Incidental Mutation 'IGL01950:Or2t47'
| ID |
181289 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or2t47
|
| Ensembl Gene |
ENSMUSG00000057654 |
| Gene Name |
olfactory receptor family 2 subfamily T member 47 |
| Synonyms |
GA_x6K02T2NKPP-873285-874217, MOR275-2, Olfr328 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.063)
|
| Stock # |
IGL01950
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
11 |
| Chromosomal Location |
58442131-58443063 bp(-) (GRCm39) |
| Type of Mutation |
nonsense |
| DNA Base Change (assembly) |
A to T
at 58442560 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Cysteine to Stop codon
at position 168
(C168*)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000150086
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000073933]
[ENSMUST00000108824]
[ENSMUST00000215717]
[ENSMUST00000216725]
|
| AlphaFold |
Q5NCD3 |
| Predicted Effect |
probably null
Transcript: ENSMUST00000073933
AA Change: C168*
|
| SMART Domains |
Protein: ENSMUSP00000073588
Gene: ENSMUSG00000057654
AA Change: C168*
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7TM_GPCR_Srsx
|
34 |
303 |
8.3e-6 |
PFAM |
|
Pfam:7tm_1
|
40 |
289 |
1.4e-34 |
PFAM |
|
Pfam:7tm_4
|
138 |
282 |
4.4e-42 |
PFAM |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000108824
AA Change: C168*
|
| SMART Domains |
Protein: ENSMUSP00000104452
Gene: ENSMUSG00000057654
AA Change: C168*
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
30 |
306 |
7e-45 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
34 |
303 |
8.3e-6 |
PFAM |
|
Pfam:7tm_1
|
40 |
289 |
9.8e-28 |
PFAM |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000215717
AA Change: C168*
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000216725
AA Change: C168*
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 32 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Adm |
G |
A |
7: 110,228,107 (GRCm39) |
R96H |
probably damaging |
Het |
| Aebp1 |
C |
T |
11: 5,819,108 (GRCm39) |
T198I |
probably benign |
Het |
| Arid3b |
A |
T |
9: 57,702,257 (GRCm39) |
I500N |
probably damaging |
Het |
| Clec1b |
T |
A |
6: 129,377,043 (GRCm39) |
W29R |
probably damaging |
Het |
| Cyp2e1 |
T |
C |
7: 140,344,874 (GRCm39) |
|
probably null |
Het |
| Dnah5 |
A |
G |
15: 28,290,435 (GRCm39) |
E1275G |
probably null |
Het |
| Dnajc13 |
A |
T |
9: 104,067,631 (GRCm39) |
I1171N |
possibly damaging |
Het |
| Dpf3 |
T |
G |
12: 83,371,723 (GRCm39) |
T171P |
probably benign |
Het |
| Gm10718 |
A |
T |
9: 3,025,118 (GRCm39) |
Y194F |
probably benign |
Het |
| Hk1 |
T |
C |
10: 62,151,173 (GRCm39) |
D57G |
probably damaging |
Het |
| Kcnc2 |
T |
G |
10: 112,297,980 (GRCm39) |
|
probably benign |
Het |
| Kcnj11 |
A |
T |
7: 45,748,573 (GRCm39) |
F250Y |
probably damaging |
Het |
| Kirrel3 |
C |
T |
9: 34,939,625 (GRCm39) |
|
probably benign |
Het |
| Lmbrd1 |
T |
C |
1: 24,750,683 (GRCm39) |
|
probably null |
Het |
| Mga |
T |
C |
2: 119,772,135 (GRCm39) |
V1665A |
possibly damaging |
Het |
| Ms4a3 |
G |
T |
19: 11,610,199 (GRCm39) |
A121E |
probably damaging |
Het |
| Nfix |
T |
C |
8: 85,440,415 (GRCm39) |
*392W |
probably null |
Het |
| Noxred1 |
C |
T |
12: 87,268,190 (GRCm39) |
V314M |
probably damaging |
Het |
| Or51aa5 |
T |
A |
7: 103,167,472 (GRCm39) |
T40S |
probably benign |
Het |
| Phospho1 |
A |
G |
11: 95,719,548 (GRCm39) |
|
probably benign |
Het |
| Prr5 |
G |
A |
15: 84,650,550 (GRCm39) |
A237T |
probably benign |
Het |
| Rev3l |
C |
T |
10: 39,697,153 (GRCm39) |
T550M |
probably damaging |
Het |
| Sbf2 |
A |
G |
7: 109,965,032 (GRCm39) |
F955L |
probably benign |
Het |
| Slc38a9 |
C |
T |
13: 112,831,787 (GRCm39) |
T179M |
probably damaging |
Het |
| Trpv5 |
T |
G |
6: 41,652,912 (GRCm39) |
D87A |
probably benign |
Het |
| Tubgcp5 |
A |
G |
7: 55,455,836 (GRCm39) |
Q288R |
possibly damaging |
Het |
| Uqcc1 |
A |
G |
2: 155,700,058 (GRCm39) |
Y172H |
probably damaging |
Het |
| Vmn2r23 |
T |
C |
6: 123,718,845 (GRCm39) |
F733L |
possibly damaging |
Het |
| Vmn2r71 |
A |
G |
7: 85,264,827 (GRCm39) |
Y53C |
probably damaging |
Het |
| Vwa5a |
T |
A |
9: 38,638,266 (GRCm39) |
M263K |
probably damaging |
Het |
| Zfp503 |
C |
A |
14: 22,036,488 (GRCm39) |
A143S |
probably benign |
Het |
| Zfp958 |
T |
C |
8: 4,678,917 (GRCm39) |
L314P |
probably damaging |
Het |
|
| Other mutations in Or2t47 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02887:Or2t47
|
APN |
11 |
58,442,987 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03409:Or2t47
|
APN |
11 |
58,442,388 (GRCm39) |
missense |
probably benign |
0.01 |
|
P4748:Or2t47
|
UTSW |
11 |
58,442,348 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0504:Or2t47
|
UTSW |
11 |
58,442,462 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1637:Or2t47
|
UTSW |
11 |
58,442,246 (GRCm39) |
missense |
possibly damaging |
0.64 |
|
R1863:Or2t47
|
UTSW |
11 |
58,442,849 (GRCm39) |
missense |
probably benign |
0.04 |
|
R2158:Or2t47
|
UTSW |
11 |
58,442,768 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2404:Or2t47
|
UTSW |
11 |
58,442,546 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4024:Or2t47
|
UTSW |
11 |
58,442,222 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R4073:Or2t47
|
UTSW |
11 |
58,442,888 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5261:Or2t47
|
UTSW |
11 |
58,442,877 (GRCm39) |
missense |
probably benign |
0.01 |
|
R5399:Or2t47
|
UTSW |
11 |
58,442,969 (GRCm39) |
missense |
probably benign |
0.20 |
|
R6053:Or2t47
|
UTSW |
11 |
58,442,892 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R6411:Or2t47
|
UTSW |
11 |
58,442,483 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R6709:Or2t47
|
UTSW |
11 |
58,442,862 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7243:Or2t47
|
UTSW |
11 |
58,442,227 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7540:Or2t47
|
UTSW |
11 |
58,442,457 (GRCm39) |
missense |
possibly damaging |
0.96 |
|
R8359:Or2t47
|
UTSW |
11 |
58,443,029 (GRCm39) |
missense |
probably benign |
|
|
R8984:Or2t47
|
UTSW |
11 |
58,442,209 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9648:Or2t47
|
UTSW |
11 |
58,442,313 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9676:Or2t47
|
UTSW |
11 |
58,442,253 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1186:Or2t47
|
UTSW |
11 |
58,442,387 (GRCm39) |
missense |
probably benign |
|
|
Z1186:Or2t47
|
UTSW |
11 |
58,442,801 (GRCm39) |
missense |
probably benign |
|
|
Z1186:Or2t47
|
UTSW |
11 |
58,442,940 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1187:Or2t47
|
UTSW |
11 |
58,442,940 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1187:Or2t47
|
UTSW |
11 |
58,442,801 (GRCm39) |
missense |
probably benign |
|
|
Z1187:Or2t47
|
UTSW |
11 |
58,442,387 (GRCm39) |
missense |
probably benign |
|
|
Z1188:Or2t47
|
UTSW |
11 |
58,442,940 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1188:Or2t47
|
UTSW |
11 |
58,442,801 (GRCm39) |
missense |
probably benign |
|
|
Z1188:Or2t47
|
UTSW |
11 |
58,442,387 (GRCm39) |
missense |
probably benign |
|
|
Z1189:Or2t47
|
UTSW |
11 |
58,442,940 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1189:Or2t47
|
UTSW |
11 |
58,442,801 (GRCm39) |
missense |
probably benign |
|
|
Z1189:Or2t47
|
UTSW |
11 |
58,442,387 (GRCm39) |
missense |
probably benign |
|
|
Z1190:Or2t47
|
UTSW |
11 |
58,442,940 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1190:Or2t47
|
UTSW |
11 |
58,442,801 (GRCm39) |
missense |
probably benign |
|
|
Z1190:Or2t47
|
UTSW |
11 |
58,442,387 (GRCm39) |
missense |
probably benign |
|
|
Z1191:Or2t47
|
UTSW |
11 |
58,442,940 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1191:Or2t47
|
UTSW |
11 |
58,442,801 (GRCm39) |
missense |
probably benign |
|
|
Z1191:Or2t47
|
UTSW |
11 |
58,442,387 (GRCm39) |
missense |
probably benign |
|
|
Z1192:Or2t47
|
UTSW |
11 |
58,442,940 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1192:Or2t47
|
UTSW |
11 |
58,442,801 (GRCm39) |
missense |
probably benign |
|
|
Z1192:Or2t47
|
UTSW |
11 |
58,442,387 (GRCm39) |
missense |
probably benign |
|
|
| Posted On |
2014-05-07 |
Incidental Mutation