	Het
Olfr767	A	T	10: 129,079,303 (GRCm38)	I220N	probably damaging	Het
Olfr845	A	T	9: 19,339,332 (GRCm38)	S291C	probably damaging	Het
Padi6	T	C	4: 140,741,924 (GRCm38)	D35G	probably benign	Het
Plcb1	A	T	2: 135,220,791 (GRCm38)	Y107F	probably benign	Het
Plek2	T	A	12: 78,892,148 (GRCm38)	H279L	probably damaging	Het
Plk2	A	G	13: 110,399,054 (GRCm38)	D470G	possibly damaging	Het
Ranbp17	T	C	11: 33,328,520 (GRCm38)	T116A	possibly damaging	Het
Rbck1	G	A	2: 152,318,316 (GRCm38)	P481L	probably damaging	Het
Reps1	A	G	10: 18,093,836 (GRCm38)	N229S	probably benign	Het
Rngtt	T	C	4: 33,339,073 (GRCm38)	W293R	probably damaging	Het
Robo1	A	T	16: 72,962,226 (GRCm38)	I376F	probably damaging	Het
Ryr2	T	A	13: 11,790,363 (GRCm38)	I872F	probably damaging	Het
Sgip1	T	C	4: 102,966,242 (GRCm38)	Y707H	probably damaging	Het
Slc17a5	G	T	9: 78,587,932 (GRCm38)	D12E	probably benign	Het
Slco1a5	T	A	6: 142,243,989 (GRCm38)		probably null	Het
Strap	A	G	6: 137,741,335 (GRCm38)	I146V	probably benign	Het
Tcim	A	T	8: 24,438,876 (GRCm38)	H7Q	probably benign	Het
Tgfbr3	A	G	5: 107,121,358 (GRCm38)		probably null	Het
Thada	G	T	17: 84,222,766 (GRCm38)	T1725N	probably benign	Het
Vmn2r-ps159	C	T	4: 156,338,254 (GRCm38)		noncoding transcript	Het
Wnt5a	A	G	14: 28,518,562 (GRCm38)	N223S	probably damaging	Het

Other mutations in Trhr

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01596:Trhr	APN	15	44,229,312 (GRCm38)	missense	probably damaging	1.00
IGL01800:Trhr	APN	15	44,229,207 (GRCm38)	missense	possibly damaging	0.69
IGL02608:Trhr	APN	15	44,197,678 (GRCm38)	missense	probably benign	0.08
IGL02825:Trhr	APN	15	44,229,525 (GRCm38)	missense	possibly damaging	0.62
pushover	UTSW	15	44,197,627 (GRCm38)	missense	probably damaging	1.00
P4717OSA:Trhr	UTSW	15	44,197,435 (GRCm38)	missense	probably damaging	0.97
R0007:Trhr	UTSW	15	44,229,151 (GRCm38)	splice site	probably benign
R0276:Trhr	UTSW	15	44,197,086 (GRCm38)	start codon destroyed	probably null	0.74
R0620:Trhr	UTSW	15	44,229,500 (GRCm38)	missense	probably benign	0.01
R1563:Trhr	UTSW	15	44,197,101 (GRCm38)	missense	probably benign	0.05
R1728:Trhr	UTSW	15	44,197,153 (GRCm38)	missense	probably damaging	1.00
R1729:Trhr	UTSW	15	44,197,153 (GRCm38)	missense	probably damaging	1.00
R2144:Trhr	UTSW	15	44,197,183 (GRCm38)	missense	probably benign	0.44
R2167:Trhr	UTSW	15	44,229,242 (GRCm38)	missense	probably damaging	1.00
R3965:Trhr	UTSW	15	44,197,699 (GRCm38)	missense	possibly damaging	0.70
R4246:Trhr	UTSW	15	44,233,460 (GRCm38)	critical splice acceptor site	probably null
R4272:Trhr	UTSW	15	44,197,224 (GRCm38)	missense	probably damaging	0.97
R4378:Trhr	UTSW	15	44,197,627 (GRCm38)	missense	probably damaging	1.00
R4618:Trhr	UTSW	15	44,197,641 (GRCm38)	missense	probably benign	0.00
R5093:Trhr	UTSW	15	44,197,584 (GRCm38)	missense	probably damaging	0.96
R5388:Trhr	UTSW	15	44,197,477 (GRCm38)	missense	possibly damaging	0.91
R5496:Trhr	UTSW	15	44,197,536 (GRCm38)	missense	probably benign	0.00
R6341:Trhr	UTSW	15	44,229,298 (GRCm38)	nonsense	probably null
R6463:Trhr	UTSW	15	44,197,585 (GRCm38)	missense	probably benign	0.09
R6575:Trhr	UTSW	15	44,229,206 (GRCm38)	missense	possibly damaging	0.83
R7483:Trhr	UTSW	15	44,229,231 (GRCm38)	missense	probably damaging	1.00
R8780:Trhr	UTSW	15	44,197,753 (GRCm38)	missense	possibly damaging	0.84
R8807:Trhr	UTSW	15	44,197,816 (GRCm38)	missense	probably benign	0.00
R8897:Trhr	UTSW	15	44,197,340 (GRCm38)	missense	probably benign	0.00
R9525:Trhr	UTSW	15	44,197,477 (GRCm38)	missense	possibly damaging	0.91
R9614:Trhr	UTSW	15	44,197,585 (GRCm38)	missense	probably benign	0.09
Y5406:Trhr	UTSW	15	44,197,641 (GRCm38)	missense	probably benign	0.00

Posted On

2014-05-07