Incidental Mutation 'IGL01954:Ogfod3'
ID 181372
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Ogfod3
Ensembl Gene ENSMUSG00000025169
Gene Name 2-oxoglutarate and iron-dependent oxygenase domain containing 3
Synonyms 1110031I02Rik
Accession Numbers
Essential gene? Probably non essential (E-score: 0.090) question?
Stock # IGL01954
Quality Score
Status
Chromosome 11
Chromosomal Location 121068419-121095474 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) G to A at 121093851 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Isoleucine at position 53 (T53I)
Ref Sequence ENSEMBL: ENSMUSP00000026169 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000026169] [ENSMUST00000038831] [ENSMUST00000106117] [ENSMUST00000124768]
AlphaFold Q9D136
Predicted Effect probably benign
Transcript: ENSMUST00000026169
AA Change: T53I

PolyPhen 2 Score 0.059 (Sensitivity: 0.94; Specificity: 0.84)
SMART Domains Protein: ENSMUSP00000026169
Gene: ENSMUSG00000025169
AA Change: T53I

DomainStartEndE-ValueType
transmembrane domain 39 61 N/A INTRINSIC
P4Hc 104 302 1.82e-25 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000038831
SMART Domains Protein: ENSMUSP00000048479
Gene: ENSMUSG00000039307

DomainStartEndE-ValueType
Pfam:Glyco_hydro_20 30 223 2.9e-12 PFAM
low complexity region 528 538 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000106117
SMART Domains Protein: ENSMUSP00000101723
Gene: ENSMUSG00000039307

DomainStartEndE-ValueType
Pfam:Glyco_hydro_20 31 229 1.7e-18 PFAM
low complexity region 455 465 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000124768
SMART Domains Protein: ENSMUSP00000122008
Gene: ENSMUSG00000039307

DomainStartEndE-ValueType
Pfam:Glyco_hydro_20 22 152 8.3e-15 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000124925
Predicted Effect noncoding transcript
Transcript: ENSMUST00000128913
Predicted Effect noncoding transcript
Transcript: ENSMUST00000131009
Predicted Effect probably benign
Transcript: ENSMUST00000151495
SMART Domains Protein: ENSMUSP00000123073
Gene: ENSMUSG00000039307

DomainStartEndE-ValueType
Pfam:Glyco_hydro_20 27 220 3.1e-12 PFAM
low complexity region 525 535 N/A INTRINSIC
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 42 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aadacl4fm4 A T 4: 144,396,741 (GRCm39) D330E probably damaging Het
Acsm3 T C 7: 119,374,306 (GRCm39) probably benign Het
Ankrd26 T A 6: 118,535,966 (GRCm39) Y156F possibly damaging Het
Bcr G A 10: 75,011,173 (GRCm39) probably null Het
Cpn2 C T 16: 30,079,138 (GRCm39) A188T probably benign Het
Ctdsp1 T C 1: 74,433,242 (GRCm39) probably benign Het
Cts7 T A 13: 61,500,637 (GRCm39) R303S probably benign Het
Dock7 T C 4: 98,971,388 (GRCm39) D59G probably damaging Het
Garre1 A T 7: 33,944,460 (GRCm39) W91R probably damaging Het
Gpr149 T C 3: 62,438,348 (GRCm39) N603S probably benign Het
Gucy2g A G 19: 55,187,123 (GRCm39) I1099T probably benign Het
Gzf1 G A 2: 148,525,981 (GRCm39) A151T probably benign Het
Ighv1-80 A T 12: 115,876,253 (GRCm39) V21D probably benign Het
Klhl18 T C 9: 110,257,934 (GRCm39) Y432C probably damaging Het
Lama4 A G 10: 38,963,295 (GRCm39) D1289G probably benign Het
Mab21l4 T A 1: 93,079,794 (GRCm39) D432V probably damaging Het
Mcm7 T C 5: 138,165,507 (GRCm39) T466A probably damaging Het
Megf8 A G 7: 25,048,439 (GRCm39) E1704G possibly damaging Het
Mettl25 C T 10: 105,659,068 (GRCm39) C405Y probably damaging Het
Muc6 A C 7: 141,218,497 (GRCm39) S2059A probably benign Het
Ndc1 T A 4: 107,253,001 (GRCm39) I590N probably damaging Het
Npnt G T 3: 132,615,724 (GRCm39) N137K probably damaging Het
Numa1 C T 7: 101,645,300 (GRCm39) R309* probably null Het
Or11i1 A G 3: 106,729,311 (GRCm39) I188T possibly damaging Het
Or5v1 C A 17: 37,809,540 (GRCm39) probably benign Het
Pcdhb9 G T 18: 37,534,794 (GRCm39) V263F probably damaging Het
Pld4 T C 12: 112,734,355 (GRCm39) probably null Het
Ppp2r3c A G 12: 55,339,353 (GRCm39) L170P probably damaging Het
Prex2 T A 1: 11,210,235 (GRCm39) D558E possibly damaging Het
Rasal2 A G 1: 157,005,269 (GRCm39) S227P possibly damaging Het
Rasal2 A T 1: 157,003,686 (GRCm39) D324E probably damaging Het
Rcbtb1 A G 14: 59,467,416 (GRCm39) Y418C probably damaging Het
Rhag T C 17: 41,139,341 (GRCm39) F92S possibly damaging Het
Scel T C 14: 103,840,678 (GRCm39) probably benign Het
Serinc5 A G 13: 92,819,441 (GRCm39) N125S probably damaging Het
Sgpl1 A T 10: 60,936,672 (GRCm39) M561K probably benign Het
Sostdc1 T C 12: 36,367,121 (GRCm39) V99A probably damaging Het
Them6 A G 15: 74,593,538 (GRCm39) Y132C probably damaging Het
Vmn2r129 C T 4: 156,690,549 (GRCm39) noncoding transcript Het
Vmn2r27 A T 6: 124,169,207 (GRCm39) F641Y probably damaging Het
Vps13c A G 9: 67,876,580 (GRCm39) Y3384C probably damaging Het
Zbtb32 G T 7: 30,289,353 (GRCm39) probably null Het
Other mutations in Ogfod3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02398:Ogfod3 APN 11 121,093,851 (GRCm39) missense probably benign 0.06
IGL02458:Ogfod3 APN 11 121,091,749 (GRCm39) missense probably benign 0.22
IGL03411:Ogfod3 APN 11 121,068,630 (GRCm39) makesense probably null
PIT4403001:Ogfod3 UTSW 11 121,087,561 (GRCm39) critical splice donor site probably null
R0145:Ogfod3 UTSW 11 121,085,896 (GRCm39) splice site probably benign
R1302:Ogfod3 UTSW 11 121,074,300 (GRCm39) missense probably damaging 1.00
R3926:Ogfod3 UTSW 11 121,074,255 (GRCm39) missense probably damaging 1.00
R4823:Ogfod3 UTSW 11 121,086,027 (GRCm39) missense probably benign 0.42
R4825:Ogfod3 UTSW 11 121,086,027 (GRCm39) missense probably benign 0.42
R4909:Ogfod3 UTSW 11 121,088,318 (GRCm39) missense probably damaging 1.00
R6378:Ogfod3 UTSW 11 121,093,761 (GRCm39) missense probably benign 0.01
R6953:Ogfod3 UTSW 11 121,093,824 (GRCm39) missense probably benign
R7051:Ogfod3 UTSW 11 121,086,031 (GRCm39) missense probably damaging 0.99
R7618:Ogfod3 UTSW 11 121,093,804 (GRCm39) missense probably damaging 0.96
R7741:Ogfod3 UTSW 11 121,074,362 (GRCm39) critical splice acceptor site probably null
R8112:Ogfod3 UTSW 11 121,095,376 (GRCm39) missense probably damaging 1.00
R8714:Ogfod3 UTSW 11 121,087,608 (GRCm39) missense possibly damaging 0.79
R9769:Ogfod3 UTSW 11 121,074,357 (GRCm39) missense probably damaging 0.99
Posted On 2014-05-07