Incidental Mutation 'IGL01967:Scaf8'
ID181559
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Scaf8
Ensembl Gene ENSMUSG00000046201
Gene NameSR-related CTD-associated factor 8
SynonymsRbm16, A630086M08Rik, A930036P18Rik
Accession Numbers
Is this an essential gene? Probably essential (E-score: 0.899) question?
Stock #IGL01967
Quality Score
Status
Chromosome17
Chromosomal Location3114972-3198859 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to A at 3196938 bp
ZygosityHeterozygous
Amino Acid Change Asparagine to Lysine at position 845 (N845K)
Ref Sequence ENSEMBL: ENSMUSP00000076024 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000076734]
Predicted Effect possibly damaging
Transcript: ENSMUST00000076734
AA Change: N845K

PolyPhen 2 Score 0.909 (Sensitivity: 0.81; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000076024
Gene: ENSMUSG00000046201
AA Change: N845K

DomainStartEndE-ValueType
RPR 6 136 1.26e-42 SMART
low complexity region 157 171 N/A INTRINSIC
low complexity region 193 223 N/A INTRINSIC
low complexity region 232 251 N/A INTRINSIC
low complexity region 271 282 N/A INTRINSIC
low complexity region 305 326 N/A INTRINSIC
low complexity region 363 380 N/A INTRINSIC
low complexity region 397 462 N/A INTRINSIC
RRM 478 547 9.2e-14 SMART
low complexity region 644 677 N/A INTRINSIC
low complexity region 685 712 N/A INTRINSIC
low complexity region 857 883 N/A INTRINSIC
low complexity region 941 953 N/A INTRINSIC
low complexity region 962 971 N/A INTRINSIC
low complexity region 1027 1044 N/A INTRINSIC
internal_repeat_1 1048 1064 2e-5 PROSPERO
internal_repeat_1 1059 1075 2e-5 PROSPERO
low complexity region 1146 1168 N/A INTRINSIC
low complexity region 1249 1268 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000231685
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 31 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcb5 A G 12: 118,867,972 L1215P probably damaging Het
Abce1 T C 8: 79,685,991 D569G probably damaging Het
Adnp A G 2: 168,183,419 V652A possibly damaging Het
Bco2 A G 9: 50,535,509 I448T probably damaging Het
Ccdc129 A T 6: 55,897,911 E282V probably damaging Het
Cdh20 T A 1: 104,941,037 H84Q probably damaging Het
Cep126 A G 9: 8,095,208 probably null Het
Clca4b A G 3: 144,928,190 probably benign Het
Fat2 T A 11: 55,311,823 N142Y probably damaging Het
Gnaq C T 19: 16,378,160 R247C probably damaging Het
Klf3 T C 5: 64,822,087 S91P probably damaging Het
Lmtk2 C A 5: 144,182,779 H1353N probably benign Het
Magi1 G T 6: 93,708,134 H526Q probably damaging Het
Mecr A G 4: 131,861,881 probably null Het
Mllt6 T C 11: 97,674,777 F630L probably damaging Het
Nav1 T C 1: 135,537,245 N274S probably damaging Het
Nmi T C 2: 51,956,040 probably null Het
Olfr862 A G 9: 19,883,589 S239P probably damaging Het
Perm1 G T 4: 156,217,661 G221W probably damaging Het
Pikfyve T A 1: 65,264,365 N1681K possibly damaging Het
Ptch2 T C 4: 117,114,233 probably benign Het
Sc5d A T 9: 42,258,634 L97Q possibly damaging Het
Sema7a A G 9: 57,956,395 K284E probably damaging Het
Slc16a3 G A 11: 120,957,038 V351M probably damaging Het
Strn3 A G 12: 51,652,813 I192T probably damaging Het
Syne2 A C 12: 75,941,303 D1745A probably damaging Het
Ttc13 T C 8: 124,712,647 T123A probably damaging Het
Zbtb18 T A 1: 177,447,782 V236D probably benign Het
Zfp438 T C 18: 5,214,049 E303G probably benign Het
Zfp644 T C 5: 106,638,243 Q146R probably damaging Het
Zfp972 A T 2: 177,921,702 N38K probably damaging Het
Other mutations in Scaf8
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00496:Scaf8 APN 17 3171134 missense unknown
IGL00956:Scaf8 APN 17 3171147 missense unknown
IGL01610:Scaf8 APN 17 3195849 missense probably damaging 1.00
IGL02005:Scaf8 APN 17 3185870 missense probably damaging 1.00
IGL03037:Scaf8 APN 17 3190221 missense probably damaging 0.99
R0320:Scaf8 UTSW 17 3178255 missense unknown
R0789:Scaf8 UTSW 17 3196837 missense possibly damaging 0.94
R0850:Scaf8 UTSW 17 3195774 splice site probably null
R0919:Scaf8 UTSW 17 3197120 missense probably damaging 1.00
R1488:Scaf8 UTSW 17 3197597 missense probably damaging 0.97
R1544:Scaf8 UTSW 17 3145154 missense probably damaging 0.96
R1928:Scaf8 UTSW 17 3168077 missense unknown
R1972:Scaf8 UTSW 17 3169371 missense unknown
R2156:Scaf8 UTSW 17 3164132 splice site probably null
R2164:Scaf8 UTSW 17 3197210 missense probably damaging 1.00
R2680:Scaf8 UTSW 17 3197591 missense possibly damaging 0.95
R3794:Scaf8 UTSW 17 3190249 missense probably damaging 1.00
R4368:Scaf8 UTSW 17 3171195 missense unknown
R4673:Scaf8 UTSW 17 3197985 missense probably benign 0.04
R4694:Scaf8 UTSW 17 3197404 missense probably damaging 1.00
R4716:Scaf8 UTSW 17 3177123 missense unknown
R4852:Scaf8 UTSW 17 3178219 missense unknown
R5036:Scaf8 UTSW 17 3164262 unclassified probably benign
R5193:Scaf8 UTSW 17 3190165 missense probably benign 0.02
R5429:Scaf8 UTSW 17 3197110 missense probably benign 0.14
R5816:Scaf8 UTSW 17 3177713 missense unknown
R6050:Scaf8 UTSW 17 3168108 missense unknown
R6493:Scaf8 UTSW 17 3171119 missense unknown
R6616:Scaf8 UTSW 17 3168055 missense unknown
R7065:Scaf8 UTSW 17 3159211 missense probably damaging 1.00
R7112:Scaf8 UTSW 17 3163029 missense unknown
R7141:Scaf8 UTSW 17 3159182 missense unknown
R7198:Scaf8 UTSW 17 3163098 missense unknown
R7265:Scaf8 UTSW 17 3177625 missense unknown
Z1088:Scaf8 UTSW 17 3162983 unclassified probably benign
Posted On2014-05-07