Incidental Mutation 'IGL01975:Trav13-2'
ID 182622
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Trav13-2
Ensembl Gene ENSMUSG00000076846
Gene Name T cell receptor alpha variable 13-2
Synonyms
Accession Numbers
Essential gene? Not available question?
Stock # IGL01975
Quality Score
Status
Chromosome 14
Chromosomal Location 53872345-53872856 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 53872823 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Serine at position 100 (T100S)
Ref Sequence ENSEMBL: ENSMUSP00000100435 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000103658]
AlphaFold A0A075B649
Predicted Effect possibly damaging
Transcript: ENSMUST00000103658
AA Change: T100S

PolyPhen 2 Score 0.955 (Sensitivity: 0.79; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000100435
Gene: ENSMUSG00000076846
AA Change: T100S

DomainStartEndE-ValueType
low complexity region 4 13 N/A INTRINSIC
IGv 38 109 1.55e-9 SMART
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 36 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adam22 C T 5: 8,217,396 (GRCm39) C133Y probably damaging Het
Akap3 G T 6: 126,850,963 (GRCm39) S827I probably damaging Het
Arhgap20 C T 9: 51,761,097 (GRCm39) Q947* probably null Het
Csf2rb2 A G 15: 78,173,086 (GRCm39) I258T probably benign Het
Egln2 T C 7: 26,859,745 (GRCm39) I323V possibly damaging Het
Erlin1 C A 19: 44,025,370 (GRCm39) G348V probably damaging Het
Fbxo38 C T 18: 62,648,484 (GRCm39) A685T probably damaging Het
Gm10272 G A 10: 77,542,608 (GRCm39) C50Y probably damaging Het
Gm11559 G T 11: 99,755,682 (GRCm39) Q110H unknown Het
Gpr75 T C 11: 30,841,835 (GRCm39) S247P probably benign Het
Grid1 A T 14: 35,045,383 (GRCm39) M409L probably benign Het
Herc3 A C 6: 58,893,561 (GRCm39) D941A possibly damaging Het
Ilf3 T A 9: 21,303,675 (GRCm39) S166T probably benign Het
Kcnu1 A C 8: 26,424,525 (GRCm39) E273D probably benign Het
Kdm8 A G 7: 125,051,529 (GRCm39) S41G probably benign Het
Ldlr G A 9: 21,644,993 (GRCm39) V174I probably benign Het
Lpar5 T C 6: 125,058,750 (GRCm39) L157P probably damaging Het
Mcrs1 A G 15: 99,141,559 (GRCm39) probably null Het
Ndst3 T A 3: 123,395,163 (GRCm39) Y489F possibly damaging Het
Or6c69c A G 10: 129,911,139 (GRCm39) I287V probably damaging Het
Palmd A T 3: 116,717,283 (GRCm39) S405T probably benign Het
Ptger1 T C 8: 84,396,149 (GRCm39) probably benign Het
Rbp3 A T 14: 33,680,602 (GRCm39) K1068M probably damaging Het
Rimbp2 T C 5: 128,874,712 (GRCm39) D293G probably benign Het
Rnf20 T A 4: 49,654,473 (GRCm39) D843E probably benign Het
Rxfp1 A G 3: 79,567,385 (GRCm39) S322P possibly damaging Het
Slc22a8 T A 19: 8,582,775 (GRCm39) I152N probably damaging Het
Slc6a21 T A 7: 44,937,275 (GRCm39) D268E probably benign Het
Sstr1 A G 12: 58,260,412 (GRCm39) N345S probably benign Het
Stx17 T C 4: 48,180,670 (GRCm39) S172P probably damaging Het
Syne1 A G 10: 5,018,908 (GRCm39) probably benign Het
Tpte A G 8: 22,839,353 (GRCm39) T467A probably damaging Het
Trappc12 A G 12: 28,742,491 (GRCm39) probably null Het
Trip12 A G 1: 84,792,534 (GRCm39) probably benign Het
Wdr36 A G 18: 32,985,541 (GRCm39) H486R probably damaging Het
Zswim5 T C 4: 116,822,889 (GRCm39) I453T probably benign Het
Other mutations in Trav13-2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00435:Trav13-2 APN 14 53,872,688 (GRCm39) missense possibly damaging 0.92
IGL02049:Trav13-2 APN 14 53,872,603 (GRCm39) missense probably damaging 0.98
IGL02049:Trav13-2 APN 14 53,872,602 (GRCm39) missense possibly damaging 0.85
IGL02049:Trav13-2 APN 14 53,872,604 (GRCm39) missense possibly damaging 0.92
IGL02977:Trav13-2 APN 14 53,872,764 (GRCm39) missense probably damaging 0.99
R4109:Trav13-2 UTSW 14 53,872,698 (GRCm39) missense probably benign
R7493:Trav13-2 UTSW 14 53,872,363 (GRCm39) missense possibly damaging 0.85
Posted On 2014-05-07