Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01987:Mgat4d'

181968

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Mgat4d

Ensembl Gene

ENSMUSG00000035057

Gene Name

MGAT4 family, member C

Synonyms

4933434I20Rik

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

IGL01987

Quality Score

Status

Chromosome

Chromosomal Location

84075101-84106031 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 84094731 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Threonine at position 256 (I256T)

Ref Sequence

ENSEMBL: ENSMUSP00000041629 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000038692]

AlphaFold

Q9D4R2

Predicted Effect

probably damaging
Transcript: ENSMUST00000038692
AA Change: I256T

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000041629
Gene: ENSMUSG00000035057
AA Change: I256T

Domain	Start	End	E-Value	Type
transmembrane domain	7	29	N/A	INTRINSIC
Pfam:Glyco_transf_54	70	373	5.9e-120	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000139692

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 42 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca17	A	G	17: 24,565,202 (GRCm39)	F77L	probably benign	Het
Abca8a	A	G	11: 109,964,981 (GRCm39)	F439L	possibly damaging	Het
Abcb5	A	T	12: 118,891,093 (GRCm39)	V468D	probably damaging	Het
Adgrb3	A	T	1: 25,140,512 (GRCm39)		probably null	Het
Ajm1	T	C	2: 25,467,970 (GRCm39)	E647G	possibly damaging	Het
Ankrd28	T	C	14: 31,500,931 (GRCm39)	D50G	probably damaging	Het
Cacna1b	A	T	2: 24,587,579 (GRCm39)		probably null	Het
Capn9	A	G	8: 125,302,965 (GRCm39)	S28G	probably benign	Het
Cdk5rap2	A	G	4: 70,220,319 (GRCm39)		probably null	Het
Dmtf1l	C	T	X: 125,722,098 (GRCm39)	E336K	possibly damaging	Het
E2f5	T	C	3: 14,652,363 (GRCm39)		probably benign	Het
Fam135b	A	G	15: 71,333,964 (GRCm39)	Y1077H	probably benign	Het
Fap	A	G	2: 62,359,020 (GRCm39)	Y428H	probably damaging	Het
Fasn	A	G	11: 120,708,899 (GRCm39)	S595P	probably damaging	Het
Flnb	T	C	14: 7,922,748 (GRCm38)		probably null	Het
Fzd3	A	T	14: 65,477,347 (GRCm39)	V69E	probably damaging	Het
Gcdh	A	T	8: 85,620,110 (GRCm39)		probably benign	Het
Ido1	A	G	8: 25,083,159 (GRCm39)	Y89H	probably benign	Het
Itga2	G	A	13: 114,984,482 (GRCm39)	Q1010*	probably null	Het
Man1a2	T	C	3: 100,551,873 (GRCm39)	Y280C	probably damaging	Het
Mmrn1	A	G	6: 60,921,557 (GRCm39)	K5E	probably benign	Het
Ncapd2	A	G	6: 125,162,804 (GRCm39)		probably benign	Het
Or2at4	A	T	7: 99,384,478 (GRCm39)	I43F	probably damaging	Het
Or7g18	A	T	9: 18,787,003 (GRCm39)	I127L	probably benign	Het
Pcnx3	T	C	19: 5,727,507 (GRCm39)	D644G	probably damaging	Het
Pole	T	C	5: 110,485,098 (GRCm39)	V2280A	probably benign	Het
Ptprf	T	A	4: 118,134,567 (GRCm39)	M24L	probably benign	Het
Sbno1	T	C	5: 124,542,282 (GRCm39)	N337S	probably damaging	Het
Serpinc1	T	A	1: 160,820,977 (GRCm39)	F141L	probably damaging	Het
Shroom3	C	A	5: 93,090,048 (GRCm39)	R933S	probably damaging	Het
Slc24a2	G	A	4: 87,146,033 (GRCm39)	P7L	probably benign	Het
Slc25a32	G	A	15: 38,961,002 (GRCm39)	T227I	probably damaging	Het
Slc7a1	A	G	5: 148,274,002 (GRCm39)	F396L	possibly damaging	Het
Smok2a	G	A	17: 13,445,377 (GRCm39)	R318H	probably benign	Het
Sntg2	A	G	12: 30,362,569 (GRCm39)	V59A	probably damaging	Het
Sspo	A	G	6: 48,454,558 (GRCm39)		probably null	Het
Tnfrsf1a	G	A	6: 125,333,827 (GRCm39)	V27I	probably damaging	Het
Tnpo3	T	C	6: 29,560,200 (GRCm39)	T648A	probably benign	Het
Tpbg	A	G	9: 85,727,252 (GRCm39)	Y407C	probably damaging	Het
Wbp2nl	A	T	15: 82,192,762 (GRCm39)	M149L	probably benign	Het
Yif1a	T	A	19: 5,141,625 (GRCm39)	M181K	probably benign	Het
Zkscan8	A	G	13: 21,710,729 (GRCm39)	L127S	probably damaging	Het

Other mutations in Mgat4d

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00542:Mgat4d	APN	8	84,081,425 (GRCm39)	missense	probably benign	0.21
IGL01634:Mgat4d	APN	8	84,094,745 (GRCm39)	missense	possibly damaging	0.71
IGL02084:Mgat4d	APN	8	84,095,610 (GRCm39)	missense	possibly damaging	0.72
R0546:Mgat4d	UTSW	8	84,082,350 (GRCm39)	missense	possibly damaging	0.94
R1322:Mgat4d	UTSW	8	84,092,354 (GRCm39)	missense	possibly damaging	0.74
R1526:Mgat4d	UTSW	8	84,095,666 (GRCm39)	missense	probably benign	0.25
R1617:Mgat4d	UTSW	8	84,092,340 (GRCm39)	missense	probably damaging	1.00
R2223:Mgat4d	UTSW	8	84,082,301 (GRCm39)	splice site	probably benign
R3157:Mgat4d	UTSW	8	84,081,450 (GRCm39)	missense	probably benign
R3421:Mgat4d	UTSW	8	84,084,772 (GRCm39)	missense	probably damaging	1.00
R3422:Mgat4d	UTSW	8	84,084,772 (GRCm39)	missense	probably damaging	1.00
R4387:Mgat4d	UTSW	8	84,098,335 (GRCm39)	missense	probably damaging	1.00
R4796:Mgat4d	UTSW	8	84,084,749 (GRCm39)	missense	probably damaging	1.00
R4805:Mgat4d	UTSW	8	84,084,787 (GRCm39)	splice site	probably null
R5054:Mgat4d	UTSW	8	84,094,837 (GRCm39)	splice site	probably null
R6366:Mgat4d	UTSW	8	84,095,580 (GRCm39)	splice site	probably null
R6927:Mgat4d	UTSW	8	84,081,496 (GRCm39)	missense	probably benign	0.03
R7053:Mgat4d	UTSW	8	84,098,261 (GRCm39)	missense	probably damaging	0.98
R7554:Mgat4d	UTSW	8	84,082,402 (GRCm39)	missense	probably benign	0.00
R7566:Mgat4d	UTSW	8	84,084,652 (GRCm39)	missense	probably damaging	1.00
R7965:Mgat4d	UTSW	8	84,084,722 (GRCm39)	missense	possibly damaging	0.95
R8111:Mgat4d	UTSW	8	84,094,776 (GRCm39)	missense	probably damaging	0.96
R8344:Mgat4d	UTSW	8	84,094,762 (GRCm39)	missense	probably benign	0.01
Z1176:Mgat4d	UTSW	8	84,094,741 (GRCm39)	missense	probably benign	0.39
Z1176:Mgat4d	UTSW	8	84,075,150 (GRCm39)	missense	probably benign	0.04

Posted On

2014-05-07