Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01982:Ranbp3l'

182775

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Ranbp3l

Ensembl Gene

ENSMUSG00000048424

Gene Name

RAN binding protein 3-like

Synonyms

C130037N17Rik

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.088) question?

Stock #

IGL01982

Quality Score

Status

Chromosome

Chromosomal Location

8997433-9067417 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 9058827 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glycine to Arginine at position 359 (G359R)

Ref Sequence

ENSEMBL: ENSMUSP00000055750 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000053308] [ENSMUST00000227191]

AlphaFold

Q6PDH4

Predicted Effect

probably damaging
Transcript: ENSMUST00000053308
AA Change: G359R

PolyPhen 2 Score 0.992 (Sensitivity: 0.70; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000055750
Gene: ENSMUSG00000048424
AA Change: G359R

Domain	Start	End	E-Value	Type
low complexity region	19	31	N/A	INTRINSIC
low complexity region	118	129	N/A	INTRINSIC
low complexity region	191	197	N/A	INTRINSIC
RanBD	302	430	4.52e-13	SMART

Predicted Effect

possibly damaging
Transcript: ENSMUST00000227191
AA Change: G223R

PolyPhen 2 Score 0.831 (Sensitivity: 0.84; Specificity: 0.93)

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 67 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca12	A	C	1: 71,385,857 (GRCm39)	S254A	probably benign	Het
Abca7	T	G	10: 79,838,475 (GRCm39)	L583R	probably damaging	Het
Acp1	A	T	12: 30,961,491 (GRCm39)	L14H	possibly damaging	Het
Adar	A	G	3: 89,645,397 (GRCm39)	I3V	probably benign	Het
Adh4	C	T	3: 138,134,788 (GRCm39)		probably benign	Het
Aldh1l1	A	G	6: 90,536,845 (GRCm39)	I103V	probably benign	Het
Asic3	C	A	5: 24,622,719 (GRCm39)	T523N	probably benign	Het
Aspm	T	C	1: 139,419,326 (GRCm39)	V1732A	probably benign	Het
Atad3a	C	T	4: 155,838,384 (GRCm39)	R211Q	possibly damaging	Het
Bahcc1	A	G	11: 120,178,299 (GRCm39)	Y2286C	probably damaging	Het
BC034090	T	C	1: 155,099,078 (GRCm39)	E569G	probably damaging	Het
Bpifb3	A	G	2: 153,767,521 (GRCm39)	N237S	probably benign	Het
Bysl	C	A	17: 47,921,996 (GRCm39)		probably null	Het
C2cd6	T	C	1: 59,106,932 (GRCm39)		probably benign	Het
Ccdc141	A	G	2: 76,861,003 (GRCm39)	F925L	probably damaging	Het
Cdca2	A	T	14: 67,915,168 (GRCm39)	V697E	probably damaging	Het
Cers1	A	G	8: 70,776,081 (GRCm39)	D324G	probably damaging	Het
Ctsq	T	A	13: 61,186,732 (GRCm39)	I91F	probably benign	Het
Ctsq	C	T	13: 61,187,335 (GRCm39)	C11Y	probably benign	Het
Cyp11b1	T	C	15: 74,711,252 (GRCm39)	N142S	possibly damaging	Het
Cyp3a59	G	T	5: 146,041,545 (GRCm39)	S363I	probably benign	Het
Eps15l1	A	T	8: 73,132,919 (GRCm39)	D567E	probably benign	Het
Esf1	G	A	2: 140,006,448 (GRCm39)	A233V	probably benign	Het
Fras1	A	T	5: 96,887,107 (GRCm39)	I2630F	possibly damaging	Het
Fyb1	A	T	15: 6,609,658 (GRCm39)	E77V	probably null	Het
Gjb6	C	A	14: 57,362,030 (GRCm39)	W77L	probably damaging	Het
Gm21983	A	G	7: 26,879,703 (GRCm39)	V88A	possibly damaging	Het
Gm8247	A	G	14: 44,823,088 (GRCm39)	T52A	probably damaging	Het
Gpr108	T	C	17: 57,544,877 (GRCm39)	K329E	probably damaging	Het
Gpr141	T	A	13: 19,935,908 (GRCm39)	H289L	probably benign	Het
Ilvbl	T	C	10: 78,414,856 (GRCm39)	Y240H	probably damaging	Het
Kntc1	G	A	5: 123,947,159 (GRCm39)	A1868T	probably benign	Het
Lrmda	A	C	14: 22,634,550 (GRCm39)	N112T	probably damaging	Het
Ly75	T	C	2: 60,142,108 (GRCm39)	Y1334C	probably damaging	Het
Macc1	C	A	12: 119,409,369 (GRCm39)	P46T	probably benign	Het
Madd	A	T	2: 91,006,052 (GRCm39)	F381Y	probably damaging	Het
Map3k20	C	T	2: 72,128,677 (GRCm39)	Q38*	probably null	Het
Mcm4	A	T	16: 15,448,284 (GRCm39)	D424E	possibly damaging	Het
Micu1	T	A	10: 59,699,100 (GRCm39)	M463K	possibly damaging	Het
Mkrn2os	A	G	6: 115,562,492 (GRCm39)	L157P	probably damaging	Het
Nectin2	A	G	7: 19,451,487 (GRCm39)	S516P	probably damaging	Het
Nme5	T	A	18: 34,702,928 (GRCm39)	D120V	probably damaging	Het
Npy4r	T	C	14: 33,869,282 (GRCm39)	N2S	possibly damaging	Het
Nup107	A	T	10: 117,595,245 (GRCm39)		probably benign	Het
Omd	T	C	13: 49,742,973 (GRCm39)	Y8H	possibly damaging	Het
Phf8-ps	T	G	17: 33,285,289 (GRCm39)	E504D	probably benign	Het
Ppp1r15a	T	C	7: 45,173,803 (GRCm39)		probably benign	Het
Ppp2ca	T	C	11: 51,989,891 (GRCm39)	F6L	probably benign	Het
Rab1a	T	C	11: 20,174,717 (GRCm39)	S97P	probably benign	Het
Rnf213	A	T	11: 119,334,094 (GRCm39)	H3101L	probably damaging	Het
Slc27a4	T	C	2: 29,702,627 (GRCm39)	F509S	probably damaging	Het
Slco4a1	T	C	2: 180,114,946 (GRCm39)	V623A	probably benign	Het
Spart	T	A	3: 55,035,911 (GRCm39)		probably null	Het
Sptan1	A	G	2: 29,909,980 (GRCm39)	D1780G	probably damaging	Het
Tgm7	G	T	2: 120,924,106 (GRCm39)	Y605*	probably null	Het
Tmem106b	T	C	6: 13,071,968 (GRCm39)		probably benign	Het
Trak2	G	A	1: 58,965,814 (GRCm39)	A120V	possibly damaging	Het
Trappc8	G	A	18: 21,007,769 (GRCm39)		probably benign	Het
Trim66	T	C	7: 109,057,970 (GRCm39)	T973A	probably benign	Het
Ttyh3	C	A	5: 140,621,829 (GRCm39)		probably benign	Het
Ugt2b37	A	C	5: 87,390,291 (GRCm39)	I385S	probably damaging	Het
Usf3	A	G	16: 44,039,180 (GRCm39)	N1220S	possibly damaging	Het
Utrn	A	T	10: 12,623,773 (GRCm39)	I155N	probably damaging	Het
Vps13b	C	T	15: 35,439,050 (GRCm39)	Q377*	probably null	Het
Washc2	A	T	6: 116,213,150 (GRCm39)	E570D	probably benign	Het
Wscd1	T	C	11: 71,657,699 (GRCm39)	V168A	possibly damaging	Het
Zfp386	T	A	12: 116,022,788 (GRCm39)	C169S	probably benign	Het

Other mutations in Ranbp3l

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01746:Ranbp3l	APN	15	9,063,167 (GRCm39)	nonsense	probably null
IGL02549:Ranbp3l	APN	15	8,997,925 (GRCm39)	missense	possibly damaging	0.66
IGL03170:Ranbp3l	APN	15	9,029,611 (GRCm39)	missense	probably damaging	1.00
IGL03338:Ranbp3l	APN	15	9,060,940 (GRCm39)	missense	probably damaging	1.00
PIT4791001:Ranbp3l	UTSW	15	9,060,829 (GRCm39)	missense	probably damaging	1.00
R0137:Ranbp3l	UTSW	15	9,063,067 (GRCm39)	missense	probably damaging	1.00
R0383:Ranbp3l	UTSW	15	9,063,184 (GRCm39)	missense	possibly damaging	0.48
R0699:Ranbp3l	UTSW	15	9,058,850 (GRCm39)	critical splice donor site	probably null
R1517:Ranbp3l	UTSW	15	9,065,081 (GRCm39)	nonsense	probably null
R1629:Ranbp3l	UTSW	15	9,065,068 (GRCm39)	missense	probably damaging	0.99
R1922:Ranbp3l	UTSW	15	9,057,206 (GRCm39)	missense	probably damaging	1.00
R2058:Ranbp3l	UTSW	15	9,029,641 (GRCm39)	missense	probably damaging	1.00
R2265:Ranbp3l	UTSW	15	9,057,194 (GRCm39)	missense	probably damaging	0.99
R2512:Ranbp3l	UTSW	15	8,997,949 (GRCm39)	missense	probably benign	0.00
R4077:Ranbp3l	UTSW	15	9,060,838 (GRCm39)	missense	probably damaging	1.00
R4079:Ranbp3l	UTSW	15	9,060,838 (GRCm39)	missense	probably damaging	1.00
R4179:Ranbp3l	UTSW	15	9,057,279 (GRCm39)	missense	possibly damaging	0.62
R5227:Ranbp3l	UTSW	15	9,037,186 (GRCm39)	missense	probably damaging	0.99
R5265:Ranbp3l	UTSW	15	9,037,077 (GRCm39)	missense	probably benign	0.01
R5722:Ranbp3l	UTSW	15	9,029,656 (GRCm39)	missense	probably damaging	0.98
R5751:Ranbp3l	UTSW	15	9,063,169 (GRCm39)	missense	probably damaging	1.00
R5976:Ranbp3l	UTSW	15	9,030,916 (GRCm39)	missense	possibly damaging	0.85
R6504:Ranbp3l	UTSW	15	8,997,946 (GRCm39)	missense	probably benign	0.27
R6850:Ranbp3l	UTSW	15	9,058,808 (GRCm39)	missense	probably damaging	1.00
R6940:Ranbp3l	UTSW	15	9,041,792 (GRCm39)	missense	probably benign	0.03
R7009:Ranbp3l	UTSW	15	9,063,064 (GRCm39)	missense	probably damaging	1.00
R7018:Ranbp3l	UTSW	15	9,037,159 (GRCm39)	missense	probably benign	0.00
R7019:Ranbp3l	UTSW	15	9,057,241 (GRCm39)	missense	probably damaging	0.99
R7250:Ranbp3l	UTSW	15	9,041,853 (GRCm39)	missense	probably benign
R7352:Ranbp3l	UTSW	15	8,997,842 (GRCm39)	start gained	probably benign
R7483:Ranbp3l	UTSW	15	9,030,955 (GRCm39)	missense	possibly damaging	0.86
R8210:Ranbp3l	UTSW	15	9,065,059 (GRCm39)	missense	probably benign	0.00
R9255:Ranbp3l	UTSW	15	9,057,293 (GRCm39)	missense	probably benign	0.00
R9389:Ranbp3l	UTSW	15	9,057,304 (GRCm39)	missense	probably damaging	1.00
R9511:Ranbp3l	UTSW	15	9,041,991 (GRCm39)	intron	probably benign
R9513:Ranbp3l	UTSW	15	9,037,176 (GRCm39)	nonsense	probably null

Posted On

2014-05-07